Ehmt2 (euchromatic histone lysine N-methyltransferase 2) - Rat Genome Database

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Gene: Ehmt2 (euchromatic histone lysine N-methyltransferase 2) Mus musculus
Analyze
Symbol: Ehmt2
Name: euchromatic histone lysine N-methyltransferase 2
RGD ID: 1550173
MGI Page MGI
Description: Enables several functions, including C2H2 zinc finger domain binding activity; histone H3 methyltransferase activity; and promoter-specific chromatin binding activity. Involved in DNA methylation; negative regulation of transcription by RNA polymerase II; and regulation of DNA replication. Acts upstream of or within several processes, including germ cell development; regulation of gene expression; and response to cocaine. Located in nucleus. Is expressed in several structures, including alimentary system; limb; nervous system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in idiopathic pulmonary fibrosis. Orthologous to human EHMT2 (euchromatic histone lysine methyltransferase 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Bat; Bat8; D17Ertd710; D17Ertd710e; euchromatic histone-lysine N-methyltransferase 2; G9; G9a; H3-K9-HMTase 3; histone H3-K9 methyltransferase 3; histone-lysine N-methyltransferase EHMT2; histone-lysine N-methyltransferase, H3 lysine-9 specific 3; HLA-B associated transcript 8; HLA-B-associated transcript 8; KMT1C; NG3; NG36
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,117,427 - 35,133,049 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,117,445 - 35,133,028 (+)EnsemblGRCm39 Ensembl
GRCm381734,898,463 - 34,914,073 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,898,469 - 34,914,052 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,035,444 - 35,050,992 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,506,555 - 34,522,103 (+)NCBIMGSCv36mm8
Celera1737,993,807 - 38,010,279 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-vinylcyclohexene dioxide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetylsalicylic acid  (ISO)
afatinib  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (EXP,ISO)
amitrole  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
Bisphenol A diglycidyl ether  (EXP)
bisphenol F  (ISO)
bortezomib  (ISO)
C60 fullerene  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP)
caffeine  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
cocaine  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
desferrioxamine B  (ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dicrotophos  (ISO)
dimethylarsinic acid  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
FR900359  (ISO)
glyphosate  (ISO)
hydralazine  (ISO)
hydroquinone  (ISO)
hypochlorous acid  (EXP)
ivermectin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
methamphetamine  (EXP)
methidathion  (EXP)
methimazole  (ISO)
methoxychlor  (EXP)
morphine  (EXP)
myo-inositol hexakisphosphate  (EXP)
nickel atom  (ISO)
nickel sulfate  (ISO)
nitric oxide  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
phenylmercury acetate  (ISO)
potassium dichromate  (ISO)
rimonabant  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sepantronium  (ISO)
sodium arsenite  (EXP,ISO)
sulfadimethoxine  (ISO)
sulindac  (ISO)
testosterone  (EXP)
triptonide  (EXP)
urethane  (EXP,ISO)
valproic acid  (EXP,ISO)
zearalenone  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromatin  (IBA,ISO)
chromosome  (IEA)
nuclear speck  (ISO)
nucleolus  (IDA)
nucleoplasm  (ISO,TAS)
nucleus  (IBA,IDA,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal apoptosis  (IAGP)
abnormal cell physiology  (IAGP)
abnormal female meiosis  (IAGP)
abnormal fertility/fecundity  (IAGP)
abnormal gametogenesis  (IAGP)
abnormal imprinting  (IAGP)
abnormal intestinal goblet cell morphology  (IAGP)
abnormal liquid preference  (IAGP)
abnormal locomotor behavior  (IEA)
abnormal neuron physiology  (IAGP)
arrest of male meiosis  (IAGP)
azoospermia  (IAGP)
decreased anxiety-related response  (IAGP)
decreased embryo size  (IAGP)
decreased exploration in new environment  (IAGP)
decreased IgG1 level  (IAGP)
decreased interleukin-13 secretion  (IAGP)
decreased interleukin-4 secretion  (IAGP)
decreased interleukin-5 secretion  (IAGP)
decreased litter size  (IAGP)
decreased locomotor activity  (IAGP)
decreased male germ cell number  (IAGP)
decreased oocyte number  (IAGP)
decreased trophoblast giant cell number  (IAGP)
decreased vertical activity  (IAGP)
embryonic growth arrest  (IAGP)
embryonic growth retardation  (IEA)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
embryonic lethality prior to tooth bud stage  (IEA)
enhanced behavioral response to xenobiotic  (IAGP)
female infertility  (IAGP)
hyperactivity  (IEA)
impaired behavioral response to xenobiotic  (IAGP)
increased IgG2a level  (IAGP)
increased interferon-gamma secretion  (IAGP)
increased interleukin-17 secretion  (IAGP)
increased susceptibility to parasitic infection  (IAGP)
induced hyperactivity  (IAGP)
male infertility  (IAGP)
no abnormal phenotype detected  (IAGP)
obese  (IAGP)
open neural tube  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
prenatal lethality, complete penetrance  (IAGP)
preweaning lethality, complete penetrance  (IEA)
small placenta  (IAGP)
small testis  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Histone lysine methylation dynamics: establishment, regulation, and biological impact. Black JC, etal., Mol Cell. 2012 Nov 30;48(4):491-507. doi: 10.1016/j.molcel.2012.11.006.
