CDC42EP4 (CDC42 effector protein 4)

Gene: CDC42EP4 (CDC42 effector protein 4) Sus scrofa

Analyze

Symbol:

CDC42EP4

Name:

CDC42 effector protein 4

RGD ID:

14259032

Description:

ENCODES a protein that exhibits small GTPase binding (inferred); INVOLVED IN cellular response to type II interferon (ortholog); Rho protein signal transduction (ortholog); FOUND IN actin cytoskeleton (inferred); adherens junction (inferred); cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	7,638,085 - 7,660,186 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	7,637,797 - 7,660,189 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	7,918,360 - 7,940,485 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to type II interferon (IEA,ISO)

positive regulation of actin filament polymerization (IBA,IEA)

positive regulation of pseudopodium assembly (IBA,IEA)

regulation of cell shape (IBA,IEA)

Rho protein signal transduction (IBA,IEA,ISO)

Cellular Component

actin cytoskeleton (IEA)

adherens junction (IEA)

cytoplasm (IBA,IEA)

cytoskeleton (IBA)

endomembrane system (IEA)

membrane (IEA)

microtubule cytoskeleton (IEA)

phagocytic vesicle (IEA)

plasma membrane (IBA,IEA)

Molecular Function

protein binding (ISO)

small GTPase binding (IBA,IEA)

References

Genomics

Comparative Map Data

CDC42EP4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	7,638,085 - 7,660,186 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	7,637,797 - 7,660,189 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	7,918,360 - 7,940,485 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CDC42EP4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	73,283,624 - 73,312,001 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	73,283,624 - 73,312,005 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	71,279,763 - 71,308,140 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	68,791,358 - 68,819,738 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	68,791,358 - 68,819,738	NCBI
Celera	17	67,862,911 - 67,891,275 (-)	NCBI		Celera
Cytogenetic Map	17	q25.1	NCBI
HuRef	17	66,689,114 - 66,717,308 (-)	NCBI		HuRef
CHM1_1	17	71,343,840 - 71,373,048 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	74,173,348 - 74,201,822 (-)	NCBI		T2T-CHM13v2.0

Cdc42ep4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	113,617,676 - 113,643,369 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	113,617,676 - 113,642,707 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	113,726,850 - 113,752,543 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	113,726,850 - 113,751,881 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	113,588,164 - 113,613,129 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	113,542,940 - 113,567,408 (-)	NCBI		MGSCv36	mm8
Celera	11	125,491,736 - 125,518,895 (-)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	79.22	NCBI

Cdc42ep4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	99,271,750 - 99,298,551 (-)	NCBI		GRCr8
mRatBN7.2	10	98,772,613 - 98,797,924 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	98,772,495 - 98,797,695 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	103,830,115 - 103,854,700 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	103,293,171 - 103,317,759 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	98,692,638 - 98,717,232 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	102,244,680 - 102,269,272 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	102,244,681 - 102,269,272 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	101,923,476 - 101,947,679 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	103,365,895 - 103,390,663 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	103,380,264 - 103,405,048 (-)	NCBI
Celera	10	97,379,485 - 97,404,067 (-)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

Cdc42ep4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955553	313,376 - 314,422 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955553	311,725 - 335,125 (-)	NCBI	ChiLan1.0	ChiLan1.0

CDC42EP4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	89,301,929 - 89,329,228 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	94,126,841 - 94,154,118 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	67,212,571 - 67,239,844 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	72,666,941 - 72,797,808 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

CDC42EP4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	6,888,183 - 6,909,986 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	6,907,205 - 6,964,626 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	7,507,773 - 7,529,595 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	7,559,010 - 7,580,823 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	7,578,145 - 7,579,175 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	7,599,505 - 7,621,303 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	7,702,392 - 7,724,167 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	7,763,144 - 7,784,960 (+)	NCBI		UU_Cfam_GSD_1.0

