Ugcg (UDP-glucose ceramide glucosyltransferase) - Rat Genome Database

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Gene: Ugcg (UDP-glucose ceramide glucosyltransferase) Mus musculus
Analyze
Symbol: Ugcg
Name: UDP-glucose ceramide glucosyltransferase
RGD ID: 1552745
MGI Page MGI
Description: Enables ceramide glucosyltransferase activity. Involved in several processes, including cornified envelope assembly; establishment of skin barrier; and glucosylceramide biosynthetic process. Predicted to be located in Golgi membrane. Predicted to be active in membrane. Is expressed in several structures, including blastocyst; brain; early embryo; liver; and oocyte. Orthologous to human UGCG (UDP-glucose ceramide glucosyltransferase).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: AU043821; C80537; ceramide glucosyltransferase; ectoplacental cone, invasive trophoblast giant cells, extraembryonic ectoderm and chorion sequence 21; Epcs; Epcs21; GCS; GlcT-; GlcT-1; glucosylceramide synthase; glycosylceramide synthase; UDP-glucose ceramide glucosyltransferase-like; UDP-glucose:N-acylsphingosine D-glucosyltransferase; Ugcgl
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39459,189,452 - 59,222,833 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl459,189,257 - 59,222,833 (+)EnsemblGRCm39 Ensembl
GRCm38459,189,507 - 59,222,833 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl459,189,257 - 59,222,833 (+)EnsemblGRCm38mm10GRCm38
MGSCv37459,202,422 - 59,235,705 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36459,283,604 - 59,316,887 (+)NCBIMGSCv36mm8
Celera459,098,657 - 59,131,595 (+)NCBICelera
Cytogenetic Map4B3NCBI
cM Map432.44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2-palmitoylglycerol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4,4'-sulfonyldiphenol  (ISO)
4-vinylcyclohexene dioxide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
all-trans-retinoic acid  (ISO)
AM-251  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[k]fluoranthene  (EXP)
beta-naphthoflavone  (EXP)
bisphenol A  (ISO)
bleomycin A2  (ISO)
bucladesine  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
chloroprene  (EXP)
chromium atom  (ISO)
ciguatoxin CTX1B  (EXP)
cocaine  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (EXP,ISO)
dexamethasone  (ISO)
diallyl trisulfide  (ISO)
dibenz[a,h]anthracene  (ISO)
dibenzo[a,l]pyrene  (ISO)
dibutyl phthalate  (EXP)
diethylstilbestrol  (ISO)
dioxygen  (EXP,ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
elemental selenium  (ISO)
flavonoids  (ISO)
fluoranthene  (EXP,ISO)
fumonisin B1  (ISO)
geldanamycin  (ISO)
heroin  (ISO)
hexadecanoic acid  (ISO)
hydroquinone  (ISO)
hypochlorous acid  (EXP)
indometacin  (ISO)
leflunomide  (ISO)
Licochalcone B  (ISO)
lithium atom  (ISO)
lithium chloride  (ISO)
lithium hydride  (ISO)
maneb  (EXP)
medroxyprogesterone acetate  (ISO)
menadione  (EXP)
mercury atom  (ISO)
mercury(0)  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methoxychlor  (EXP,ISO)
methylmercury chloride  (ISO)
miglustat  (EXP)
mocetinostat  (ISO)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N-ethyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
oleic acid  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenol  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
potassium dichromate  (ISO)
progesterone  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (EXP)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tacedinaline  (ISO)
tamibarotene  (ISO)
tamoxifen  (EXP)
temozolomide  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP)
tetracycline  (EXP)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
Golgi apparatus  (IEA)
Golgi membrane  (ISO)
membrane  (IBA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. cDNA subtraction cloning reveals novel genes whose temporal and spatial expression indicates association with trophoblast invasion. Hemberger M, etal., Dev Biol 2000 Jun 1;222(1):158-69.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Diet-relevant phytochemical intake affects the cardiac AhR and nrf2 transcriptome and reduces heart failure in hypertensive rats. Seymour EM, etal., J Nutr Biochem. 2013 Sep;24(9):1580-6. doi: 10.1016/j.jnutbio.2013.01.008. Epub 2013 Mar 22.
