Gstm4 (glutathione S-transferase, mu 4) - Rat Genome Database

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Gene: Gstm4 (glutathione S-transferase, mu 4) Mus musculus
Analyze
Symbol: Gstm4
Name: glutathione S-transferase, mu 4
RGD ID: 1557217
MGI Page MGI
Description: Enables glutathione transferase activity. Acts upstream of or within nitrobenzene metabolic process and xenobiotic catabolic process. Predicted to be located in cytosol and intercellular bridge. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and nose. Orthologous to human GSTM4 (glutathione S-transferase mu 4).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110004G14Rik; glutathione S-transferase mu 4; glutathione transferase GSTM7-7; glutathione-S-transferase, mu 4; GST class-mu 4; Gstb; Gstb-; Gstb-4; Gstb4; GSTM4-4; GSTM7-7; leukotriene C4 synthase GSTM4; MGC40906
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm29700   Gm4845  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393107,937,887 - 107,952,495 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3107,947,724 - 107,952,210 (-)EnsemblGRCm39 Ensembl
GRCm383108,030,571 - 108,045,179 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3108,040,408 - 108,044,894 (-)EnsemblGRCm38mm10GRCm38
MGSCv373107,843,326 - 107,847,777 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363108,168,464 - 108,172,845 (-)NCBIMGSCv36mm8
Celera3110,373,991 - 110,378,442 (-)NCBICelera
Cytogenetic Map3F2.3NCBI
cM Map346.83NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
1H-pyrazole  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3-chloropropane-1,2-diol  (ISO)
4-amino-2,6-dinitrotoluene  (ISO)
8'-apo-beta,psi-caroten-8'-al  (ISO)
8-Br-cAMP  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
alpha-hexachlorocyclohexane  (ISO)
ammonium chloride  (ISO)
andrographolide  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
artesunate  (ISO)
atazanavir sulfate  (ISO)
atrazine  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
beta-carotene  (ISO)
beta-naphthoflavone  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bortezomib  (ISO)
butylated hydroxyanisole  (EXP)
C60 fullerene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cadmium sulfate  (EXP)
carbon nanotube  (EXP)
chenodeoxycholic acid  (ISO)
chlordecone  (EXP)
chlorpyrifos  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
cyclosporin A  (EXP,ISO)
cyproconazole  (EXP)
deoxycholic acid  (ISO)
Diallyl sulfide  (EXP,ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibenzofurans  (EXP)
dichloroacetic acid  (EXP)
diclofenac  (ISO)
dieldrin  (ISO)
diquat  (EXP)
epoxiconazole  (EXP)
ethanol  (EXP)
ethoxyquin  (EXP)
etoposide  (ISO)
fenthion  (EXP)
finasteride  (ISO)
flutamide  (ISO)
furan  (ISO)
glutathione  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
Hexachloro-1,3-butadiene  (ISO)
indole-3-methanol  (ISO)
inulin  (EXP)
methotrexate  (ISO)
microcystin-LR  (EXP)
mitomycin C  (ISO)
monosodium L-glutamate  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
naphthalene  (EXP)
nefazodone  (ISO)
nickel atom  (ISO)
nimesulide  (ISO)
ochratoxin A  (ISO)
oltipraz  (EXP)
orphenadrine  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
pentachlorophenol  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP)
permethrin  (EXP)
phenformin  (ISO)
phenobarbital  (EXP,ISO)
PhIP  (ISO)
phlorizin  (EXP)
piperonyl butoxide  (EXP)
pirinixic acid  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (EXP,ISO)
quercetin  (ISO)
rotenone  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (EXP)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP)
triadimefon  (ISO)
trichloroethene  (ISO)
urethane  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)
cytosol  (ISO,TAS)
intercellular bridge  (ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8512323   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11991805   PMID:12069689   PMID:12477932   PMID:14681479   PMID:16141072   PMID:16141073  
PMID:16549767   PMID:16842493   PMID:21267068   PMID:21873635   PMID:24194600   PMID:27626380  