Cdc42ep4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	7,445,938 - 7,465,090 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936655	961,017 - 962,084 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936655	943,754 - 963,018 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CDC42EP4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	48,331,092 - 48,358,301 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	48,355,463 - 48,356,533 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	19,151,097 - 19,179,345 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cdc42ep4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624801	3,372,778 - 3,394,855 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CDC42EP4
882 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	2			2		1		2
Low	8	4	3	3	2	22	2	1	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003131243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003357994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK394175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK397616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK400730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK400815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU928109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01071436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000018774 ⟹ ENSSSCP00000018272

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	7,638,085 - 7,660,186 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000058168 ⟹ ENSSSCP00000052917

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	7,638,985 - 7,660,186 (+)	Ensembl

RefSeq Acc Id:

XM_003131243 ⟹ XP_003131291

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	7,637,797 - 7,660,188 (+)	NCBI

Sequence:

show sequence

CTGGGGGCGGCCTCGTGCTCGGCCCCCGGGGGGAGTCGCGCTGCTGGCCCCGGGAGCCCCGGGG
TGGGGGGATCCAGGCCCCGGAGCGCAGCAAGGAGGGGCGCCCCGGGACCTGGCCGGCCTCCCGA
ACCGCCCCTCACGAAGCTCCCAAAGTCACAGGCTTTCAGATTTGAACCGAGGAGGCCGAGCGGC
CGGGCTGAGGTTCCCAACCGCCATTGGCTGCGGCGGCGCCGTGACATCAGCGCGGGGGCTGCGG
GGCGGGGAGGGTGCGGGAGGAGCCGGGAAGGGGAGTGTCCGAGCGGCTCCCTGCCCTGAAAGCT
GGAGCCCGAGGAAACAGACGCCGGCGCGGACATGGGCCGCCAGCCCCGCCGCCTCGCGGAGCCC
ACCGAGGGGACAGCGCAGCCGCGCCGGCTCGGCGCTCGCGTCTCTGGGGACCCAGCCTTATGAT
CACCTCCTTATCGCCCCCTCCACCCGCCGGACTTCAGATCTGACCCCAGATCCACCTGTTGCTT
AGAGGGACCCCTCCCCTCCGGCAAGATGCCGATCCTCAAGCAGCTGGTGTCCAGCTCCGTACAC
TCCAAGCGTCGCTCCCGAGTGGACCTCACGGCTGAGATGATCAGTGCCCCGCTGGGTGACTTCC
GCCACACCATGCACGTGGGCCGGGCGGGGGACGCCTTTGGGGACACTTCCTTTCTCAACAGCAA
GGCCGGGGAGCTGGACAGTGAGTCCATGGACGAGCAGGCCTCCTCCTCGTCCTCTAAACGCAGC
