Hsp90aa1 (heat shock protein 90, alpha (cytosolic), class A member 1) - Rat Genome Database

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Gene: Hsp90aa1 (heat shock protein 90, alpha (cytosolic), class A member 1) Mus musculus
Analyze
Symbol: Hsp90aa1
Name: heat shock protein 90, alpha (cytosolic), class A member 1
RGD ID: 1553279
MGI Page MGI
Description: Enables identical protein binding activity; nitric-oxide synthase regulator activity; and protein folding chaperone. Involved in several processes, including cellular response to heat; positive regulation of nitric oxide biosynthetic process; and protein folding. Located in several cellular components, including growth cone; neuronal cell body; and perinuclear region of cytoplasm. Part of protein-containing complex. Is expressed in several structures, including 1st branchial arch; alimentary system; eye; genitourinary system; and nervous system. Orthologous to human HSP90AA1 (heat shock protein 90 alpha family class A member 1).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 86kDa; 89kDa; AL024080; AL024147; heat shock 86 kDa; heat shock protein 1, alpha; heat shock protein 90kDa alpha (cytosolic), class A member 1; heat shock protein HSP 90-alpha; heat shock protein, 1; heat shock protein, 86 kDa 1; heat shock protein, 89 kDa; hs; Hsp; HSP 86; hsp4; HSP86; Hsp86-1; Hsp89; Hsp90; Hspca; TSTA; tumor-specific transplantation 86 kDa antigen
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm12346   Gm14800   Gm14912   Gm14914   Gm15937   Gm16107   Gm19133   Gm19136   Gm19143   Gm5511   Gm5844   Gm9319   Gm9557  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912110,657,470 - 110,662,829 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12110,657,039 - 110,669,162 (-)EnsemblGRCm39 Ensembl
GRCm3812110,691,036 - 110,696,395 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12110,690,605 - 110,702,728 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712111,929,246 - 111,934,605 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612111,138,843 - 111,144,202 (-)NCBIMGSCv36mm8
Celera12111,881,002 - 111,886,365 (-)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1260.75NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
(S)-amphetamine  (EXP)
(S)-nicotine  (EXP,ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (EXP,ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
1H-pyrazole  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-amino-4,6-dinitrotoluene  (ISO)
2-deoxy-D-glucose  (ISO)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
3-phenylprop-2-enal  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-amino-2,6-dinitrotoluene  (ISO)
4-hydroxynon-2-enal  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-anilino-5,8-quinolinedione  (ISO)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
ADP  (EXP)
alachlor  (ISO)
albendazole  (ISO)
aldehydo-D-glucose  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (ISO)
antimycin A  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
ATP  (EXP)
azoxystrobin  (ISO)
BAPTA  (ISO)
benzene-1,2,4-triol  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
bleomycin A2  (ISO)
bortezomib  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
cadmium sulfate  (ISO)
caffeine  (EXP,ISO)
calcium atom  (EXP)
calcium(0)  (EXP)
cannabidiol  (ISO)
captan  (EXP)
carbamazepine  (ISO)
carbon nanotube  (EXP)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (ISO)
cefaloridine  (ISO)
celastrol  (ISO)
chloromethylisothiazolinone  (ISO)
chloropicrin  (ISO)
chlorpyrifos  (EXP,ISO)
chromium(6+)  (EXP)
cisplatin  (EXP,ISO)
clofibrate  (EXP,ISO)
clonidine  (ISO)
clonidine (amino form)  (ISO)
clonidine (imino form)  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
corn oil  (EXP)
coumarin  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
Cruentaren A  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
curcumin  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
cyfluthrin  (ISO)
cylindrospermopsin  (ISO)
D-glucose  (ISO)
deguelin  (ISO)
dexamethasone  (ISO)
dextran sulfate  (ISO)
diarsenic trioxide  (ISO)
dibenzo[a,l]pyrene  (EXP)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
dioxygen  (ISO)
disulfiram  (ISO)
diuron  (ISO)
doxorubicin  (EXP,ISO)
elemental selenium  (ISO)