2. H3K9 histone methyltransferase G9a promotes lung cancer invasion and metastasis by silencing the cell adhesion molecule Ep-CAM. Chen MW, etal., Cancer Res. 2010 Oct 15;70(20):7830-40. doi: 10.1158/0008-5472.CAN-10-0833. Epub 2010 Oct 12.
3. A central role for G9a and EZH2 in the epigenetic silencing of cyclooxygenase-2 in idiopathic pulmonary fibrosis. Coward WR, etal., FASEB J. 2014 Jul;28(7):3183-96. doi: 10.1096/fj.13-241760. Epub 2014 Mar 20.
4. Genetic variants of methyl metabolizing enzymes and epigenetic regulators: associations with promoter CpG island hypermethylation in colorectal cancer. de Vogel S, etal., Cancer Epidemiol Biomarkers Prev. 2009 Nov;18(11):3086-96. doi: 10.1158/1055-9965.EPI-09-0289. Epub 2009 Oct 20.
5. Fetal Alcohol Exposure Reduces Dopamine Receptor D2 and Increases Pituitary Weight and Prolactin Production via Epigenetic Mechanisms. Gangisetty O, etal., PLoS One. 2015 Oct 28;10(10):e0140699. doi: 10.1371/journal.pone.0140699. eCollection 2015.
6. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
7. The methyltransferase G9a regulates HoxA9-dependent transcription in AML. Lehnertz B, etal., Genes Dev. 2014 Feb 15;28(4):317-27. doi: 10.1101/gad.236794.113.
8. MGDs mouse GO annotations MGD data from the GO Consortium
9. MGD IEA MGD IEA
10. Immunohistochemistry for histone h3 lysine 9 methyltransferase and demethylase proteins in human melanomas. Miura S, etal., Am J Dermatopathol. 2014 Mar;36(3):211-6. doi: 10.1097/DAD.0b013e3182964e02.
11. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
12. Readout of epigenetic modifications. Patel DJ and Wang Z, Annu Rev Biochem. 2013;82:81-118. doi: 10.1146/annurev-biochem-072711-165700.
13. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
14. Mouse MP Annotation Import Pipeline RGD automated import pipeline
15. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
16. Abnormal epigenetic modifications in peripheral blood mononuclear cells from patients with alopecia areata. Zhao M, etal., Br J Dermatol. 2012 Feb;166(2):226-73. doi: 10.1111/j.1365-2133.2011.10646.x. Epub 2012 Jan 9.
17. Overexpressions of G9a and MCM7 in Esophageal Squamous Cell Carcinoma Associated with Poor Prognosis. Zhong X, etal., Histopathology. 2014 May 7. doi: 10.1111/his.12456.