Additional References at PubMed
PMID:8889548   PMID:9623774   PMID:9918791   PMID:9925912   PMID:10349636   PMID:10430909   PMID:10512203   PMID:10922068   PMID:10978518   PMID:11042159   PMID:11076861   PMID:11217851  
PMID:11994410   PMID:12417405   PMID:12477932   PMID:12676797   PMID:14610273   PMID:14681479   PMID:15086559   PMID:15489334   PMID:15840001   PMID:16109770   PMID:16141072   PMID:16141073  
PMID:16283624   PMID:17145749   PMID:17867597   PMID:17883393   PMID:18799693   PMID:19362146   PMID:19705459   PMID:20432257   PMID:20544855   PMID:20637730   PMID:21191069   PMID:21267068  
PMID:21873635   PMID:22851168   PMID:23096701   PMID:23554574   PMID:23671696   PMID:23716689   PMID:23748427   PMID:24214972   PMID:24909663   PMID:25269881   PMID:25938659   PMID:25964538  
PMID:26038579   PMID:28373486   PMID:29044125   PMID:29312601   PMID:29673590   PMID:29973867   PMID:32325033   PMID:34516706   PMID:35168060   PMID:37004877  


Genomics

Comparative Map Data
Ugcg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39459,189,452 - 59,222,833 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl459,189,257 - 59,222,833 (+)EnsemblGRCm39 Ensembl
GRCm38459,189,507 - 59,222,833 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl459,189,257 - 59,222,833 (+)EnsemblGRCm38mm10GRCm38
MGSCv37459,202,422 - 59,235,705 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36459,283,604 - 59,316,887 (+)NCBIMGSCv36mm8
Celera459,098,657 - 59,131,595 (+)NCBICelera
Cytogenetic Map4B3NCBI
cM Map432.44NCBI
UGCG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389111,896,814 - 111,935,369 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9111,896,814 - 111,935,369 (+)EnsemblGRCh38hg38GRCh38
GRCh379114,659,094 - 114,697,649 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369113,699,027 - 113,735,260 (+)NCBINCBI36Build 36hg18NCBI36
Build 349111,738,760 - 111,774,986NCBI
Celera985,158,191 - 85,194,369 (+)NCBICelera
Cytogenetic Map9q31.3NCBI
HuRef984,257,257 - 84,293,341 (+)NCBIHuRef
CHM1_19114,805,585 - 114,841,763 (+)NCBICHM1_1
T2T-CHM13v2.09124,068,161 - 124,106,716 (+)NCBIT2T-CHM13v2.0
Ugcg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8578,828,006 - 78,860,725 (+)NCBIGRCr8
mRatBN7.2574,032,978 - 74,065,701 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl574,032,978 - 74,065,393 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx575,934,197 - 75,966,827 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0577,755,827 - 77,788,455 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0577,727,974 - 77,760,604 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0576,376,722 - 76,419,564 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl576,386,836 - 76,419,560 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0580,530,140 - 80,562,612 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4577,263,334 - 77,295,794 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1577,268,446 - 77,300,599 (+)NCBI
Celera572,854,114 - 72,886,901 (+)NCBICelera
Cytogenetic Map5q24NCBI
Ugcg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541915,416,796 - 15,451,936 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541915,417,468 - 15,451,936 (-)NCBIChiLan1.0ChiLan1.0
UGCG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21127,497,888 - 27,536,068 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1927,500,250 - 27,538,411 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0983,024,602 - 83,065,017 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19111,184,478 - 111,222,613 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9111,184,478 - 111,222,613 (+)Ensemblpanpan1.1panPan2
UGCG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11166,439,346 - 66,472,897 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1166,439,346 - 66,472,897 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1164,850,055 - 64,883,620 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01167,574,649 - 67,608,141 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1167,574,695 - 67,610,200 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11166,089,963 - 66,123,510 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01166,113,247 - 66,146,779 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01166,803,569 - 66,837,122 (+)NCBIUU_Cfam_GSD_1.0
