Magee1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 74,254,848 - 74,258,395 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 70,189,242 - 70,192,789 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 70,189,187 - 70,192,810 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 71,698,216 - 71,701,763 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 75,198,504 - 75,202,051 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 72,761,663 - 72,765,210 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 76,083,553 - 76,087,100 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 76,083,549 - 76,087,117 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 76,881,860 - 76,885,407 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 93,192,218 - 93,195,765 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | X | 71,522,118 - 71,525,665 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q22 | NCBI | | | | |
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MAGEE1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 76,427,710 - 76,431,342 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 76,427,710 - 76,431,342 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 75,648,103 - 75,651,735 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 75,564,521 - 75,568,148 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 75,430,816 - 75,434,444 | NCBI | | | | | Celera | X | 75,927,786 - 75,931,486 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q13.3 | NCBI | | | | | HuRef | X | 69,280,072 - 69,283,772 (+) | NCBI | | HuRef | | | CHM1_1 | X | 75,540,855 - 75,544,555 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 74,861,510 - 74,865,142 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Magee1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 104,163,984 - 104,167,567 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 104,163,984 - 104,167,533 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 105,120,378 - 105,123,961 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 105,120,378 - 105,123,927 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 102,315,735 - 102,319,251 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 101,323,140 - 101,326,646 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 91,984,292 - 91,987,808 (+) | NCBI | | Celera | | | Cytogenetic Map | X | D | NCBI | | | | | cM Map | X | 46.84 | NCBI | | | | |
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Magee1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955557 | 60,440 - 170,159 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MAGEE1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 76,053,663 - 76,057,378 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 76,057,274 - 76,060,995 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 65,654,865 - 65,658,586 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 75,769,347 - 75,772,734 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 75,769,619 - 75,772,870 (+) | Ensembl | panpan1.1 | | panPan2 | |
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LOC102153919 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | X | 117,717,968 - 117,724,242 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 103,578,079 - 103,584,623 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 119,879,472 - 119,886,381 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | X | 116,907,310 - 116,914,195 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 119,477,559 - 119,483,661 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 119,385,390 - 119,392,296 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Magee1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | X | 42,934,661 - 42,938,826 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936683 | 2,009,167 - 2,012,570 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936683 | 2,008,949 - 2,013,104 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MAGEE1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | X | 65,650,548 - 65,653,774 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 65,650,809 - 65,653,682 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666067 | 15,917,231 - 15,920,917 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Magee1 (Heterocephalus glaber - naked mole-rat) |
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