endrin  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
etoposide  (ISO)
felbamate  (ISO)
fenofibrate  (EXP)
fenthion  (ISO)
fenvalerate  (ISO)
finasteride  (ISO)
flutamide  (ISO)
folic acid  (EXP)
FR900359  (ISO)
fulvestrant  (EXP,ISO)
furan  (EXP)
gabapentin  (ISO)
gallic acid  (ISO)
gedunin  (ISO)
gefitinib  (ISO)
geldanamycin  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glucose  (ISO)
glyphosate  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
hypochlorous acid  (EXP)
Indeno[1,2,3-cd]pyrene  (EXP)
indoles  (ISO)
indometacin  (ISO)
iodide salt  (ISO)
iron(2+) sulfate (anhydrous)  (ISO)
iron(III) nitrilotriacetate  (ISO)
isoprenaline  (EXP)
ivermectin  (ISO)
kojic acid  (ISO)
lead diacetate  (EXP)
leflunomide  (ISO)
linalool  (ISO)
maneb  (EXP)
melatonin  (EXP)
mercury atom  (ISO)
mercury(0)  (ISO)
methamphetamine  (EXP,ISO)
methidathion  (EXP)
methoxychlor  (ISO)
methylisothiazolinone  (ISO)
methylparaben  (ISO)
Mitotane  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-methyl-N'-nitro-N-nitrosoguanidine  (EXP)
N-nitrosodiethylamine  (ISO)
nefazodone  (ISO)
nickel atom  (EXP)
nickel subsulfide  (ISO)
nicotine  (EXP,ISO)
nimesulide  (ISO)
nitrogen dioxide  (ISO)
Nonidet P-40  (ISO)
ochratoxin A  (ISO)
organoselenium compound  (ISO)
oxybenzone  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
paraoxon  (ISO)
paraquat  (EXP)
PCB138  (ISO)
pentachlorophenol  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
phenethyl isothiocyanate  (ISO)
phenformin  (ISO)
phenobarbital  (EXP,ISO)
PhIP  (ISO)
phlorizin  (EXP)
picoxystrobin  (ISO)
piperonyl butoxide  (ISO)
pirinixic acid  (EXP,ISO)
poly(I:C)  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (EXP)
propiconazole  (EXP)
prostaglandin A1  (EXP)
protoporphyrin  (ISO)
pyrogallol  (EXP)
quercetin  (ISO)
quercitrin  (ISO)
rimonabant  (EXP)
ritonavir  (EXP)
rotenone  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
silver(1+) nitrate  (ISO)
simvastatin  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
sodium fluoride  (EXP)
streptozocin  (ISO)
sulforaphane  (ISO)
sulpiride  (ISO)
T-2 toxin  (ISO)
tamoxifen  (EXP,ISO)
tanespimycin  (ISO)
tebufenpyrad  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
thiopental  (ISO)
titanium dioxide  (EXP,ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triphenylstannane  (ISO)
Triptolide  (EXP)
tunicamycin  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
zebularine  (ISO)
zinc atom  (ISO)
zinc pyrithione  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activation of innate immune response  (ISO)
cardiac muscle cell apoptotic process  (ISO)
cellular response to heat  (IBA,IMP)
cellular response to virus  (ISO)
chaperone-mediated protein complex assembly  (ISO)
neuron migration  (ISO)
nitric oxide biosynthetic process  (TAS)
positive regulation of cardiac muscle contraction  (ISO)
positive regulation of cell size  (ISO)
positive regulation of cytotoxic T cell differentiation  (TAS)
positive regulation of defense response to virus by host  (ISO)
positive regulation of interferon-beta production  (ISO)
positive regulation of lamellipodium assembly  (ISO)
positive regulation of nitric oxide biosynthetic process  (IDA)
positive regulation of protein catabolic process  (ISO)
positive regulation of protein import into nucleus  (ISO)
positive regulation of protein phosphorylation  (ISO)
positive regulation of protein polymerization  (ISO)
protein folding  (IBA,IMP)
protein insertion into mitochondrial outer membrane  (ISO)
protein refolding  (TAS)
protein stabilization  (IBA,ISO)
regulation of apoptotic process  (ISO)
regulation of postsynaptic membrane neurotransmitter receptor levels  (ISO)
regulation of protein localization  (IMP)
regulation of protein ubiquitination  (ISO)
response to cocaine  (ISO)
response to estrogen  (ISO)
response to salt stress  (ISO)
response to unfolded protein  (TAS)
response to xenobiotic stimulus  (ISO)
skeletal muscle contraction  (ISO)
telomerase holoenzyme complex assembly  (ISO)
telomere maintenance via telomerase  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Antitumor activity of the combination of an HSP90 inhibitor and a PI3K/mTOR dual inhibitor against cholangiocarcinoma. Chen MH, etal., Oncotarget. 2014 May 15;5(9):2372-89. doi: 10.18632/oncotarget.1706.
