Acvr1c (activin A receptor, type IC) - Rat Genome Database

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Gene: Acvr1c (activin A receptor, type IC) Mus musculus
Analyze
Symbol: Acvr1c
Name: activin A receptor, type IC
RGD ID: 1552650
MGI Page MGI
Description: Predicted to enable several functions, including ATP binding activity; BMP receptor binding activity; and activin binding activity. Acts upstream of or within several processes, including negative regulation of insulin secretion; response to dietary excess; and response to insulin. Predicted to be located in cell surface. Predicted to be part of activin receptor complex. Predicted to be active in plasma membrane. Is expressed in several structures, including adipose tissue; adrenal gland; alimentary system; brain; and genitourinary system. Orthologous to human ACVR1C (activin A receptor type 1C).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: activin receptor type IC; activin receptor type-1C; activin receptor-like kinase 7; ACTR-IC; ACVRLK7; AL; Alk; Alk-7; ALK7; C230097P10
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39258,157,465 - 58,247,909 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl258,157,465 - 58,247,907 (-)EnsemblGRCm39 Ensembl
GRCm38258,267,453 - 58,357,896 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl258,267,453 - 58,357,895 (-)EnsemblGRCm38mm10GRCm38
MGSCv37258,119,864 - 58,210,169 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36258,087,208 - 58,140,193 (-)NCBIMGSCv36mm8
Celera260,022,538 - 60,113,847 (-)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map233.05NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,2-(2-Chlorophenyl-4'-chlorophenyl)-1,1-dichloroethene  (ISO)
2,4-dinitrotoluene  (ISO)
2-butan-2-yl-4-[4-[4-[4-[[2-(2,4-dichlorophenyl)-2-(1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy]phenyl]-1-piperazinyl]phenyl]-1,2,4-triazol-3-one  (EXP)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
3,4-dichloroaniline  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
aldrin  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (ISO)
butanal  (ISO)
carboplatin  (ISO)
choline  (EXP)
cisplatin  (ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
DDD  (ISO)
DDE  (ISO)
dexamethasone  (ISO)
diazinon  (ISO)
dieldrin  (ISO)
diuron  (ISO)
fenvalerate  (ISO)
flutamide  (ISO)
folic acid  (EXP)
fonofos  (ISO)
furan  (ISO)
gamma-hexachlorocyclohexane  (ISO)
glycidol  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
indometacin  (ISO)
itraconazole  (EXP)
ketamine  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
melphalan  (ISO)
methimazole  (ISO)
methylmercury(1+)  (ISO)
nickel atom  (ISO)
ozone  (EXP)
parathion  (ISO)
rac-lactic acid  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (EXP)
sulfadimethoxine  (ISO)
terbufos  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
trichostatin A  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
tunicamycin  (EXP)
urethane  (ISO)
valproic acid  (ISO)
venlafaxine hydrochloride  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Gene expression changes in the retina after systemic administration of aldosterone. Ono A, etal., Jpn J Ophthalmol. 2018 Jul;62(4):499-507. doi: 10.1007/s10384-018-0595-4. Epub 2018 Apr 30.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:14729481   PMID:15196700   PMID:15342483   PMID:15485907   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:16564040   PMID:16602821   PMID:16845371   PMID:16953060   PMID:18077674   PMID:18241853   PMID:18287559   PMID:18480258   PMID:18480259   PMID:21267068   PMID:21731673   PMID:21873635  
PMID:22056140   PMID:22550067   PMID:22585713   PMID:22933117   PMID:22954591   PMID:23034635   PMID:23264230   PMID:23342175   PMID:24194600   PMID:24952961   PMID:24997765   PMID:25161195  
PMID:26249805   PMID:26882027   PMID:28927503   PMID:29945891   PMID:31063757   PMID:31320323   PMID:32366358   PMID:32467530   PMID:34173336   PMID:34245608   PMID:35736809   PMID:36059980  
PMID:36626233  


Genomics

Comparative Map Data
Acvr1c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39258,157,465 - 58,247,909 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl258,157,465 - 58,247,907 (-)EnsemblGRCm39 Ensembl
GRCm38258,267,453 - 58,357,896 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl258,267,453 - 58,357,895 (-)EnsemblGRCm38mm10GRCm38
MGSCv37258,119,864 - 58,210,169 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36258,087,208 - 58,140,193 (-)NCBIMGSCv36mm8
Celera260,022,538 - 60,113,847 (-)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map233.05NCBI
ACVR1C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382157,526,767 - 157,628,864 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2157,526,767 - 157,628,864 (-)EnsemblGRCh38hg38GRCh38
GRCh372158,383,279 - 158,485,376 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362158,097,150 - 158,193,645 (-)NCBINCBI36Build 36hg18NCBI36
Build 342158,214,411 - 158,310,902NCBI
Celera2151,996,398 - 152,098,507 (-)NCBICelera
Cytogenetic Map2q24.1NCBI
HuRef2150,268,922 - 150,370,677 (-)NCBIHuRef
CHM1_12158,389,261 - 158,491,360 (-)NCBICHM1_1
T2T-CHM13v2.02157,980,200 - 158,081,964 (-)NCBIT2T-CHM13v2.0
Acvr1c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8363,224,322 - 63,301,252 (-)NCBIGRCr8
mRatBN7.2342,815,490 - 42,892,423 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl342,822,610 - 42,892,327 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx346,155,042 - 46,224,767 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0354,750,410 - 54,820,131 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0352,529,199 - 52,598,998 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0344,272,859 - 44,342,501 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl344,270,653 - 44,342,355 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0349,392,012 - 49,462,621 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4340,027,228 - 40,102,303 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1339,923,599 - 39,998,675 (-)NCBI
Celera340,890,441 - 40,959,920 (-)NCBICelera
Cytogenetic Map3q21NCBI
Acvr1c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544915,813,856 - 15,858,537 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544915,814,230 - 15,864,747 (+)NCBIChiLan1.0ChiLan1.0
ACVR1C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21360,191,507 - 60,289,620 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B60,206,482 - 60,304,587 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B44,785,808 - 44,883,977 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B162,027,016 - 162,080,583 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B162,034,161 - 162,124,151 (-)Ensemblpanpan1.1panPan2
ACVR1C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1363,534,231 - 3,583,310 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl363,541,248 - 3,613,384 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha363,671,176 - 3,750,547 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0363,656,388 - 3,735,771 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl363,662,294 - 3,736,109 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1363,658,544 - 3,737,821 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0363,718,246 - 3,797,628 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0363,756,338 - 3,835,686 (-)NCBIUU_Cfam_GSD_1.0
Acvr1c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303120,653,036 - 120,725,005 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646920,892,466 - 20,960,098 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646920,892,715 - 20,964,674 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACVR1C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1564,455,989 - 64,529,107 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11564,452,632 - 64,529,329 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21571,381,954 - 71,455,690 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACVR1C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11042,935,085 - 43,030,581 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1042,942,284 - 42,994,488 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040156,542,844 - 156,643,373 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acvr1c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247328,130,962 - 8,247,289 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247328,130,970 - 8,247,528 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Acvr1c
2782 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3367