Genomics

Comparative Map Data
Gstm4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393107,937,887 - 107,952,495 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3107,947,724 - 107,952,210 (-)EnsemblGRCm39 Ensembl
GRCm383108,030,571 - 108,045,179 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3108,040,408 - 108,044,894 (-)EnsemblGRCm38mm10GRCm38
MGSCv373107,843,326 - 107,847,777 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363108,168,464 - 108,172,845 (-)NCBIMGSCv36mm8
Celera3110,373,991 - 110,378,442 (-)NCBICelera
Cytogenetic Map3F2.3NCBI
cM Map346.83NCBI
GSTM4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381109,656,099 - 109,667,727 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1109,656,099 - 109,665,496 (+)EnsemblGRCh38hg38GRCh38
GRCh371110,198,721 - 110,208,119 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361110,000,226 - 110,009,648 (+)NCBINCBI36Build 36hg18NCBI36
Celera1108,463,772 - 108,473,180 (+)NCBICelera
Cytogenetic Map1p13.3NCBI
HuRef1108,086,984 - 108,096,416 (+)NCBIHuRef
CHM1_11110,313,519 - 110,322,944 (+)NCBICHM1_1
T2T-CHM13v2.01109,684,537 - 109,696,166 (+)NCBIT2T-CHM13v2.0
Gstm4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82198,356,114 - 198,373,487 (-)NCBIGRCr8
mRatBN7.22195,667,940 - 195,685,315 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2195,680,004 - 195,685,323 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2203,322,478 - 203,327,732 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02201,204,594 - 201,209,850 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02196,021,555 - 196,026,811 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02210,834,013 - 210,839,242 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2210,833,884 - 210,839,295 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02230,302,889 - 230,308,113 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42203,605,593 - 203,610,817 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2188,325,385 - 188,330,613 (-)NCBICelera
Cytogenetic Map2q34NCBI
Gstm4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543513,063,966 - 13,210,264 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543513,064,691 - 13,069,734 (+)NCBIChiLan1.0ChiLan1.0
GSTM4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21117,629,559 - 117,648,713 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11116,774,969 - 116,808,377 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01112,033,462 - 112,337,606 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11111,261,585 - 111,270,912 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1111,261,585 - 111,270,919 (+)Ensemblpanpan1.1panPan2
LOC479912
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1642,201,697 - 42,207,886 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha644,977,327 - 44,983,514 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0642,533,367 - 42,539,560 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl642,534,290 - 42,539,704 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1642,266,138 - 42,272,342 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0642,223,891 - 42,230,078 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0642,658,872 - 42,665,063 (-)NCBIUU_Cfam_GSD_1.0
LOC101958900
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505818,963,655 - 18,971,183 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367041,143,010 - 1,148,567 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367041,142,990 - 1,150,491 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC106510200
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.14110,378,016 - 110,413,483 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24120,750,531 - 120,784,580 (-)NCBISscrofa10.2Sscrofa10.2susScr3

