Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | pseudohypoaldosteronism | | ISO | STX16 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | pseudohypoaldosteronism | | ISO | STX16 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | | |
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# | Reference Title | Reference Citation |
1. | Functional annotation of a full-length mouse cDNA collection. | Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90. |
2. | MGDs mouse GO annotations | MGD data from the GO Consortium |
3. | Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
4. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
5. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
6. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:8889548 | PMID:10349636 | PMID:10922068 | PMID:11042159 | PMID:11076861 | PMID:12477932 | PMID:12520002 | PMID:12857877 | PMID:14610273 | PMID:15747579 | PMID:16141072 | PMID:16141073 |
PMID:17114649 | PMID:17317779 | PMID:17852734 | PMID:18321981 | PMID:18337752 | PMID:21267068 | PMID:21677750 | PMID:21873635 | PMID:22421546 | PMID:24194600 | PMID:26629404 | PMID:27626380 |
PMID:28700664 | PMID:37848288 |
Stx16 (Mus musculus - house mouse) |
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STX16 (Homo sapiens - human) |
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Stx16 (Rattus norvegicus - Norway rat) |
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Stx16 (Chinchilla lanigera - long-tailed chinchilla) |
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NPEPL1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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STX16 (Canis lupus familiaris - dog) |
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STX16 (Sus scrofa - pig) |
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STX16 (Chlorocebus sabaeus - green monkey) |
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Stx16 (Heterocephalus glaber - naked mole-rat) |
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Variants in Stx16
706 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
AW553605 |
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AI648908 |
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RefSeq Transcripts | NM_001102423 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001102424 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001102425 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001363029 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001363030 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001363031 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_172675 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_156433 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006499436 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006499437 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006499438 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006499439 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006499440 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030250767 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030250771 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030250772 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AK017291 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK029571 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK078110 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK160211 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL669896 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC031395 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC047206 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC065804 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC094436 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC095989 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC138544 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BP763202 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BY122006 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BY125296 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466551 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CX123636 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000044638 ⟹ ENSMUSP00000039543 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000087908 ⟹ ENSMUSP00000085218 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000134876 ⟹ ENSMUSP00000123275 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000147038 ⟹ ENSMUSP00000120279 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000155000 ⟹ ENSMUSP00000119952 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000156054 ⟹ ENSMUSP00000116618 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001102423 ⟹ NP_001095893 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001102424 ⟹ NP_001095894 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001102425 ⟹ NP_001095895 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001363029 ⟹ NP_001349958 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001363030 ⟹ NP_001349959 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001363031 ⟹ NP_001349960 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_172675 ⟹ NP_766263 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NR_156433 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006499436 ⟹ XP_006499499 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006499437 ⟹ XP_006499500 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006499438 ⟹ XP_006499501 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006499439 ⟹ XP_006499502 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006499440 ⟹ XP_006499503 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_030250767 ⟹ XP_030106627 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_030250771 ⟹ XP_030106631 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_030250772 ⟹ XP_030106632 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001095893 | (Get FASTA) | NCBI Sequence Viewer |
NP_001095894 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001095895 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001349958 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001349959 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001349960 | (Get FASTA) | NCBI Sequence Viewer | |