CTCCTCTCCCGGAAGTTCCGGGGCAGCAAGCGGTCGCAGTCAGTGACCAGGGGGGACCGGGAGC
AGAGGGACATGCTGGGCTCCCTGCGGGACTCGGCCCTCTTCGTCAAGAATGCCATGTCCCTGCC
CCAGCTGAACGAGAAGGAGGCCGCAGAGAAGGGCTCCAGCAAGCTCCCCAAGAGCCTGTCGTCC
AGCCCCGTGAAGAAGGCCAGCGGGGAGGGCAGCCCGGAGGAGGCGGGCGTGGAGGAGGCCGTGC
CCCGGCGGAACGGGGCTGCCGCCCCCCACTCCCCAGACCCCCTCCTCGACGAGCAGGCCTTCGG
GGACCTGACGGATCTGCCCATCGTGCCCAAGGCCAGCTTCGGGCTGAAGCACGCCGAGTCCATC
ATGTCTTTCCACATCGACCTGGGGCCCTCCATGCTGGGCGATGTCCTCAGCATCATGGACAAGG
AGGAGTGGGAAGCCCAGGAGGAGGATGGCGGTTACCATGGTGACGATGACCCAGCAGGCAGCCC
CTCCCAGGCTCCACCTTCGGCGTCAGCCCCTCCCCTGGCAAGGCCGGAAGGCGAGGGGGGCCCG
GACTTGCCCCCGCTGCCCTCCCGCGCCCTGCAGGATGAGGGCTGGGCGGCGGCGGCGGCGGCTG
CCCCCAGCCCCGGCTCGGCCCGTAGTGAGGGCAGCCACACCACGCGGGACAGCAGCTCCCTGTC
CAGCTGCACCTCGGGTGTCCTGGAGGAGCGCAGCCCCGCCTTCCGCGGGCCGGACCGGGCCCGG
GCCACCCTCCCGAGGCAGCCTGACACCGAGTTCTCCTTCATGGATGAGGAGGAAGAGGATGAGA
TCCGAGTGTGAGGCGGGCGGAGGCGGGGCTCTTGGTTTCGTCCCCTCCCCGCCGCCAGCATGCG
GGGGCAGCCAAGAGCCTGGCTTCAGGCCACAGACCCTGGACTCCATGGATGAGGGGCCTTGGCT
GAGCTTCGGGGCCGTGGGGGACTTGGGGAGCTGACTTGGGTGTCTGACTTCTTTGCCCACCCTG
CCCTGCCGTGCCCAAGCTCTGTCAGAAGTGGCTTCCCTCTCCGGGCCTCCCTTTTCCTCCACCT
TGGCCTCCAGTGGCTGCCAGCTGTCAACCTGAGTCCTTGGCACGTGCAGCCAGAGCGGGGCAGC
CCGGCGGTGCCAGAGCTAAATACACTTGACTCACCTCTTTTCTCCTGGCATTTCTGATGTGACC
GCCAGTAGCCGCCGGAATAAATGCGTGTGACAGGTCACAAGTCCCGGGCCCTCCCTCCGCCGGC
CCAGGCCCGGGAAGCCCCTTGGAGGAAAGGCTGCCCGGTGTGTACACTAAACGCCACCCCTTCT
GGGGGGAAGAGAGCAGGATGCAGAATGGAAGGAAGGCCCCTGGGCTTCTTGAATTTTCAAGAAG
GGGACCCTTCCAGGATGACACTAGAAACGCTGTGGCCCTCTGCTCAGTCCCTGTGGGTTTGTTT
GTTGTTGTTTTGTTTAAACCCTTCTAAGCAATGTCGGGAACGGTGTTCAGAGAGCTGCCACCGG
AAGGAAAAACGACTCCTTTTAGAAAACCTTGATACTAAGTGCTTCCAAACTTTATTTAGACCTG
TTGGGGTGGGTGACTGCGTGTGTGTGTGTATTTCCTCACTCCCTCCCCCATAGTTATTAACAGC
GGAAGGCAGCCAGTGTAGAAAATTTTTGGAATATGATTCTTTTAAAAGTTGTTATTCCTATGGG
GGGGGATAAAAAGCGCTCTTTTGACTTGTTTCCCACCCCCCCCTCCTTCCGGCCCCATACTGAC
TACTTCCCTTCCTTCCTCAGGCCTCTGCTGCCCTGAAACCCCCTTCCCTACTTCTGAGTCCACA
GCCCTGAGGGTATGGGGTTGCCAGATTTAGCAACAAAACAAAGCAACAGAATGCTGAGTGAAAT
TAGAATTTCAGGCATACAGAGGAGAGTTTTTTAGTATAAATATGCCCCATGCCGTATTTGGAAT
GCACGCGTGCTAAAACAAATTATTCGCTGTTCTTCTGAAATTCAGATTTCACTCTGCATCCGTA
GAAGTGTGCCCAAGGGGATTGAGTCGAGCTTGGGGGTGAGTCCCAGGGTTAATAGATGGCCTGT
TTTTCTGTCCTGGGAACAGGCTGACCCACCTCCTCCTGTCCCCTTGTAGCCAATGGAGGGCGGG
GGCAGACAGAACCACCCCAGGATCCAGCCAGGGCAGGGCACGCAGCTGGCCCGGCCTCCTGGGT
TTTCCCAGATCCAGACTCGGACACTAGTTTAGTTCTTGATCCGTGTGCCCCATTGGTGCTCGTT
GCTAGTGTAGCTCCCTTGGTGGGGGAGGGATTGAAGAGGCTGCGCAGCCCCCACCATCTGCCCT
TGAAACCCATCTAGACAGTGGTCAGTTCCAGATTCTAAACTGCGTTTTTTTTTTTTTTTTTTTT
CCGTGAAAATGTTAAAACAGCAAGGAAACATTAAAAAAGCCTACAGCA

hide sequence

RefSeq Acc Id:

XM_003357994 ⟹ XP_003358042

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	7,638,978 - 7,660,189 (+)	NCBI

Sequence:

show sequence

TTGCGCGGGGTGGGGCCGCTTCCGAGGCCGGGAGGGGACTGCGCGCTGGAGCCGGTGAAGCTTT
CCTGGCCTGGCCACCAGCCGGGAGCGGTCGGTTAATGATTTAACCACCCGCTTGGGGCGGTGGA
ACTGCGATCGGCCGCCTCTAGCTCCGCCCCCTCCTTGGAGCGCCCCCAGGCGGGGGCACAAAAC
TGCCCCCTGCCCCGAGTGCGGCCCCTGGGAGCTCCTCTGCGGGCTGGCCTTATGATCACCTCCT
TATCGCCCCCTCCACCCGCCGGACTTCAGATCTGACCCCAGATCCACCTGTTGCTTAGAGGGAC
CCCTCCCCTCCGGCAAGATGCCGATCCTCAAGCAGCTGGTGTCCAGCTCCGTACACTCCAAGCG
TCGCTCCCGAGTGGACCTCACGGCTGAGATGATCAGTGCCCCGCTGGGTGACTTCCGCCACACC
ATGCACGTGGGCCGGGCGGGGGACGCCTTTGGGGACACTTCCTTTCTCAACAGCAAGGCCGGGG
AGCTGGACAGTGAGTCCATGGACGAGCAGGCCTCCTCCTCGTCCTCTAAACGCAGCCTCCTCTC
CCGGAAGTTCCGGGGCAGCAAGCGGTCGCAGTCAGTGACCAGGGGGGACCGGGAGCAGAGGGAC
ATGCTGGGCTCCCTGCGGGACTCGGCCCTCTTCGTCAAGAATGCCATGTCCCTGCCCCAGCTGA
ACGAGAAGGAGGCCGCAGAGAAGGGCTCCAGCAAGCTCCCCAAGAGCCTGTCGTCCAGCCCCGT
GAAGAAGGCCAGCGGGGAGGGCAGCCCGGAGGAGGCGGGCGTGGAGGAGGCCGTGCCCCGGCGG
AACGGGGCTGCCGCCCCCCACTCCCCAGACCCCCTCCTCGACGAGCAGGCCTTCGGGGACCTGA
CGGATCTGCCCATCGTGCCCAAGGCCAGCTTCGGGCTGAAGCACGCCGAGTCCATCATGTCTTT
CCACATCGACCTGGGGCCCTCCATGCTGGGCGATGTCCTCAGCATCATGGACAAGGAGGAGTGG
GAAGCCCAGGAGGAGGATGGCGGTTACCATGGTGACGATGACCCAGCAGGCAGCCCCTCCCAGG
CTCCACCTTCGGCGTCAGCCCCTCCCCTGGCAAGGCCGGAAGGCGAGGGGGGCCCGGACTTGCC
CCCGCTGCCCTCCCGCGCCCTGCAGGATGAGGGCTGGGCGGCGGCGGCGGCGGCTGCCCCCAGC
CCCGGCTCGGCCCGTAGTGAGGGCAGCCACACCACGCGGGACAGCAGCTCCCTGTCCAGCTGCA
CCTCGGGTGTCCTGGAGGAGCGCAGCCCCGCCTTCCGCGGGCCGGACCGGGCCCGGGCCACCCT
CCCGAGGCAGCCTGACACCGAGTTCTCCTTCATGGATGAGGAGGAAGAGGATGAGATCCGAGTG
TGAGGCGGGCGGAGGCGGGGCTCTTGGTTTCGTCCCCTCCCCGCCGCCAGCATGCGGGGGCAGC
CAAGAGCCTGGCTTCAGGCCACAGACCCTGGACTCCATGGATGAGGGGCCTTGGCTGAGCTTCG
GGGCCGTGGGGGACTTGGGGAGCTGACTTGGGTGTCTGACTTCTTTGCCCACCCTGCCCTGCCG
TGCCCAAGCTCTGTCAGAAGTGGCTTCCCTCTCCGGGCCTCCCTTTTCCTCCACCTTGGCCTCC
AGTGGCTGCCAGCTGTCAACCTGAGTCCTTGGCACGTGCAGCCAGAGCGGGGCAGCCCGGCGGT
GCCAGAGCTAAATACACTTGACTCACCTCTTTTCTCCTGGCATTTCTGATGTGACCGCCAGTAG