2. BDNF, TNFalpha, HSP90, CFH, and IL-10 serum levels in patients with early or late onset Alzheimer's disease or mild cognitive impairment. Gezen-Ak D, etal., J Alzheimers Dis. 2013;37(1):185-95. doi: 10.3233/JAD-130497.
3. Phosphoproteomic analysis reveals site-specific changes in GFAP and NDRG2 phosphorylation in frontotemporal lobar degeneration. Herskowitz JH, etal., J Proteome Res. 2010 Dec 3;9(12):6368-79. doi: 10.1021/pr100666c. Epub 2010 Oct 22.
4. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
5. Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Ko MS, etal., Hum Mol Genet 1998 Nov;7(12):1967-78.
6. Alpha-lipoic acid does not alter stress protein response to acute exercise in diabetic brain. Lappalainen J, etal., Cell Biochem Funct. 2010 Dec 2;28(8):644-50. doi: 10.1002/cbf.1702. Epub 2010 Oct 29.
7. Blood-based biomarkers for detecting mild osteoarthritis in the human knee. Marshall KW, etal., Osteoarthritis Cartilage. 2005 Oct;13(10):861-71.
8. MGDs mouse GO annotations MGD data from the GO Consortium
9. Protein kinase C: poised to signal. Newton AC Am J Physiol Endocrinol Metab. 2010 Mar;298(3):E395-402. Epub 2009 Nov 24.
10. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
11. Isoflavone-deprived soy peptide suppresses mammary tumorigenesis by inducing apoptosis. Park K, etal., Exp Mol Med. 2009 Jun 30;41(6):371-81.
12. Sustained activation of protein kinase C downregulates nuclear factor-kappaB signaling by dissociation of IKK-gamma and Hsp90 complex in human colonic epithelial cells. Park KA, etal., Carcinogenesis. 2007 Jan;28(1):71-80. doi: 10.1093/carcin/bgl094. Epub 2006 Jun 14.
13. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
14. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
15. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
16. Chaperoning of glucocorticoid receptors. Pratt WB, etal., Handb Exp Pharmacol. 2006;(172):111-38.
17. Molecular chaperones throughout the life cycle of the androgen receptor. Prescott J and Coetzee GA, Cancer Lett. 2006 Jan 8;231(1):12-9.
18. Mouse MP Annotation Import Pipeline RGD automated import pipeline
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. Heat shock protein gene expression profile may differentiate between rheumatoid arthritis, osteoarthritis, and healthy controls. Sedlackova L, etal., Scand J Rheumatol. 2011;40(5):354-7. doi: 10.3109/03009742.2011.552522. Epub 2011 Mar 21.
21. Minireview: the intersection of steroid receptors with molecular chaperones: observations and questions. Smith DF and Toft DO, Mol Endocrinol. 2008 Oct;22(10):2229-40. Epub 2008 May 1.
22. Analysis of heat shock proteins and cytokines expressed during early stages of osteoarthritis in a mouse model. Takahashi K, etal., Osteoarthritis Cartilage. 1997 Sep;5(5):321-9.
23. Increased heat-shock protein 90 expression contributes to impaired adaptive cytoprotection in the gastric mucosa of portal hypertensive rats. Tominaga M, etal., J Gastroenterol Hepatol. 2009 Jun;24(6):1136-41. Epub 2009 Mar 11.
24. Chaperone mediated autophagy to the rescue: A new-fangled target for the treatment of neurodegenerative diseases. Xilouri M and Stefanis L, Mol Cell Neurosci. 2015 May;66(Pt A):29-36. doi: 10.1016/j.mcn.2015.01.003. Epub 2015 Feb 25.
25. Interactions of the mineralocorticoid receptor--within and without. Yang J and Fuller PJ, Mol Cell Endocrinol. 2012 Mar 24;350(2):196-205. doi: 10.1016/j.mce.2011.07.001. Epub 2011 Jul 18.
Additional References at PubMed
PMID:1916807   PMID:2469626   PMID:2507541   PMID:2806771   PMID:2882955   PMID:2925609   PMID:3458168   PMID:6095043   PMID:6413838   PMID:7671812   PMID:8562047   PMID:8974842  
PMID:9020169   PMID:9122205   PMID:9250399   PMID:9507200   PMID:9880236   PMID:10349636   PMID:10378145   PMID:10654595   PMID:10725249   PMID:10922068   PMID:10995457   PMID:11042159  
PMID:11076861   PMID:11099500   PMID:11461004   PMID:11568360   PMID:11867214   PMID:11867521   PMID:12136260   PMID:12231209   PMID:12477932   PMID:12495215   PMID:12520002   PMID:12713799  
PMID:12748967   PMID:12855682   PMID:12885400   PMID:13129914   PMID:14610273   PMID:14724288   PMID:14766729   PMID:15226823   PMID:15489334   PMID:15642353   PMID:15664193   PMID:15703188  
PMID:15782199   PMID:15864309   PMID:16083881   PMID:16141072   PMID:16141073   PMID:16196101   PMID:16280321   PMID:16495214   PMID:16602821   PMID:16644868   PMID:17030621   PMID:17189825  
PMID:17208939   PMID:17267699   PMID:17298173   PMID:17327415   PMID:17360691   PMID:17475835   PMID:17634366   PMID:17661394   PMID:17908927   PMID:17923681   PMID:17967808   PMID:17975158  
PMID:18216248   PMID:18307411   PMID:18367605   PMID:18474241   PMID:18478096   PMID:18480550   PMID:18550790   PMID:18554416   PMID:18566586   PMID:18632637   PMID:18703510   PMID:18799693  
PMID:18840695   PMID:19158073   PMID:19581287   PMID:19586661   PMID:19669938   PMID:19805107   PMID:19965370   PMID:20038533   PMID:20299663   PMID:20360068   PMID:20404152   PMID:20568244  
PMID:20595634   PMID:20642453   PMID:20668218   PMID:20686127   PMID:20937816   PMID:21209834   PMID:21267068   PMID:21430289   PMID:21565611   PMID:21677750   PMID:21855797   PMID:21873635  
PMID:21930907   PMID:22431752   PMID:22673621   PMID:22696450   PMID:22718348   PMID:22794259   PMID:22841823   PMID:22855849   PMID:22895790   PMID:22902560   PMID:23016877   PMID:23047121  
PMID:23055941   PMID:23139789   PMID:23180766   PMID:23184943   PMID:23213375   PMID:23428871   PMID:23980576   PMID:24286867   PMID:24457600   PMID:24682203   PMID:25114250   PMID:25262350  
PMID:25359884   PMID:25653208   PMID:25737280   PMID:26025364   PMID:26884463   PMID:27034005   PMID:27103069   PMID:27113764   PMID:27418101   PMID:27496612   PMID:27591899   PMID:27649575  
PMID:27686098   PMID:27738310   PMID:27739607   PMID:27885808   PMID:28116619   PMID:28378742   PMID:28407697   PMID:28671696   PMID:28942361   PMID:29127155   PMID:29382714   PMID:29391475  
PMID:29459677   PMID:29662162   PMID:29916806   PMID:30193958   PMID:30196744   PMID:30335684   PMID:30550785   PMID:30562941   PMID:30595499   PMID:30713523   PMID:30973865   PMID:31147493  
PMID:31227743   PMID:31408169   PMID:32156599   PMID:32245826   PMID:32282939   PMID:32290105   PMID:32325033   PMID:32554809   PMID:32640214   PMID:32718999   PMID:32894426   PMID:33296658  
PMID:33705388   PMID:33762741   PMID:34133714   PMID:35675957   PMID:35715007   PMID:36108743   PMID:36114006   PMID:36198274   PMID:36270993   PMID:36293380   PMID:36417873   PMID:37172722  
PMID:37633951   PMID:37839992   PMID:38055149   PMID:38266827  


Genomics

Comparative Map Data