Variants

.
Variants in Gstm4
438 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:900
Count of miRNA genes:386
Interacting mature miRNAs:428
Transcripts:ENSMUST00000029489, ENSMUST00000106670, ENSMUST00000178808
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
13208566Bmiq5_mbody mass index QTL 5 (mouse)340954435115793649Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
1300595Tmevd2_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse)Not determined375463302109463549Mouse
1301392Eae3_msusceptibility to experimental allergic encephalomyelitis 3 (mouse)Not determined379548730113548837Mouse
1301947Pcfm3_mperiosteal circumference and femur length 3 (mouse)Not determined381084652115084797Mouse
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
11039510Ltpr3d_mLeishmania tropica response 3d (mouse)383463991117464137Mouse
11039511Ltpr3c_mLeishmania tropica response 3c (mouse)383463991117464137Mouse
11039507Ltpr3g_mLeishmania tropica response 3g (mouse)383463991117464137Mouse
11039508Ltpr3f_mLeishmania tropica response 3f (mouse)383463991117464137Mouse
11039509Ltpr3e_mLeishmania tropica response 3e (mouse)383463991117464137Mouse
11039512Ltpr3b_mLeishmania tropica response 3b (mouse)383463991117464137Mouse
1301272Cfsw1_mcystic fibrosis survival to weaning 1 (mouse)Not determined383882912117883044Mouse
4142099Cq3_mcholesterol QTL 3 (mouse)Not determined384888918118889067Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse
1357583Sle18_msystematic lupus erythematosus susceptibility 18 (mouse)Not determined387208904125316236Mouse
12738440Twq3_mtestis weight QTL 3 (mouse)387228015121228015Mouse
4142178Ctrq2_mC. trachomatis resistance QTL 2 (mouse)Not determined389139967137453008Mouse
10766455Sle22_msystematic lupus erythematosus susceptibility 22 (mouse)390376936124377072Mouse
14747001Mancz4_mmandible centroid size 4 (mouse)390378017124378017Mouse
1302052Etohcta4_methanol conditioned taste aversion 4 (mouse)Not determined391000105125008748Mouse
1301349Pgia26_mproteoglycan induced arthritis 26 (mouse)Not determined392251533126251650Mouse
27226732Tibmd3_mtibia midshaft diameter 3, 10 week (mouse)396607316147805636Mouse
10043955Wt10q4_mbody weight, 10 weeks, QTL 4 (mouse)Not determined398624041132624197Mouse
11533920Mvb3_mmodifier of vibrator 3 (mouse)398635284132635383Mouse
12792984Modn1_mmodifier of Dstn neovascularization 1 (mouse)398635284132635383Mouse
1302114Tbs1_mtuberculosis severity 1 (mouse)Not determined398924105132924250Mouse
1300752Ap6q_malcohol preference 6 QTL (mouse)Not determined3100372912147045722Mouse
26884419Bzwq6_mbi-zygomatic width QTL 6, 10 week (mouse)3100607316137205761Mouse
27226733Tibmd6_mtibia midshaft diameter 6, 16 week (mouse)3101307316149805637Mouse
1301805Mors2_mmodifier of obesity related sterility 2 (mouse)Not determined3103482659137482783Mouse
1357599msrvh1_mmodifier of susceptibility to renal vascular hypertrophy/hyperplasia 1 (mouse)Not determined3107376936115624197Mouse
8655599Cia5c_mcollagen induced arthritis QTL 5c (mouse)Not determined3107376936125316237Mouse
1302093Orgwq5_morgan weight QTL 5 (mouse)Not determined3107376936147304689Mouse