CCGCCGGAATAAATGCGTGTGACAGGTCACAAGTCCCGGGCCCTCCCTCCGCCGGCCCAGGCCC
GGGAAGCCCCTTGGAGGAAAGGCTGCCCGGTGTGTACACTAAACGCCACCCCTTCTGGGGGGAA
GAGAGCAGGATGCAGAATGGAAGGAAGGCCCCTGGGCTTCTTGAATTTTCAAGAAGGGGACCCT
TCCAGGATGACACTAGAAACGCTGTGGCCCTCTGCTCAGTCCCTGTGGGTTTGTTTGTTGTTGT
TTTGTTTAAACCCTTCTAAGCAATGTCGGGAACGGTGTTCAGAGAGCTGCCACCGGAAGGAAAA
ACGACTCCTTTTAGAAAACCTTGATACTAAGTGCTTCCAAACTTTATTTAGACCTGTTGGGGTG
GGTGACTGCGTGTGTGTGTGTATTTCCTCACTCCCTCCCCCATAGTTATTAACAGCGGAAGGCA
GCCAGTGTAGAAAATTTTTGGAATATGATTCTTTTAAAAGTTGTTATTCCTATGGGGGGGGATA
AAAAGCGCTCTTTTGACTTGTTTCCCACCCCCCCCTCCTTCCGGCCCCATACTGACTACTTCCC
TTCCTTCCTCAGGCCTCTGCTGCCCTGAAACCCCCTTCCCTACTTCTGAGTCCACAGCCCTGAG
GGTATGGGGTTGCCAGATTTAGCAACAAAACAAAGCAACAGAATGCTGAGTGAAATTAGAATTT
CAGGCATACAGAGGAGAGTTTTTTAGTATAAATATGCCCCATGCCGTATTTGGAATGCACGCGT
GCTAAAACAAATTATTCGCTGTTCTTCTGAAATTCAGATTTCACTCTGCATCCGTAGAAGTGTG
CCCAAGGGGATTGAGTCGAGCTTGGGGGTGAGTCCCAGGGTTAATAGATGGCCTGTTTTTCTGT
CCTGGGAACAGGCTGACCCACCTCCTCCTGTCCCCTTGTAGCCAATGGAGGGCGGGGGCAGACA
GAACCACCCCAGGATCCAGCCAGGGCAGGGCACGCAGCTGGCCCGGCCTCCTGGGTTTTCCCAG
ATCCAGACTCGGACACTAGTTTAGTTCTTGATCCGTGTGCCCCATTGGTGCTCGTTGCTAGTGT
AGCTCCCTTGGTGGGGGAGGGATTGAAGAGGCTGCGCAGCCCCCACCATCTGCCCTTGAAACCC
ATCTAGACAGTGGTCAGTTCCAGATTCTAAACTGCGTTTTTTTTTTTTTTTTTTTTCCGTGAAA
ATGTTAAAACAGCAAGGAAACATTAAAAAAGCCTACAGCAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003131291	(Get FASTA)	NCBI Sequence Viewer
	XP_003358042	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000018272
	ENSSSCP00000018272.2
	ENSSSCP00000052917
	ENSSSCP00000052917.1
	ENSSSCP00025037853.1
	ENSSSCP00025037881.1
	ENSSSCP00030029976.1
	ENSSSCP00030029981.1
	ENSSSCP00035004348.1
	ENSSSCP00035004351.1
	ENSSSCP00040010618.1
	ENSSSCP00040010623.1
	ENSSSCP00045024570.1
	ENSSSCP00045024586.1
	ENSSSCP00050033476.1
	ENSSSCP00050033480.1
	ENSSSCP00055018844.1
	ENSSSCP00055018861.1
	ENSSSCP00060044932.1
	ENSSSCP00060044942.1
	ENSSSCP00065045276.1
	ENSSSCP00065045279.1
	ENSSSCP00070003020.1
	ENSSSCP00070003025.1