Ugcg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947181,753,275 - 181,790,956 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365591,475,592 - 1,513,273 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365591,475,684 - 1,513,273 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UGCG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,651,879 - 252,688,550 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,651,850 - 252,690,817 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21283,440,499 - 283,479,445 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UGCG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11227,575,519 - 27,614,114 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1227,574,970 - 27,613,811 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603515,167,285 - 15,205,882 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ugcg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476023,056,929 - 23,094,010 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476023,059,141 - 23,094,013 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ugcg
953 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1049
Count of miRNA genes:573
Interacting mature miRNAs:716
Transcripts:ENSMUST00000030074, ENSMUST00000128227, ENSMUST00000133996, ENSMUST00000155153
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
1300574Im2_mimmunoregulatory 2 (mouse)Not determined42807768262077816Mouse
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
1357877Synch1_msynechia 1 (mouse)Not determined42870992562710107Mouse
1301990Arvm1_mautoimmune renal vasculitis 1 (mouse)Not determined42933264663332776Mouse
1301792Hdlq10_mHDL QTL 10 (mouse)Not determined43585970769859853Mouse
1300977Mopkd1_mmodifier of polycystic kidney disease progression 1 (mouse)Not determined43655083970550967Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
1302116Bbaa1_mB.burgdorferi-associated arthritis 1 (mouse)Not determined43825093072251078Mouse
10412178Habiir2_mhyperoxic acute lung injury imprinted region 2 (mouse)Not determined43945212663283678Mouse
1301786Bpq3_mblood pressure QTL 3 (mouse)Not determined44240224076402381Mouse
27226724Tibw2_mtibia width 2, proximal, 10 week (mouse)443000000108357197Mouse
1301941Mmtg1_mmodifier of mammary tumor growth 1 (mouse)Not determined44565844283099157Mouse
1558948Ath8_matherosclerosis 8 (mouse)Not determined445658442105156995Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
12879977Bod2_mbone length and organs 2 (mouse)44628353180283678Mouse
10043880Adip23_madiposity 23 (mouse)Not determined44628353180283678Mouse
1300966Pabr2_mplasma apolipoprotein B (human) regulator 2 (mouse)Not determined446332646105801860Mouse
10449022Aanq1_maristolochic acid nephrotoxicity QTL 1 (mouse)44660382680603826Mouse
11532714Sluc43_msusceptibility to lung cancer 43 (mouse)446642108123127211Mouse
11532688Mh_mmodifier of hemostasis (mouse)44830477582304775Mouse
25314308Mlh1fc1_mMLH1 foci count 1 (mouse)44850000076918237Mouse
1301995Lprm1_mlymphoproliferation modifier 1 (mouse)Not determined45010026284100408Mouse
1301213Lgth3_mbody length 3 (mouse)Not determined45010026284100408Mouse
13207572Spir2_mStreptococcus pneumoniae infection resistance 2 (mouse)45068279588510637Mouse
1301033Abbp2_mA/J and C57BL/6 blood pressure 2 (mouse)Not determined45355083993763305Mouse
4141900Skts-fp1_mskin tumor susceptibility in FVB and PWK 1 (mouse)Not determined453550839124055180Mouse
26884434Zlq1_mzygomatic length QTL 1, 5 week (mouse)453700000103257197Mouse
13524838Hbasrq1a_mhabituation of the acoustic startle response QTL 1a (mouse)45447158988471589Mouse
13524841Hbasrq1_mhabituation of the acoustic startle response QTL 1 (mouse)45447158988471589Mouse
27095905Scvln3_msacral vertebrae length 2, 5 week (mouse)455600000128993793Mouse
27095934Ulnl2_mulna length 2, 5 week (mouse)45770000094788237Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
10043964Obq26_mobesity QTL 26 (mouse)Not determined45904725193047251Mouse

Markers in Region
RH126942  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38459,222,506 - 59,222,719UniSTSGRCm38
MGSCv37459,235,378 - 59,235,591UniSTSGRCm37
Celera459,131,268 - 59,131,481UniSTS
Cytogenetic Map4B3UniSTS
cM Map432.0UniSTS
Whitehead/MRC_RH4963.0UniSTS