Additional References at PubMed
PMID:7993390   PMID:8889548   PMID:10349636   PMID:10871872   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11316813   PMID:11707778   PMID:12130538   PMID:12477932  
PMID:12586828   PMID:14610273   PMID:14656967   PMID:14681479   PMID:15485804   PMID:15489334   PMID:15493016   PMID:15774718   PMID:15782199   PMID:15788566   PMID:15907476   PMID:15939934  
PMID:16141072   PMID:16141073   PMID:16185068   PMID:16415856   PMID:16602821   PMID:16688220   PMID:16702210   PMID:16982742   PMID:17145766   PMID:17212651   PMID:17392792   PMID:17599069  
PMID:17707230   PMID:17707231   PMID:17962312   PMID:17967808   PMID:18022353   PMID:18039842   PMID:18264113   PMID:18480470   PMID:18535151   PMID:18566414   PMID:18619962   PMID:18818693  
PMID:18818694   PMID:18953337   PMID:18988810   PMID:19010785   PMID:19144645   PMID:19531572   PMID:19778926   PMID:19822740   PMID:19889976   PMID:20005824   PMID:20056891   PMID:20059953  
PMID:20211142   PMID:20421388   PMID:20569692   PMID:20573702   PMID:20671280   PMID:21149390   PMID:21267068   PMID:21402781   PMID:21427230   PMID:21731673   PMID:21825155   PMID:21867882  
PMID:21873635   PMID:21896631   PMID:21984853   PMID:22086334   PMID:22215600   PMID:22387026   PMID:22406531   PMID:22430489   PMID:22504302   PMID:22639370   PMID:22770845   PMID:22880885  
PMID:23087213   PMID:23112189   PMID:23151507   PMID:23178591   PMID:23223288   PMID:23242650   PMID:23283977   PMID:23284137   PMID:23333759   PMID:23396011   PMID:23512806   PMID:23748610  
PMID:23892084   PMID:23892456   PMID:23918802   PMID:24009519   PMID:24019522   PMID:24078251   PMID:24120360   PMID:24196706   PMID:24300108   PMID:24389103   PMID:24457600   PMID:24553289  
PMID:24584053   PMID:24667637   PMID:24735877   PMID:24990928   PMID:25071150   PMID:25276231   PMID:25437545   PMID:25502336   PMID:25637356   PMID:25680957   PMID:25812847   PMID:25863961  
PMID:26192994   PMID:26206133   PMID:26320100   PMID:26551560   PMID:26576615   PMID:26917724   PMID:26952936   PMID:27056598   PMID:27060504   PMID:27083448   PMID:27229136   PMID:27239264  
PMID:27298444   PMID:27874088   PMID:27893464   PMID:27927796   PMID:27932493   PMID:28087629   PMID:28128212   PMID:28250819   PMID:28278257   PMID:28455378   PMID:28527696   PMID:28671696  
PMID:28698219   PMID:28778944   PMID:28949961   PMID:28963472   PMID:29101051   PMID:29146735   PMID:29554304   PMID:29650963   PMID:29720423   PMID:29745895   PMID:29774081   PMID:29795351  
PMID:30455462   PMID:30595499   PMID:30700744   PMID:30710318   PMID:30943408   PMID:31088968   PMID:31095524   PMID:31515511   PMID:32024693   PMID:32325033   PMID:32344102   PMID:32402271  
PMID:32482889   PMID:32541003   PMID:32552834   PMID:32976761   PMID:32994276   PMID:33099471   PMID:33147463   PMID:33311485   PMID:33468997   PMID:33609736   PMID:33768715   PMID:34150743  
PMID:34249932   PMID:34321999   PMID:34368113   PMID:34383386   PMID:34709266   PMID:34793451   PMID:35084365   PMID:35347798   PMID:35751391   PMID:35864958   PMID:35983994   PMID:36010679  
PMID:36272457   PMID:36551904   PMID:36971192   PMID:37253782   PMID:37307824   PMID:37470706   PMID:37739945   PMID:37871034   PMID:38142940   PMID:38167468  


Genomics

Comparative Map Data
Ehmt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,117,427 - 35,133,049 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,117,445 - 35,133,028 (+)EnsemblGRCm39 Ensembl
GRCm381734,898,463 - 34,914,073 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,898,469 - 34,914,052 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,035,444 - 35,050,992 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,506,555 - 34,522,103 (+)NCBIMGSCv36mm8
Celera1737,993,807 - 38,010,279 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.45NCBI
EHMT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38631,879,759 - 31,897,698 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl631,879,759 - 31,897,698 (-)EnsemblGRCh38hg38GRCh38
GRCh37631,847,536 - 31,865,475 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36631,955,515 - 31,973,443 (-)NCBINCBI36Build 36hg18NCBI36
Celera633,446,117 - 33,464,048 (-)NCBICelera
Cytogenetic Map6p21.33NCBI
HuRef631,633,340 - 31,651,520 (-)NCBIHuRef
CHM1_1631,849,677 - 31,867,605 (-)NCBICHM1_1
T2T-CHM13v2.0631,732,994 - 31,750,940 (-)NCBIT2T-CHM13v2.0
Ehmt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8203,924,263 - 3,941,238 (-)NCBIGRCr8
mRatBN7.2203,919,623 - 3,936,751 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl203,919,624 - 3,941,547 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx204,619,529 - 4,635,983 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0203,981,271 - 3,997,725 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0204,518,475 - 4,534,917 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0204,576,033 - 4,592,980 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,576,057 - 4,592,980 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,656,049 - 6,672,967 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,021,679 - 4,033,709 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1204,021,905 - 4,033,936 (-)NCBI
Celera204,093,733 - 4,109,892 (+)NCBICelera
Cytogenetic Map20p12NCBI
Ehmt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955437396,742 - 411,144 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955437396,736 - 411,144 (-)NCBIChiLan1.0ChiLan1.0
EHMT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2546,358,802 - 46,376,755 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1642,320,293 - 42,338,260 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,542,946 - 31,560,894 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,429,265 - 32,446,860 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl632,429,271 - 32,451,844 (-)Ensemblpanpan1.1panPan2
EHMT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,341,202 - 1,354,602 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl121,341,191 - 1,354,584 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,476,470 - 1,489,841 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0121,483,381 - 1,496,739 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl121,483,381 - 1,497,535 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1121,341,088 - 1,354,451 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0121,409,030 - 1,422,401 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,474,485 - 1,487,852 (-)NCBIUU_Cfam_GSD_1.0
Ehmt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494635,898,050 - 35,912,895 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367271,648,448 - 1,663,455 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367271,648,451 - 1,663,294 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EHMT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl723,977,683 - 23,993,478 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1723,977,683 - 23,992,673 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2727,818,555 - 27,834,344 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EHMT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11740,123,935 - 40,141,942 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1740,124,640 - 40,141,616 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604431,794,809 - 31,812,826 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ehmt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475424,354,284 - 24,368,638 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475424,354,271 - 24,368,319 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ehmt2
147 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3286
Count of miRNA genes:750
Interacting mature miRNAs:984
Transcripts:ENSMUST00000013931, ENSMUST00000078061, ENSMUST00000097342, ENSMUST00000114033, ENSMUST00000124002, ENSMUST00000124846, ENSMUST00000131915, ENSMUST00000137071, ENSMUST00000138500, ENSMUST00000145201, ENSMUST00000145624, ENSMUST00000146418, ENSMUST00000150786, ENSMUST00000172921
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173381972136250180Mouse
1301759Sles1_msystemic lupus erythmatosus suppressor 1 (mouse)Not determined173421989035175937Mouse

Markers in Region
D17Ertd710e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,913,812 - 34,914,036UniSTSGRCm38
MGSCv371735,050,757 - 35,050,981UniSTSGRCm37
Celera1738,010,044 - 38,010,268UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17B2UniSTS
cM Map1718.0UniSTS
cM Map1718.87UniSTS
UniSTS:237636  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,912,665 - 34,912,806UniSTSGRCm38
MGSCv371735,049,610 - 35,049,751UniSTSGRCm37
Celera1738,008,897 - 38,009,038UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.87UniSTS
Ehmt2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17B1UniSTS
cM Map1718.87UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001286573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_147151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001782028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003952076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_876459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB077209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB077210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF109906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC096670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ181159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU406966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU463176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000013931   ⟹   ENSMUSP00000013931
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,117,947 - 35,133,027 (+)Ensembl
GRCm38.p6 Ensembl1734,898,971 - 34,914,051 (+)Ensembl
RefSeq Acc Id: ENSMUST00000078061   ⟹   ENSMUSP00000077208
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,117,475 - 35,133,023 (+)Ensembl
GRCm38.p6 Ensembl1734,898,499 - 34,914,047 (+)Ensembl
RefSeq Acc Id: ENSMUST00000097342   ⟹   ENSMUSP00000094955
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,117,930 - 35,133,020 (+)Ensembl
GRCm38.p6 Ensembl1734,898,954 - 34,914,044 (+)Ensembl
RefSeq Acc Id: ENSMUST00000114033   ⟹   ENSMUSP00000109667
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,117,445 - 35,133,027 (+)Ensembl
GRCm38.p6 Ensembl1734,898,469 - 34,914,051 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124002
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,129,951 - 35,133,028 (+)Ensembl
GRCm38.p6 Ensembl1734,910,975 - 34,914,052 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124846   ⟹   ENSMUSP00000121838
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,124,978 - 35,127,534 (+)Ensembl
GRCm38.p6 Ensembl1734,906,002 - 34,908,558 (+)Ensembl
RefSeq Acc Id: ENSMUST00000131915
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,125,720 - 35,127,419 (+)Ensembl
GRCm38.p6 Ensembl1734,906,744 - 34,908,443 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137071   ⟹   ENSMUSP00000134749
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,126,374 - 35,133,023 (+)Ensembl
GRCm38.p6 Ensembl1734,907,398 - 34,914,047 (+)Ensembl
RefSeq Acc Id: ENSMUST00000138500
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,124,179 - 35,125,227 (+)Ensembl
GRCm38.p6 Ensembl1734,905,203 - 34,906,251 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145201
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,127,621 - 35,130,478 (+)Ensembl
GRCm38.p6 Ensembl1734,908,645 - 34,911,502 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145624
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,124,886 - 35,125,601 (+)Ensembl
GRCm38.p6 Ensembl1734,905,910 - 34,906,625 (+)Ensembl
RefSeq Acc Id: ENSMUST00000146418
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,118,670 - 35,121,600 (+)Ensembl
GRCm38.p6 Ensembl1734,899,694 - 34,902,624 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150786
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,124,216 - 35,125,016 (+)Ensembl
GRCm38.p6 Ensembl1734,905,240 - 34,906,040 (+)Ensembl
RefSeq Acc Id: ENSMUST00000172921   ⟹   ENSMUSP00000134089
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,126,376 - 35,127,778 (+)Ensembl
GRCm38.p6 Ensembl1734,907,400 - 34,908,802 (+)Ensembl
RefSeq Acc Id: NM_001286573   ⟹   NP_001273502
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,946 - 35,133,049 (+)NCBI
GRCm381734,898,970 - 34,914,073 (+)NCBI
Celera1737,993,800 - 38,010,283 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001286575   ⟹   NP_001273504
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,450 - 35,133,049 (+)NCBI
GRCm381734,898,474 - 34,914,073 (+)NCBI
Celera1737,993,800 - 38,010,283 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001403867   ⟹   NP_001390796
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,574 - 35,133,049 (+)NCBI
RefSeq Acc Id: NM_001403869   ⟹   NP_001390798
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,574 - 35,133,049 (+)NCBI
RefSeq Acc Id: NM_001403870   ⟹   NP_001390799
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,450 - 35,133,049 (+)NCBI
RefSeq Acc Id: NM_145830   ⟹   NP_665829
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,946 - 35,133,049 (+)NCBI
GRCm381734,898,970 - 34,914,073 (+)NCBI
MGSCv371735,035,444 - 35,050,992 (+)RGD
Celera1737,993,800 - 38,010,283 (+)NCBI
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_147151   ⟹   NP_671493
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,450 - 35,133,049 (+)NCBI
GRCm381734,898,474 - 34,914,073 (+)NCBI
MGSCv371735,035,444 - 35,050,992 (+)RGD
Celera1737,993,800 - 38,010,283 (+)NCBI
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030249448   ⟹   XP_030105308
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,427 - 35,133,027 (+)NCBI
GRCm381734,898,463 - 34,914,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160260   ⟹   XP_036016153
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,118,043 - 35,133,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160261   ⟹   XP_036016154
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,458 - 35,133,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160262   ⟹   XP_036016155
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,118,043 - 35,133,027 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001782028
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,581 - 35,133,027 (+)NCBI
GRCm381734,898,959 - 34,914,051 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003952076
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,581 - 35,133,027 (+)NCBI
GRCm381734,898,959 - 34,914,051 (+)NCBI
Sequence:
RefSeq Acc Id: XR_876459
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,117,581 - 35,133,027 (+)NCBI
GRCm381734,898,959 - 34,914,051 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001273502 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273504 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390796 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390798 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390799 (Get FASTA)   NCBI Sequence Viewer  
  NP_665829 (Get FASTA)   NCBI Sequence Viewer  
  NP_671493 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105308 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016153 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016154 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016155 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC84164 (Get FASTA)   NCBI Sequence Viewer  
  AAC84165 (Get FASTA)   NCBI Sequence Viewer  
  AAH25539 (Get FASTA)   NCBI Sequence Viewer  
  AAH58357 (Get FASTA)   NCBI Sequence Viewer  
  BAC05482 (Get FASTA)   NCBI Sequence Viewer  
  BAC05483 (Get FASTA)   NCBI Sequence Viewer  
  BAC36989 (Get FASTA)   NCBI Sequence Viewer  
  BAE32462 (Get FASTA)   NCBI Sequence Viewer  
  EDL26724 (Get FASTA)   NCBI Sequence Viewer  
  EDL26725 (Get FASTA)   NCBI Sequence Viewer  
  EDL26726 (Get FASTA)   NCBI Sequence Viewer  
  EDL26727 (Get FASTA)   NCBI Sequence Viewer  
  EDL26728 (Get FASTA)   NCBI Sequence Viewer  
  EDL26729 (Get FASTA)   NCBI Sequence Viewer  
  EDL26730 (Get FASTA)   NCBI Sequence Viewer  
  EDL26731 (Get FASTA)   NCBI Sequence Viewer  
  EDL26732 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000013931
  ENSMUSP00000013931.6
  ENSMUSP00000077208
  ENSMUSP00000077208.7
  ENSMUSP00000094955
  ENSMUSP00000094955.4
  ENSMUSP00000109667
  ENSMUSP00000109667.3
  ENSMUSP00000121838.2
  ENSMUSP00000134089.2
  ENSMUSP00000134749.2
GenBank Protein Q9Z148 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_671493   ⟸   NM_147151
- Peptide Label: isoform b
- UniProtKB: Q3U4G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_665829   ⟸   NM_145830
- Peptide Label: isoform a
- UniProtKB: Q8K4R7 (UniProtKB/Swiss-Prot),   Q8K4R6 (UniProtKB/Swiss-Prot),   Q6PE08 (UniProtKB/Swiss-Prot),   A2CG75 (UniProtKB/Swiss-Prot),   Q9Z149 (UniProtKB/Swiss-Prot),   Q9Z148 (UniProtKB/Swiss-Prot),   Q3U4G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273504   ⟸   NM_001286575
- Peptide Label: isoform d
- UniProtKB: Q3U4G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273502   ⟸   NM_001286573
- Peptide Label: isoform c
- UniProtKB: A2CG76 (UniProtKB/TrEMBL),   Q3U4G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030105308   ⟸   XM_030249448
- Peptide Label: isoform X4
- UniProtKB: Q3U4G9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000121838   ⟸   ENSMUST00000124846
RefSeq Acc Id: ENSMUSP00000134089   ⟸   ENSMUST00000172921
RefSeq Acc Id: ENSMUSP00000013931   ⟸   ENSMUST00000013931
RefSeq Acc Id: ENSMUSP00000109667   ⟸   ENSMUST00000114033
RefSeq Acc Id: ENSMUSP00000077208   ⟸   ENSMUST00000078061
RefSeq Acc Id: ENSMUSP00000134749   ⟸   ENSMUST00000137071
RefSeq Acc Id: ENSMUSP00000094955   ⟸   ENSMUST00000097342
RefSeq Acc Id: XP_036016154   ⟸   XM_036160261
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036016153   ⟸   XM_036160260
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036016155   ⟸   XM_036160262
- Peptide Label: isoform X6
RefSeq Acc Id: NP_001390799   ⟸   NM_001403870
- Peptide Label: isoform g
RefSeq Acc Id: NP_001390796   ⟸   NM_001403867
- Peptide Label: isoform e
RefSeq Acc Id: NP_001390798   ⟸   NM_001403869
- Peptide Label: isoform f
Protein Domains
EHMT1/2 cysteine-rich region   Post-SET   Pre-SET   SET

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z148-F1-model_v2 AlphaFold Q9Z148 1-1263 view protein structure

