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Gene Ontology Annotations
Gene Ontology AnnotationsBiological Process Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | axon extension | | IGI | MGI:MGI:102523 | 2290270 | MGI:MGI:2156641|PMID:11807038 | MGI | MGI:MGI:2156641 PMID:11807038 | axon guidance | | IMP | MGI:MGI:3582493 | 2290270 | MGI:MGI:1928568|PMID:11163266 | MGI | MGI:MGI:1928568 PMID:11163266 | axonogenesis | | IMP | MGI:MGI:2429632|MGI:MGI:2429634 | 2290270 | MGI:MGI:2429619|PMID:10357904 | MGI | MGI:MGI:2429619 PMID:10357904 | intracellular estrogen receptor signaling pathway | | ISO | UniProtKB:Q12837 | 2290270 | MGI:MGI:4834177 | MGI | MGI:MGI:4834177 | MAPK cascade | | ISO | UniProtKB:Q12837 | 2290270 | MGI:MGI:4834177 | MGI | MGI:MGI:4834177 | negative regulation of transcription from RNA polymerase II promoter | | IMP | MGI:MGI:2176272 | 2290270 | MGI:MGI:3778704|PMID:18367606 | MGI | MGI:MGI:3778704 PMID:18367606 | negative regulation of transcription from RNA polymerase II promoter | | IDA | | 2290270 | MGI:MGI:5142397|PMID:8670054 | UniProtKB | MGI:MGI:5142397 PMID:8670054 | nervous system development | | ISO | RGD:620075 | 2290270 | MGI:MGI:4417868 | RGD | MGI:MGI:4417868 | neuromuscular process controlling balance | | IGI | MGI:MGI:102523 | 2290270 | MGI:MGI:2156641|PMID:11807038 | MGI | MGI:MGI:2156641 PMID:11807038 | neuron differentiation | | IMP | MGI:MGI:2176272 | 2290270 | MGI:MGI:3621691|PMID:9630743 | MGI | MGI:MGI:3621691 PMID:9630743 | neuron differentiation | | IGI | MGI:MGI:101791 | 2290270 | MGI:MGI:3790171|PMID:18434421 | MGI | MGI:MGI:3790171 PMID:18434421 | neuron differentiation | | IMP | MGI:MGI:3582493 | 2290270 | MGI:MGI:80981|PMID:8637595 | MGI | MGI:MGI:80981 PMID:8637595 | positive regulation of cell differentiation | | IMP | MGI:MGI:2176272 | 2290270 | MGI:MGI:3778704|PMID:18367606 | MGI | MGI:MGI:3778704 PMID:18367606 | positive regulation of transcription from RNA polymerase II promoter | | IDA | | 2290270 | MGI:MGI:3790171|PMID:18434421 | MGI | MGI:MGI:3790171 PMID:18434421 | positive regulation of transcription from RNA polymerase II promoter | | ISO | UniProtKB:Q12837 | 2290270 | MGI:MGI:4834177 | MGI | MGI:MGI:4834177 | positive regulation of transcription from RNA polymerase II promoter | | IDA | | 2290270 | MGI:MGI:3807433|PMID:18368538 | UniProtKB | MGI:MGI:3807433 PMID:18368538 | positive regulation of transcription from RNA polymerase II promoter | | IGI | MGI:MGI:101791 | 2290270 | MGI:MGI:3790171|PMID:18434421 | MGI | MGI:MGI:3790171 PMID:18434421 | regulation of transcription, DNA-dependent | | TAS | | 2290270 | MGI:MGI:1928568|PMID:11163266 | GOC | MGI:MGI:1928568 PMID:11163266 | regulation of transcription, DNA-dependent | | ISS | | 2290270 | MGI:MGI:65745|PMID:8166682 | GOC | MGI:MGI:65745 PMID:8166682 | retina development in camera-type eye | | IMP | MGI:MGI:2176272 | 2290270 | MGI:MGI:3621691|PMID:9630743 | MGI | MGI:MGI:3621691 PMID:9630743 | retina development in camera-type eye | | IMP | MGI:MGI:3582493 | 2290270 | MGI:MGI:80981|PMID:8637595 | MGI | MGI:MGI:80981 PMID:8637595 | retinal ganglion cell axon guidance | | IGI | MGI:MGI:102523 | 2290270 | MGI:MGI:2156641|PMID:11807038 | MGI | MGI:MGI:2156641 PMID:11807038 | retinal ganglion cell axon guidance | | IMP | MGI:MGI:2429634 | 2290270 | MGI:MGI:3790171|PMID:18434421 | MGI | MGI:MGI:3790171 PMID:18434421 | sensory perception of sound | | IGI | MGI:MGI:102523 | 2290270 | MGI:MGI:2156641|PMID:11807038 | MGI | MGI:MGI:2156641 PMID:11807038 | transcription, DNA-dependent | | IEA | UniProtKB-KW:KW-0804 | 2290270 | MGI:MGI:1354194 | UniProtKB | MGI:MGI:1354194 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Pathway Annotations| External Database Links | |
| Pathway Interaction Database | Direct p53 effectors (PID:200120) |
| Validated nuclear estrogen receptor alpha network (PID:200158) | |
Phenotype Annotations
Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Molecular Pathway Annotations| External Database Links | |
| Pathway Interaction Database | Direct p53 effectors (PID:200120) |
| Validated nuclear estrogen receptor alpha network (PID:200158) | |
Phenotype Annotations
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References - curated| 1. |
MGD data from the GO Consortium |