NP_766263 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006499499 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006499500 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006499501 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006499502 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006499503 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030106627 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030106631 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030106632 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH94436 | (Get FASTA) | NCBI Sequence Viewer |
AAI38545 | (Get FASTA) | NCBI Sequence Viewer | |
BAC26518 | (Get FASTA) | NCBI Sequence Viewer | |
BAC37129 | (Get FASTA) | NCBI Sequence Viewer | |
EDL06659 | (Get FASTA) | NCBI Sequence Viewer | |
EDL06660 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSMUSP00000039543.7 | ||
ENSMUSP00000085218 | |||
ENSMUSP00000085218.4 | |||
ENSMUSP00000116618 | |||
ENSMUSP00000116618.2 | |||
ENSMUSP00000119952.2 | |||
ENSMUSP00000120279.2 | |||
ENSMUSP00000123275.2 | |||
GenBank Protein | Q8BVI5 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_766263 ⟸ NM_172675 |
- Peptide Label: | isoform a |
- UniProtKB: | A2ACM7 (UniProtKB/Swiss-Prot), Q8BVI5 (UniProtKB/Swiss-Prot), F6X4N5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001095893 ⟸ NM_001102423 |
- Peptide Label: | isoform b |
- UniProtKB: | F6X4N5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001095894 ⟸ NM_001102424 |
- Peptide Label: | isoform c |
- UniProtKB: | Q0VGN4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001095895 ⟸ NM_001102425 |
- Peptide Label: | isoform d |
- UniProtKB: | Q0VGN4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006499503 ⟸ XM_006499440 |
- Peptide Label: | isoform X2 |
- Sequence: |
RefSeq Acc Id: | XP_006499500 ⟸ XM_006499437 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8C0W8 (UniProtKB/TrEMBL), Q0VGN4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006499501 ⟸ XM_006499438 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8C0W8 (UniProtKB/TrEMBL), Q0VGN4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006499502 ⟸ XM_006499439 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8C0W8 (UniProtKB/TrEMBL), Q0VGN4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006499499 ⟸ XM_006499436 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8C0W8 (UniProtKB/TrEMBL), Q0VGN4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_030106627 ⟸ XM_030250767 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_030106632 ⟸ XM_030250772 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | NP_001349959 ⟸ NM_001363030 |
- Peptide Label: | isoform f |
- UniProtKB: | Q8C0W8 (UniProtKB/TrEMBL), Q0VGN4 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001349958 ⟸ NM_001363029 |
- Peptide Label: | isoform e |
- UniProtKB: | F7CJY7 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001349960 ⟸ NM_001363031 |
- Peptide Label: | isoform g |
RefSeq Acc Id: | XP_030106631 ⟸ XM_030250771 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | ENSMUSP00000120279 ⟸ ENSMUST00000147038 |
RefSeq Acc Id: | ENSMUSP00000085218 ⟸ ENSMUST00000087908 |
RefSeq Acc Id: | ENSMUSP00000123275 ⟸ ENSMUST00000134876 |
RefSeq Acc Id: | ENSMUSP00000039543 ⟸ ENSMUST00000044638 |
RefSeq Acc Id: | ENSMUSP00000116618 ⟸ ENSMUST00000156054 |
RefSeq Acc Id: | ENSMUSP00000119952 ⟸ ENSMUST00000155000 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q8BVI5-F1-model_v2 | AlphaFold | Q8BVI5 | 1-326 | view protein structure |
RGD ID: | 6832904 | ||||||||
Promoter ID: | MM_KWN:33290 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Kidney, Liver, MEF_B4, MEF_B6 | ||||||||
Transcripts: | AK084083_D130084N16RIK, ENSMUST00000087908, ENSMUST00000094281, NM_001102423, NM_001102424, NM_001102425, OTTMUST00000039399 | ||||||||
Position: |
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RGD ID: | 6832880 | ||||||||
Promoter ID: | MM_KWN:33289 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0, ES_Cell, Lung | ||||||||
Transcripts: | ENSMUST00000044638, OTTMUST00000039396, OTTMUST00000039397, OTTMUST00000039398, UC008OEJ.1 | ||||||||
Position: |
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RGD ID: | 6879936 | ||||||||
Promoter ID: | EPDNEW_M3419 | ||||||||
Type: | initiation region | ||||||||
Name: | Stx16_1 | ||||||||
Description: | Mus musculus syntaxin 16 , transcript variant 4, mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:1923396 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000027522 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENSMUST00000044638.13 | UniProtKB/TrEMBL |
ENSMUST00000087908 | ENTREZGENE | |
ENSMUST00000087908.10 | UniProtKB/Swiss-Prot | |
ENSMUST00000134876.8 | UniProtKB/TrEMBL | |
ENSMUST00000147038.8 | UniProtKB/TrEMBL | |
ENSMUST00000155000.8 | UniProtKB/TrEMBL | |
ENSMUST00000156054 | ENTREZGENE | |
ENSMUST00000156054.2 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.20.5.110 | UniProtKB/TrEMBL |
1.20.58.70 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
InterPro | SNARE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Syntaxin | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Syntaxin/epimorphin_CS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Syntaxin_N | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
T_SNARE_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:228960 | UniProtKB/Swiss-Prot |
MGD | MGI:1923396 | ENTREZGENE |
NCBI Gene | 228960 | ENTREZGENE |
PANTHER | PTHR19957 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR19957:SF83 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | SNARE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Syntaxin | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Stx16 | PhenoGen |
PROSITE | SYNTAXIN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
T_SNARE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | t_SNARE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SNARE fusion complex | UniProtKB/TrEMBL |
SSF47661 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | A2ACM7 | ENTREZGENE |
B7ZCB7_MOUSE | UniProtKB/TrEMBL | |
B7ZCB8_MOUSE | UniProtKB/TrEMBL | |
B7ZCB9_MOUSE | UniProtKB/TrEMBL | |
F6X4N5 | ENTREZGENE, UniProtKB/TrEMBL | |
F7CJY7 | ENTREZGENE, UniProtKB/TrEMBL | |
Q0VGN4 | ENTREZGENE, UniProtKB/TrEMBL | |
Q8BVI5 | ENTREZGENE | |
Q8C0W8 | ENTREZGENE, UniProtKB/TrEMBL | |
STX16_MOUSE | UniProtKB/Swiss-Prot | |
UniProt Secondary | A2ACM7 | UniProtKB/Swiss-Prot |