Hsp90aa1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912110,657,470 - 110,662,829 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12110,657,039 - 110,669,162 (-)EnsemblGRCm39 Ensembl
GRCm3812110,691,036 - 110,696,395 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12110,690,605 - 110,702,728 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712111,929,246 - 111,934,605 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612111,138,843 - 111,144,202 (-)NCBIMGSCv36mm8
Celera12111,881,002 - 111,886,365 (-)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1260.75NCBI
HSP90AA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3814102,080,742 - 102,139,749 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl14102,080,742 - 102,139,699 (-)EnsemblGRCh38hg38GRCh38
GRCh3714102,547,079 - 102,606,086 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3614101,616,828 - 101,675,839 (-)NCBINCBI36Build 36hg18NCBI36
Build 3414101,617,144 - 101,623,135NCBI
Celera1482,601,564 - 82,660,582 (-)NCBICelera
Cytogenetic Map14q32.31NCBI
HuRef1482,725,979 - 82,785,051 (-)NCBIHuRef
CHM1_114102,484,935 - 102,543,941 (-)NCBICHM1_1
T2T-CHM13v2.01496,316,329 - 96,375,332 (-)NCBIT2T-CHM13v2.0
Hsp90aa1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86135,523,604 - 135,529,687 (-)NCBIGRCr8
mRatBN7.26129,702,376 - 129,707,907 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6129,702,383 - 129,707,268 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6129,879,675 - 129,884,976 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06130,175,668 - 130,180,969 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06129,539,256 - 129,544,788 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06135,107,262 - 135,112,793 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6135,107,271 - 135,112,775 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl6135,045,363 - 135,049,728 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06144,182,009 - 144,187,540 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46135,413,616 - 135,419,147 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16135,419,806 - 135,425,334 (-)NCBI
Celera6127,272,361 - 127,277,892 (-)NCBICelera
Cytogenetic Map6q32NCBI
Hsp90aa1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555381,469,544 - 1,475,019 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555381,469,544 - 1,475,010 (-)NCBIChiLan1.0ChiLan1.0
HSP90AA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v215103,233,362 - 103,292,106 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan114102,449,856 - 102,456,012 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01482,700,881 - 82,707,020 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.114102,519,033 - 102,524,639 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl14102,519,699 - 102,576,723 (-)Ensemblpanpan1.1panPan2
HSP90AA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1870,091,203 - 70,096,107 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl870,092,217 - 70,095,243 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha869,605,578 - 69,611,507 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0870,369,324 - 70,375,263 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl870,369,667 - 70,374,704 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1870,033,441 - 70,039,369 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0870,098,797 - 70,104,717 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0870,498,429 - 70,504,357 (-)NCBIUU_Cfam_GSD_1.0
Hsp90aa1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244086403,873,950 - 3,879,144 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936835316,767 - 321,990 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936835316,767 - 321,999 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSP90AA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.27129,758,754 - 129,760,542 (+)NCBISscrofa10.2Sscrofa10.2susScr3
HSP90AA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12480,016,352 - 80,019,130 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2480,016,232 - 80,019,120 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605367,207,536 - 67,213,629 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hsp90aa1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247342,233,547 - 2,241,436 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247342,233,932 - 2,239,687 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Hsp90aa1
150 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:755
Count of miRNA genes:439
Interacting mature miRNAs:485
Transcripts:ENSMUST00000021698, ENSMUST00000094361, ENSMUST00000124156, ENSMUST00000129005, ENSMUST00000134967, ENSMUST00000145255, ENSMUST00000149189, ENSMUST00000155242
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226793Feml10_mfemur length 10, 5 week (mouse)1268346774113363620Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277512220111512220Mouse
4141610Tailaq1_mtail length adjusted QTL 1 (mouse)Not determined80956708113383533Mouse
4142401Egq10_mearly growth QTL 10 (mouse)Not determined80956708113383533Mouse
4141335W6q10_mweight 6 weeks QTL 10 (mouse)Not determined80956708113383533Mouse
39128213Lwq23_mliver weight QTL 10 (mouse)1280956708113383533Mouse
13524849Ppiq11a_mprepulse inhibition QTL 11a (mouse)1280989143114989143Mouse
13524846Ppiq11_mprepulse inhibition QTL 11 (mouse)1282666396116666396Mouse
1301492Dbsty3_mdiabesity 3 (mouse)Not determined1283532075117532224Mouse
1301879Insq10_minsulin QTL 10 (mouse)Not determined1283532075117532224Mouse
1300883Ath21_matherosclerosis 21 (mouse)Not determined1285961579119961683Mouse
10412156Nociq3_mnociceptive sensitivity inflammatory QTL 3 (mouse)Not determined1286396075114831653Mouse
4142007Chlq17_mcirculating hormone level QTL 17 (mouse)Not determined1288052874120092757Mouse
1300545Lifespan3_mlife span 3 (mouse)Not determined1288052874120092757Mouse
1301308Prdt4_mprion disease incubation time 4 (mouse)Not determined1288308354120092757Mouse
5491194Mobq3_mmultigenic obesity QTL 3 (mouse)Not determined1289664071120092757Mouse
1301836Heal5_mwound healing/regeneration 5 (mouse)Not determined1289939031120092757Mouse
1301922Bbaa6_mB.burgdorferi-associated arthritis 6 (mouse)Not determined1290308268120092757Mouse
10402491Dipa4_mdrug induced psychomotor activation 4 (mouse)Not determined1291222515120092757Mouse
12910532Nrq10a_mnoise-induced hearing loss resistant QTL 10a (mouse)1292750025120092757Mouse
12910533Nrq10_mnoise-induced hearing loss resistant QTL 10 (mouse)1292750025120092757Mouse
1357463Vtbt14_mvertebral trabecular bone trait 14 (mouse)Not determined1292936097120092757Mouse
1300973Abmm_mantibody mediated myocarditis (mouse)Not determined1293264461120092757Mouse
11039526Ccc1_mcolitis susceptibility in the Collaborative Cross 1 (mouse)1293528334111028223Mouse
1302177Dps2_mdelta power in slow-wave sleep 2 (mouse)Not determined1294146064120092757Mouse
1302138Im6_mimmunoregulatory 6 (mouse)Not determined1296860337120092757Mouse
1301269Sluc12_msusceptibility to lung cancer 12 (mouse)Not determined1296860337120092757Mouse
10412075Nils1_mneointima lesion size 1 (mouse)Not determined12102024665120092757Mouse
4141297Plyid_mPolymeric IgA dominance (mouse)Not determined109183385115885122Mouse
1558957Igan4_mIgA nephropathy 4 (mouse)Not determined12109750025119024949Mouse

Markers in Region
RH125470  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12F1UniSTS
cM Map1248.0UniSTS
RH125493  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12F1UniSTS
cM Map1248.0UniSTS
Hspca  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12F1UniSTS
cM Map1248.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC152827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC090391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M36830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M57673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X16857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000021698   ⟹   ENSMUSP00000021698
