Gene: Smpd1 (sphingomyelin phosphodiesterase 1) Rattus norvegicus
Symbol: Smpd1
Name: sphingomyelin phosphodiesterase 1
Description: ENCODES a protein that exhibits acid sphingomyelin phosphodiesterase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN ceramide biosynthetic process; positive regulation of apoptotic process; response to cocaine; PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH Diabetes Mellitus, Experimental; Hepatolenticular Degeneration; Ceroid Lipofuscinosis, Neuronal, 6 (ortholog); FOUND IN extracellular space; lamellar body; endosome (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; bezafibrate; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC94748; sphingomyelin phosphodiesterase; sphingomyelin phosphodiesterase 1, acid lysosomal
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01170,383,682 - 170,387,525 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01177,389,588 - 177,393,431 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41163,278,970 - 163,282,813 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1157,825,620 - 157,829,463 (+)NCBI
Cytogenetic Map1q33NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Smpd1
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1549719
Created: 2005-09-15
Species: Rattus norvegicus
Last Modified: 2016-05-31
Status: ACTIVE