Count of miRNA genes:889
Interacting mature miRNAs:1219
Transcripts:ENSMUST00000028178, ENSMUST00000100085, ENSMUST00000112607, ENSMUST00000112608, ENSMUST00000154453
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22896112962961129Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
4142447Pbwg1.7_mpostnatal body weight growth 1.7 (mouse)Not determined3579732469797406Mouse
4141186Pbwg1.8_mpostnatal body weight growth 1.8 (mouse)Not determined3579732469797406Mouse
4142133Pbwg1.6_mpostnatal body weight growth 1.6 (mouse)Not determined3579732469797406Mouse
1559001Eae33_mexperimental allergic encephalomyelitis susceptibility 33 (mouse)Not determined23599167971609412Mouse
10449151Hdl8_mhigh density lipoprotein (HDL) level 8 (mouse)23812972567072607Mouse
10449150Pvldlc1_mplasma VLDL-cholesterol 1 (mouse)23812972567072607Mouse
10449145Lanq1_mlanosterol level QTL 1 (mouse)23812972567072607Mouse
11038703Ltpr1_mLeishmania tropica response 1 (mouse)23997166573971811Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1301480Pbwg1_mpostnatal body weight growth 1 (mouse)Not determined24182071975820843Mouse
4141069Pbwg1.5_mpostnatal body weight growth 1.5 (mouse)Not determined4352061277520756Mouse
1300788Cia2_mcollagen induced arthritis QTL 2 (mouse)Not determined24352061277520756Mouse
1300671Cia4_mcollagen induced arthritis QTL 4 (mouse)Not determined24352061277520756Mouse
1301402Ap2q_malcohol preference 2 QTL (mouse)Not determined24352061277520756Mouse
1301411Pitm1_mprion incubation time 1 (mouse)Not determined24352061277520756Mouse
10755532Lymph5_mlymphocyte differential 5 (mouse)24419901778199017Mouse
1300645Alcp1_malcohol preference locus 1 (mouse)Not determined24522812867838868Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
11532740Pbwg1.10_mpostnatal body weight growth 1.10 (mouse)24813241282132495Mouse
1558820Moo1_mmodifier of Odc1 (mouse)Not determined174826974682269934Mouse
1301747Eae21_mexperimental allergic encephalomyelitis 21 (mouse)Not determined24826974682269934Mouse
1301235Alcw4_malcohol withdrawal 4 (mouse)Not determined24826974682269934Mouse
1300568Hdl1_mhigh density lipoprotein (HDL) level 1 (mouse)Not determined24826974682269934Mouse
10755526Lymph1_mlymphocyte differential 1 (mouse)25081931484819314Mouse
1300875Taste1_mtaste-saccharin preference 1 (mouse)Not determined25092317584923278Mouse
1300761Lgth1_mbody length 1 (mouse)Not determined25170327685703425Mouse
13464141Hbbcq3_mhemoglobin concentration QTL 3 (mouse)25244801986448136Mouse
13463471Hctq6_mhematocrit QTL 6 (mouse)25244801986448136Mouse
4142185Pbwg1.3_mpostnatal body weight growth 1.3 (mouse)Not determined5718712365132495Mouse
4141406Alpq2_malcohol preference QTL 2 (mouse)Not determined25752411791524288Mouse
12738429Lfibq18_mliver fibrosis QTL 18 (mouse)25791999191919991Mouse

Markers in Region
Acvr1c  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2C1.1UniSTS
cM Map2 UniSTS
BF390693  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38258,287,737 - 58,287,893UniSTSGRCm38
MGSCv37258,140,148 - 58,140,304UniSTSGRCm37
Celera260,042,918 - 60,043,074UniSTS
Cytogenetic Map2C1.1UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000028178   ⟹   ENSMUSP00000028178
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl258,157,465 - 58,247,907 (-)Ensembl
GRCm38.p6 Ensembl258,267,453 - 58,357,895 (-)Ensembl
RefSeq Acc Id: ENSMUST00000100085   ⟹   ENSMUSP00000097663
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl258,161,834 - 58,214,819 (-)Ensembl
GRCm38.p6 Ensembl258,271,822 - 58,324,807 (-)Ensembl
RefSeq Acc Id: ENSMUST00000112607   ⟹   ENSMUSP00000108226
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl258,164,747 - 58,247,764 (-)Ensembl
GRCm38.p6 Ensembl258,274,735 - 58,357,752 (-)Ensembl
RefSeq Acc Id: ENSMUST00000112608   ⟹   ENSMUSP00000108227
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl258,164,747 - 58,247,764 (-)Ensembl
GRCm38.p6 Ensembl258,274,735 - 58,357,752 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154453   ⟹   ENSMUSP00000119776
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl258,186,147 - 58,214,819 (-)Ensembl
GRCm38.p6 Ensembl258,296,135 - 58,324,807 (-)Ensembl
RefSeq Acc Id: NM_001033369   ⟹   NP_001028541
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39258,157,465 - 58,214,819 (-)NCBI