Promoters
RGD ID:13675756
Promoter ID:EPDNEW_M22027
Type:multiple initiation site
Name:Ehmt2_2
Description:Mus musculus euchromatic histone lysine N-methyltransferase 2, transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22028  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,898,487 - 34,898,547EPDNEW
RGD ID:13675758
Promoter ID:EPDNEW_M22028
Type:multiple initiation site
Name:Ehmt2_1
Description:Mus musculus euchromatic histone lysine N-methyltransferase 2, transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22027  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,898,970 - 34,899,030EPDNEW
RGD ID:6828031
Promoter ID:MM_KWN:23238
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000114028,   NM_147151,   OTTMUST00000039149,   OTTMUST00000039150,   OTTMUST00000039154,   UC008CEE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,034,906 - 35,036,712 (+)MPROMDB
RGD ID:6828032
Promoter ID:MM_KWN:23239
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   Brain
Transcripts:OTTMUST00000039152,   OTTMUST00000039153
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,041,504 - 35,042,004 (+)MPROMDB
RGD ID:6828034
Promoter ID:MM_KWN:23240
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Brain
Transcripts:OTTMUST00000039155,   OTTMUST00000039156
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,042,356 - 35,042,912 (+)MPROMDB
RGD ID:6828137
Promoter ID:MM_KWN:23241
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000039157,   OTTMUST00000048540,   UC008CEF.1,   UC008CEG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,042,841 - 35,043,892 (+)MPROMDB
RGD ID:6828033
Promoter ID:MM_KWN:23242
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B6,   Spleen
Transcripts:OTTMUST00000039158
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,044,606 - 35,045,862 (+)MPROMDB
RGD ID:6828035
Promoter ID:MM_KWN:23243
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000039159
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,047,856 - 35,048,497 (+)MPROMDB
RGD ID:6848683
Promoter ID:MM_TRO:4321
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Brain,   Kidney
Transcripts:MTR000166.17.1003.5
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,048,549 - 35,049,049 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2148922 AgrOrtholog
Ensembl Genes ENSMUSG00000013787 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000013931 ENTREZGENE
  ENSMUST00000013931.12 UniProtKB/Swiss-Prot
  ENSMUST00000078061 ENTREZGENE
  ENSMUST00000078061.13 UniProtKB/Swiss-Prot
  ENSMUST00000097342 ENTREZGENE
  ENSMUST00000097342.10 UniProtKB/TrEMBL
  ENSMUST00000114033 ENTREZGENE
  ENSMUST00000114033.9 UniProtKB/Swiss-Prot
  ENSMUST00000124846.8 UniProtKB/TrEMBL
  ENSMUST00000137071.8 UniProtKB/TrEMBL
  ENSMUST00000172921.3 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.170.270.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EHMT1/EHMT2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EHMT2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EHMT_ZBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pre-SET_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SET_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SET_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:110147 UniProtKB/Swiss-Prot
MGD MGI:2148922 ENTREZGENE
NCBI Gene 110147 ENTREZGENE
PANTHER PTHR46307 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR46307:SF1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ank UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
  EHMT1-2_CRR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pre-SET UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SET UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ehmt2 PhenoGen
PRINTS ANKYRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PRE_SET UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SET UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PreSET UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SET UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF82199 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2CG75 ENTREZGENE
  A2CG76 ENTREZGENE, UniProtKB/TrEMBL
  A2CG77_MOUSE UniProtKB/TrEMBL
  EHMT2_MOUSE UniProtKB/Swiss-Prot
  G3UYH7_MOUSE UniProtKB/TrEMBL
  H3BIW5_MOUSE UniProtKB/TrEMBL
  Q3U4G9 ENTREZGENE, UniProtKB/TrEMBL
  Q6PE08 ENTREZGENE
  Q8BP38_MOUSE UniProtKB/TrEMBL
  Q8K4R6 ENTREZGENE
  Q8K4R7 ENTREZGENE
  Q9Z148 ENTREZGENE
  Q9Z149 ENTREZGENE
UniProt Secondary A2CG75 UniProtKB/Swiss-Prot
  Q6PE08 UniProtKB/Swiss-Prot
  Q8K4R6 UniProtKB/Swiss-Prot
  Q8K4R7 UniProtKB/Swiss-Prot
  Q9Z149 UniProtKB/Swiss-Prot