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12110,657,462 - 110,662,723 (-)Ensembl
GRCm38.p6 Ensembl12110,691,028 - 110,696,289 (-)Ensembl
RefSeq Acc Id: ENSMUST00000094361   ⟹   ENSMUSP00000091921
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12110,657,039 - 110,662,829 (-)Ensembl
GRCm38.p6 Ensembl12110,690,605 - 110,696,395 (-)Ensembl
RefSeq Acc Id: ENSMUST00000124156   ⟹   ENSMUSP00000121138
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12110,661,704 - 110,662,692 (-)Ensembl
GRCm38.p6 Ensembl12110,695,270 - 110,696,258 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129005
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12110,659,143 - 110,659,614 (-)Ensembl
GRCm38.p6 Ensembl12110,692,709 - 110,693,180 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134967
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12110,660,094 - 110,660,726 (-)Ensembl
GRCm38.p6 Ensembl12110,693,660 - 110,694,292 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145255
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12110,660,609 - 110,662,106 (-)Ensembl
GRCm38.p6 Ensembl12110,694,175 - 110,695,672 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149189   ⟹   ENSMUSP00000114201
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12110,661,720 - 110,662,385 (-)Ensembl
GRCm38.p6 Ensembl12110,695,286 - 110,695,951 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155242   ⟹   ENSMUSP00000118189
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12110,661,063 - 110,669,162 (-)Ensembl
GRCm38.p6 Ensembl12110,694,629 - 110,702,728 (-)Ensembl
RefSeq Acc Id: NM_010480   ⟹   NP_034610
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912110,657,470 - 110,662,829 (-)NCBI
GRCm3812110,691,036 - 110,696,395 (-)NCBI
MGSCv3712111,929,246 - 111,934,605 (-)RGD
Celera12111,881,002 - 111,886,365 (-)RGD
cM Map12 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_034610 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA37867 (Get FASTA)   NCBI Sequence Viewer  
  AAA37868 (Get FASTA)   NCBI Sequence Viewer  
  AAH18232 (Get FASTA)   NCBI Sequence Viewer  
  AAH46614 (Get FASTA)   NCBI Sequence Viewer  
  AAH49124 (Get FASTA)   NCBI Sequence Viewer  
  AAH94024 (Get FASTA)   NCBI Sequence Viewer  
  BAB23449 (Get FASTA)   NCBI Sequence Viewer  
  BAC36610 (Get FASTA)   NCBI Sequence Viewer  
  BAC40681 (Get FASTA)   NCBI Sequence Viewer  
  BAE27553 (Get FASTA)   NCBI Sequence Viewer  
  BAE28042 (Get FASTA)   NCBI Sequence Viewer  
  BAE36287 (Get FASTA)   NCBI Sequence Viewer  
  BAE38952 (Get FASTA)   NCBI Sequence Viewer  
  BAE38969 (Get FASTA)   NCBI Sequence Viewer  
  BAE38976 (Get FASTA)   NCBI Sequence Viewer  
  BAE39066 (Get FASTA)   NCBI Sequence Viewer  
  BAE39080 (Get FASTA)   NCBI Sequence Viewer  
  BAE39185 (Get FASTA)   NCBI Sequence Viewer  
  BAE39226 (Get FASTA)   NCBI Sequence Viewer  
  BAE39243 (Get FASTA)   NCBI Sequence Viewer  
  BAE39262 (Get FASTA)   NCBI Sequence Viewer  
  BAE39308 (Get FASTA)   NCBI Sequence Viewer  
  BAE39319 (Get FASTA)   NCBI Sequence Viewer  
  BAE39398 (Get FASTA)   NCBI Sequence Viewer  
  BAE40472 (Get FASTA)   NCBI Sequence Viewer  
  BAE40484 (Get FASTA)   NCBI Sequence Viewer  
  CAA34748 (Get FASTA)   NCBI Sequence Viewer  
  EDL18666 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000021698.7
  ENSMUSP00000091921
  ENSMUSP00000091921.5
  ENSMUSP00000114201.2
  ENSMUSP00000118189.2
  ENSMUSP00000121138.2
GenBank Protein P07901 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_034610   ⟸   NM_010480
- UniProtKB: P07901 (UniProtKB/Swiss-Prot),   Q80Y52 (UniProtKB/TrEMBL),   Q3TKA2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000121138   ⟸   ENSMUST00000124156
RefSeq Acc Id: ENSMUSP00000114201   ⟸   ENSMUST00000149189
RefSeq Acc Id: ENSMUSP00000091921   ⟸   ENSMUST00000094361
RefSeq Acc Id: ENSMUSP00000021698   ⟸   ENSMUST00000021698