| 2. |
MGD IEA |
| 3. |
Okazaki Y, etal., Nature 2002 Dec 5;420(6915):563-73. |
| 4. |
RGD automated import pipeline |
| 5. |
RGD automated import pipeline for gene-chemical interactions |
References - uncurated| PubMed | 10341242 |
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RGD Disease Portals| Pou4f2 has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| Pou4f2 (Mus musculus) |
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| POU4F2 (Homo sapiens) |
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| Pou4f2 (Rattus norvegicus) |
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Position Markers| PMC125354P2 |
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| Pou4f2 |
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| PMC97568P2 |
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| Pou4f2 |
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| Pou4f2 |
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| Pou4f2 |
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| Pou4f2 |
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QTLs in Region (Mouse Genome Assembly Build 37)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NM_138944 | (Get FASTA) | Search GEO for Microarray Profiles |
| GenBank Nucleotide | AAHY01072311 | (Get FASTA) | Search GEO for Microarray Profiles |
| AC133181 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK084240 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK087546 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH466525 | (Get FASTA) | Search GEO for Microarray Profiles | |
| S68377 | (Get FASTA) | Search GEO for Microarray Profiles | |
| S69351 | (Get FASTA) | Search GEO for Microarray Profiles | |
| Z29629 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_138944 | |||||||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_620394 | |||||||||||||||||||||||||
| Position: |
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Protein Sequences| Protein RefSeqs | NP_620394 | (Get FASTA) |
| GenBank Protein | AAB30578 | (Get FASTA) |
| AAC60672 | (Get FASTA) | |
| AAI56471 | (Get FASTA) | |
| AAI56892 | (Get FASTA) | |
| BAC39921 | (Get FASTA) | |
| CAA82736 | (Get FASTA) | |
| EDL10857 | (Get FASTA) | |
| Q63934 | (Get FASTA) |
External Database Links| Database | Acc Id | Source(s) |
| Ensembl Genes | ENSMUSG00000031688 | ENTREZGENE |
| Ensembl Protein | ENSMUSP00000034115 | ENTREZGENE |
| Ensembl Transcript | ENSMUST00000034115 | ENTREZGENE |
| Entrez Gene | 18997 | ENTREZGENE |
| Gene3D-CATH | G3DSA:1.10.260.40 | UniProtKB/Swiss-Prot |
| Homeodomain-rel | UniProtKB/Swiss-Prot | |
| Germonline | ENSMUSG00000031688 | |
| HomoloGene Group ID | 20959 | ENTREZGENE |
| InterPro | Homeobox | UniProtKB/Swiss-Prot |
| Homeobox_CS | UniProtKB/Swiss-Prot | |
| Homeodomain-like | UniProtKB/Swiss-Prot | |
| Lambda_DNA-bd | UniProtKB/Swiss-Prot | |
| POU | UniProtKB/Swiss-Prot | |
| POU_specific | UniProtKB/Swiss-Prot | |
| KEGG Report | mmu:18997 | ENTREZGENE, UniProtKB/Swiss-Prot |
| MGD | MGI:102524 | ENTREZGENE |
| Pfam | Homeobox | UniProtKB/Swiss-Prot |
| Pou | UniProtKB/Swiss-Prot | |
| PRINTS | POUDOMAIN | UniProtKB/Swiss-Prot |
| PROSITE | HOMEOBOX_1 | UniProtKB/Swiss-Prot |
| HOMEOBOX_2 | UniProtKB/Swiss-Prot | |
| POU_1 | UniProtKB/Swiss-Prot | |
| POU_2 | UniProtKB/Swiss-Prot | |
| POU_3 | UniProtKB/Swiss-Prot | |
| SMART | HOX | UniProtKB/Swiss-Prot |
| POU | UniProtKB/Swiss-Prot | |
| Superfamily-SCOP | Homeodomain_like | UniProtKB/Swiss-Prot |
| Lambda_like_DNA | UniProtKB/Swiss-Prot | |
| UniGene | Mm.234261 | ENTREZGENE |
| UniProt | PO4F2_MOUSE | UniProtKB/Swiss-Prot |
| Q62091_MOUSE | UniProtKB/TrEMBL |
| More on Pou4f2 | |
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Entrez Gene |
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Ensembl Gene |
![]() | Genome Browser |
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MGI Report |
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NCBI Map Viewer |
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Vista |
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Vista + UCSC |
| RGD Object Information | |
| RGD ID: | 1552160 |
| Created: | 2005-09-30 |
| Species: | Mus musculus |
| Last Modified: | 2013-04-09 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