GRCm38258,267,453 - 58,324,807 (-)NCBI
MGSCv37258,119,864 - 58,210,169 (-)RGD
Celera260,022,538 - 60,113,847 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001111030   ⟹   NP_001104500
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39258,157,465 - 58,247,770 (-)NCBI
GRCm38258,267,453 - 58,357,758 (-)NCBI
MGSCv37258,119,864 - 58,210,169 (-)RGD
Celera260,022,538 - 60,113,847 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006498085   ⟹   XP_006498148
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39258,157,465 - 58,214,814 (-)NCBI
GRCm38258,267,453 - 58,324,804 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006498086   ⟹   XP_006498149
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39258,157,465 - 58,247,909 (-)NCBI
GRCm38258,267,453 - 58,357,896 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239108   ⟹   XP_011237410
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39258,157,465 - 58,247,688 (-)NCBI
GRCm38258,267,453 - 58,357,676 (-)NCBI
Sequence:
RefSeq Acc Id: XR_374097
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39258,157,465 - 58,247,907 (-)NCBI
GRCm38258,267,453 - 58,357,894 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001028541   ⟸   NM_001033369
- Peptide Label: isoform 2
- UniProtKB: Q3V348 (UniProtKB/TrEMBL),   B7ZNG1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001104500   ⟸   NM_001111030
- Peptide Label: isoform 1 precursor
- UniProtKB: A2AJR4 (UniProtKB/Swiss-Prot),   Q8K348 (UniProtKB/Swiss-Prot),   B7ZNG1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498149   ⟸   XM_006498086
- Peptide Label: isoform X2
- UniProtKB: A2AJR5 (UniProtKB/TrEMBL),   A2AJR6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498148   ⟸   XM_006498085
- Peptide Label: isoform X1
- UniProtKB: B7ZNG1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011237410   ⟸   XM_011239108
- Peptide Label: isoform X1
- UniProtKB: B7ZNG1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000108227   ⟸   ENSMUST00000112608
RefSeq Acc Id: ENSMUSP00000108226   ⟸   ENSMUST00000112607
RefSeq Acc Id: ENSMUSP00000028178   ⟸   ENSMUST00000028178
RefSeq Acc Id: ENSMUSP00000119776   ⟸   ENSMUST00000154453
RefSeq Acc Id: ENSMUSP00000097663   ⟸   ENSMUST00000100085
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8K348-F1-model_v2 AlphaFold Q8K348 1-493 view protein structure

Promoters
RGD ID:6877358
Promoter ID:EPDNEW_M2130
Type:multiple initiation site
Name:Acvr1c_1
Description:Mus musculus activin A receptor, type IC , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38258,357,812 - 58,357,872EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2661081 AgrOrtholog
Ensembl Genes ENSMUSG00000026834 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000028178 ENTREZGENE
  ENSMUST00000028178.14 UniProtKB/Swiss-Prot
  ENSMUST00000100085 ENTREZGENE
  ENSMUST00000100085.8 UniProtKB/TrEMBL
  ENSMUST00000112607.3 UniProtKB/TrEMBL
  ENSMUST00000112608 ENTREZGENE
  ENSMUST00000112608.9 UniProtKB/TrEMBL
  ENSMUST00000154453.2 UniProtKB/TrEMBL
Gene3D-CATH 2.10.60.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Activin_recp UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GS_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Snake_toxin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TGFB_receptor UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:269275 UniProtKB/Swiss-Prot
MGD MGI:2661081 ENTREZGENE
NCBI Gene 269275 ENTREZGENE
PANTHER ACTIVIN RECEPTOR TYPE-1C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23255 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Activin_recp UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TGF_beta_GS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Acvr1c PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS51256 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00467 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57302 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AJR4 ENTREZGENE
  A2AJR5 ENTREZGENE, UniProtKB/TrEMBL
  A2AJR6 ENTREZGENE, UniProtKB/TrEMBL
  ACV1C_MOUSE UniProtKB/Swiss-Prot
  B7ZNG1 ENTREZGENE, UniProtKB/TrEMBL
  D3Z1K2_MOUSE UniProtKB/TrEMBL
  Q3V348 ENTREZGENE, UniProtKB/TrEMBL
  Q8K348 ENTREZGENE
UniProt Secondary A2AJR4 UniProtKB/Swiss-Prot