AU043821  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38459,222,477 - 59,222,697UniSTSGRCm38
MGSCv37459,235,349 - 59,235,569UniSTSGRCm37
Celera459,131,239 - 59,131,459UniSTS
Cytogenetic Map4B3UniSTS
cM Map432.0UniSTS
Whitehead/MRC_RH4962.79UniSTS
D89866  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38459,220,416 - 59,220,539UniSTSGRCm38
MGSCv37459,233,288 - 59,233,411UniSTSGRCm37
Cytogenetic Map4B3UniSTS
cM Map432.0UniSTS
Whitehead/MRC_RH4962.38UniSTS
Ugcg  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4B3UniSTS
cM Map432.0UniSTS
PMC17746P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38459,218,323 - 59,218,860UniSTSGRCm38
MGSCv37459,231,195 - 59,231,732UniSTSGRCm37
Celera459,127,072 - 59,127,609UniSTS
Cytogenetic Map4B3UniSTS
cM Map432.0UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000030074   ⟹   ENSMUSP00000030074
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl459,189,257 - 59,222,833 (+)Ensembl
GRCm38.p6 Ensembl459,189,257 - 59,222,833 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128227
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl459,211,720 - 59,213,909 (+)Ensembl
GRCm38.p6 Ensembl459,211,720 - 59,213,909 (+)Ensembl
RefSeq Acc Id: ENSMUST00000133996
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl459,189,558 - 59,212,203 (+)Ensembl
GRCm38.p6 Ensembl459,189,558 - 59,212,203 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155153
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl459,212,656 - 59,214,293 (+)Ensembl
GRCm38.p6 Ensembl459,212,656 - 59,214,293 (+)Ensembl
RefSeq Acc Id: NM_011673   ⟹   NP_035803
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,189,550 - 59,222,833 (+)NCBI
GRCm38459,189,550 - 59,222,833 (+)NCBI
MGSCv37459,202,422 - 59,235,705 (+)RGD
Celera459,098,657 - 59,131,595 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006537785   ⟹   XP_006537848
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,189,452 - 59,222,833 (+)NCBI
GRCm38459,189,507 - 59,222,833 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_035803 (Get FASTA)   NCBI Sequence Viewer  
  XP_006537848 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH50828 (Get FASTA)   NCBI Sequence Viewer  
  BAA28782 (Get FASTA)   NCBI Sequence Viewer  
  BAA33558 (Get FASTA)   NCBI Sequence Viewer  
  EDL02214 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000030074
  ENSMUSP00000030074.8
GenBank Protein O88693 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_035803   ⟸   NM_011673
- UniProtKB: A2AN90 (UniProtKB/Swiss-Prot),   O88693 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006537848   ⟸   XM_006537785
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000030074   ⟸   ENSMUST00000030074

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O88693-F1-model_v2 AlphaFold O88693 1-394 view protein structure

Promoters
RGD ID:6883528
Promoter ID:EPDNEW_M5215
Type:initiation region
Name:Ugcg_1
Description:Mus musculus UDP-glucose ceramide glucosyltransferase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38459,189,540 - 59,189,600EPDNEW
RGD ID:6836626
Promoter ID:MM_KWN:37824
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B6,   Spleen
Transcripts:OTTMUST00000017544,   OTTMUST00000017545,   UC008SZR.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36459,201,696 - 59,202,457 (+)MPROMDB
RGD ID:6836625
Promoter ID:MM_KWN:37826
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:OTTMUST00000017547
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36459,225,146 - 59,225,646 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1332243 AgrOrtholog
Ensembl Genes ENSMUSG00000028381 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000030074 ENTREZGENE
  ENSMUST00000030074.8 UniProtKB/Swiss-Prot
InterPro Ceramide_glucosylTrfase UniProtKB/Swiss-Prot
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot
KEGG Report mmu:22234 UniProtKB/Swiss-Prot
MGD MGI:1332243 ENTREZGENE
NCBI Gene 22234 ENTREZGENE
PANTHER CERAMIDE GLUCOSYLTRANSFERASE UniProtKB/Swiss-Prot
  PTHR12726 UniProtKB/Swiss-Prot
Pfam Glyco_transf_21 UniProtKB/Swiss-Prot
PhenoGen Ugcg PhenoGen
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot
UniProt A2AN90 ENTREZGENE
  CEGT_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary A2AN90 UniProtKB/Swiss-Prot