Markers in Region
Gstm4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383108,040,549 - 108,042,221UniSTSGRCm38
MGSCv373107,843,467 - 107,845,139UniSTSGRCm37
Celera3110,374,132 - 110,375,804UniSTS
Cytogenetic Map3F2.3UniSTS
cM Map3 UniSTS
UniSTS:234800  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383108,040,455 - 108,040,686UniSTSGRCm38
MGSCv373107,843,373 - 107,843,604UniSTSGRCm37
Celera3110,374,038 - 110,374,269UniSTS
Cytogenetic Map3F2.3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001160411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF464943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF501320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI842977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL671877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX524259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY289676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK335113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000029489   ⟹   ENSMUSP00000029489
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3107,947,724 - 107,952,210 (-)Ensembl
GRCm38.p6 Ensembl3108,040,408 - 108,044,894 (-)Ensembl
RefSeq Acc Id: ENSMUST00000106670   ⟹   ENSMUSP00000102281
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3107,948,453 - 107,952,182 (-)Ensembl
GRCm38.p6 Ensembl3108,041,137 - 108,044,866 (-)Ensembl
RefSeq Acc Id: ENSMUST00000178808   ⟹   ENSMUSP00000136643
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3107,947,726 - 107,952,175 (-)Ensembl
GRCm38.p6 Ensembl3108,040,410 - 108,044,859 (-)Ensembl
RefSeq Acc Id: NM_001160411   ⟹   NP_001153883
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393107,947,724 - 107,952,175 (-)NCBI
GRCm383108,040,408 - 108,044,859 (-)NCBI
MGSCv373107,843,326 - 107,847,777 (-)RGD
Celera3110,373,991 - 110,378,442 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_026764   ⟹   NP_081040
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393107,947,724 - 107,952,172 (-)NCBI
GRCm383108,040,408 - 108,044,856 (-)NCBI
MGSCv373107,843,326 - 107,847,777 (-)RGD
Celera3110,373,991 - 110,378,442 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006501018   ⟹   XP_006501081
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393107,947,724 - 107,952,193 (-)NCBI
GRCm383108,040,408 - 108,044,877 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006501020   ⟹   XP_006501083
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393107,947,724 - 107,952,495 (-)NCBI
GRCm383108,040,408 - 108,045,179 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006501021   ⟹   XP_006501084
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393107,947,724 - 107,952,321 (-)NCBI
GRCm383108,040,408 - 108,045,005 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319462   ⟹   XP_017174951
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393107,937,887 - 107,952,189 (-)NCBI
GRCm383108,030,571 - 108,044,867 (-)NCBI
Sequence:
RefSeq Acc Id: NP_081040   ⟸   NM_026764
- Peptide Label: isoform 1
- UniProtKB: Q8R5I6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001153883   ⟸   NM_001160411
- Peptide Label: isoform 2
- UniProtKB: A2AE91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006501083   ⟸   XM_006501020
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006501084   ⟸   XM_006501021
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006501081   ⟸   XM_006501018
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017174951   ⟸   XM_017319462
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSMUSP00000136643   ⟸   ENSMUST00000178808
RefSeq Acc Id: ENSMUSP00000029489   ⟸   ENSMUST00000029489
RefSeq Acc Id: ENSMUSP00000102281   ⟸   ENSMUST00000106670
Protein Domains
GST C-terminal   GST N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8R5I6-F1-model_v2 AlphaFold Q8R5I6 1-218 view protein structure

Promoters
RGD ID:6833923
Promoter ID:MM_KWN:35747
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000106670,   NM_001160411,   OTTMUST00000016577
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv363107,847,601 - 107,848,101 (-)MPROMDB
RGD ID:6882044
Promoter ID:EPDNEW_M4473
Type:multiple initiation site
Name:Gstm4_2
Description:Mus musculus glutathione S-transferase, mu 4 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4474  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383108,044,700 - 108,044,760EPDNEW
RGD ID:6882046
Promoter ID:EPDNEW_M4474
Type:initiation region
Name:Gstm4_1
Description:Mus musculus glutathione S-transferase, mu 4 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4473  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383108,044,866 - 108,044,926EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95862 AgrOrtholog
Ensembl Genes ENSMUSG00000027890 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000029489 ENTREZGENE
  ENSMUST00000029489.15 UniProtKB/Swiss-Prot
  ENSMUST00000106670 ENTREZGENE
  ENSMUST00000106670.2 UniProtKB/TrEMBL
  ENSMUST00000178808 ENTREZGENE
  ENSMUST00000178808.8 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1050.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glutaredoxin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Glutathione-S-Trfase_C-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glutathione-S-Trfase_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glutathione_S-Trfase UniProtKB/TrEMBL
  Glutathione_S-Trfase_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GST_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GST_mu UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14865 UniProtKB/Swiss-Prot
MGD MGI:95862 ENTREZGENE
NCBI Gene 14865 ENTREZGENE
PANTHER GLUTATHIONE S-TRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GLUTATHIONE S-TRANSFERASE MU 4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GST_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GST_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gstm4 PhenoGen
PRINTS GSTRNSFRASEM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE GST_CTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GST_NTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47616 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52833 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AE91 ENTREZGENE, UniProtKB/TrEMBL
  GSTM4_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE