Rps7l1 (ribosomal protein S7 like 1) - Rat Genome Database

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Gene: Rps7l1 (ribosomal protein S7 like 1) Rattus norvegicus
Analyze
Symbol: Rps7l1
Name: ribosomal protein S7 like 1
RGD ID: 1559461
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 40S ribosomal protein S7-like; LOC289932; RGD1559461; similar to 40S ribosomal protein S7 (S8); small ribosomal subunit protein eS7-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81511,804,314 - 11,804,908 (+)NCBIGRCr8
mRatBN7.2159,373,574 - 9,374,184 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01510,631,477 - 10,632,040 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01514,675,484 - 14,676,120 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41510,892,194 - 10,928,859 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera159,405,372 - 9,405,935 (+)NCBICelera
Cytogenetic Map15p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Rps7l1
2 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15105825014481294Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)colorectal tumor number (CMO:0001794)15226636822711984Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_039094023   ⟹   XP_038949951
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81511,804,314 - 11,804,908 (+)NCBI
mRatBN7.2159,373,574 - 9,374,184 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038949951 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_038949951   ⟸   XM_039094023


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-14425 BioCyc
NCBI Gene 289932 ENTREZGENE
PhenoGen Rps7l1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Rps7l1  ribosomal protein S7 like 1  RGD1559461  similar to 40S ribosomal protein S7 (S8)  Symbol and Name Changed 1299863 APPROVED
2008-04-30 RGD1559461  similar to 40S ribosomal protein S7 (S8)   RGD1559461_predicted  similar to 40S ribosomal protein S7 (S8) (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1559461_predicted  similar to 40S ribosomal protein S7 (S8) (predicted)  LOC289932  similar to 40S ribosomal protein S7 (S8)  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC289932  similar to 40S ribosomal protein S7 (S8)      Symbol and Name status set to provisional 70820 PROVISIONAL