RefSeq Acc Id: ENSMUSP00000118189   ⟸   ENSMUST00000155242
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P07901-F1-model_v2 AlphaFold P07901 1-733 view protein structure

Promoters
RGD ID:8679288
Promoter ID:EPDNEW_M17675
Type:multiple initiation site
Name:Hsp90aa1_1
Description:Mus musculus heat shock protein 90, alpha , class A member 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3812110,696,309 - 110,696,369EPDNEW
RGD ID:6846977
Promoter ID:MM_ACW:12071
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:HSP90AA1.GSEP07-UNSPLICED,   HSP90AA1.HSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612111,929,476 - 111,929,976 (-)MPROMDB
RGD ID:6823065
Promoter ID:MM_KWN:12794
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000085130
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612111,931,071 - 111,932,202 (-)MPROMDB
RGD ID:6823073
Promoter ID:MM_KWN:12795
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   Brain,   Kidney,   MEF_B6
Transcripts:BC090391_GM12346,   OTTMUST00000085044
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612111,932,724 - 111,933,224 (-)MPROMDB
RGD ID:6823063
Promoter ID:MM_KWN:12796
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000021698,   OTTMUST00000047271,   OTTMUST00000047272,   OTTMUST00000047273,   OTTMUST00000047274,   OTTMUST00000085042
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612111,933,921 - 111,934,932 (-)MPROMDB
RGD ID:6823064
Promoter ID:MM_KWN:12798
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   ES_Cell
Transcripts:OTTMUST00000085043
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612111,940,921 - 111,941,742 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96250 AgrOrtholog
Ensembl Genes ENSMUSG00000021270 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000021698.13 UniProtKB/Swiss-Prot
  ENSMUST00000094361 ENTREZGENE
  ENSMUST00000094361.11 UniProtKB/Swiss-Prot
  ENSMUST00000124156.8 UniProtKB/TrEMBL
  ENSMUST00000149189.2 UniProtKB/TrEMBL
  ENSMUST00000155242.8 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.790 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.230.80 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.11260 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro HATPase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HATPase_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Heat_shock_protein_90_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP90_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hsp90_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hsp90_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15519 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:96250 ENTREZGENE
NCBI Gene 15519 ENTREZGENE
PANTHER HEAT SHOCK PROTEIN HSP 90-ALPHA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11528 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HATPase_c_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP90 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB HSP90AA1 RGD
PhenoGen Hsp90aa1 PhenoGen
PIRSF Hsp90 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS HEATSHOCK90 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HSP90 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HATPase_c UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF110942 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54211 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF55874 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0PJ91_MOUSE UniProtKB/TrEMBL
  A2A6A2_MOUSE UniProtKB/TrEMBL
  B7ZC49_MOUSE UniProtKB/TrEMBL
  B7ZC50_MOUSE UniProtKB/TrEMBL
  HS90A_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TJU7_MOUSE UniProtKB/TrEMBL
  Q3TKA2 ENTREZGENE, UniProtKB/TrEMBL
  Q3TKB9_MOUSE UniProtKB/TrEMBL
  Q3TKG0_MOUSE UniProtKB/TrEMBL
  Q3UIF3_MOUSE UniProtKB/TrEMBL
  Q80Y52 ENTREZGENE, UniProtKB/TrEMBL
  Q8C2A9_MOUSE UniProtKB/TrEMBL
  Q8C5U3_MOUSE UniProtKB/TrEMBL