RefSeq Acc Id:

XP_003131291 ⟸ XM_003131243

- UniProtKB:

F1RV35 (UniProtKB/TrEMBL), A0A4X1SKS7 (UniProtKB/TrEMBL), A0A8D1CAB0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPILKQLVSSSVHSKRRSRVDLTAEMISAPLGDFRHTMHVGRAGDAFGDTSFLNSKAGELDSES
MDEQASSSSSKRSLLSRKFRGSKRSQSVTRGDREQRDMLGSLRDSALFVKNAMSLPQLNEKEAA
EKGSSKLPKSLSSSPVKKASGEGSPEEAGVEEAVPRRNGAAAPHSPDPLLDEQAFGDLTDLPIV
PKASFGLKHAESIMSFHIDLGPSMLGDVLSIMDKEEWEAQEEDGGYHGDDDPAGSPSQAPPSAS
APPLARPEGEGGPDLPPLPSRALQDEGWAAAAAAAPSPGSARSEGSHTTRDSSSLSSCTSGVLE
ERSPAFRGPDRARATLPRQPDTEFSFMDEEEEDEIRV

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RefSeq Acc Id:

XP_003358042 ⟸ XM_003357994

- UniProtKB:

F1RV35 (UniProtKB/TrEMBL), A0A4X1SKS7 (UniProtKB/TrEMBL), A0A8D1CAB0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPILKQLVSSSVHSKRRSRVDLTAEMISAPLGDFRHTMHVGRAGDAFGDTSFLNSKAGELDSES
MDEQASSSSSKRSLLSRKFRGSKRSQSVTRGDREQRDMLGSLRDSALFVKNAMSLPQLNEKEAA
EKGSSKLPKSLSSSPVKKASGEGSPEEAGVEEAVPRRNGAAAPHSPDPLLDEQAFGDLTDLPIV
PKASFGLKHAESIMSFHIDLGPSMLGDVLSIMDKEEWEAQEEDGGYHGDDDPAGSPSQAPPSAS
APPLARPEGEGGPDLPPLPSRALQDEGWAAAAAAAPSPGSARSEGSHTTRDSSSLSSCTSGVLE
ERSPAFRGPDRARATLPRQPDTEFSFMDEEEEDEIRV

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RefSeq Acc Id:

ENSSSCP00000052917 ⟸ ENSSSCT00000058168

RefSeq Acc Id:

ENSSSCP00000018272 ⟸ ENSSSCT00000018774

Protein Domains

CRIB

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000017245	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025063482	UniProtKB/TrEMBL
	ENSSSCG00030047017	UniProtKB/TrEMBL
	ENSSSCG00035010302	UniProtKB/TrEMBL
	ENSSSCG00040018583	UniProtKB/TrEMBL
	ENSSSCG00045020765	UniProtKB/TrEMBL
	ENSSSCG00050057095	UniProtKB/TrEMBL
	ENSSSCG00055012177	UniProtKB/TrEMBL
	ENSSSCG00060075299	UniProtKB/TrEMBL
	ENSSSCG00065074509	UniProtKB/TrEMBL
	ENSSSCG00070001955	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000018774	ENTREZGENE
	ENSSSCT00000018774.4	UniProtKB/TrEMBL
	ENSSSCT00000058168	ENTREZGENE
	ENSSSCT00000058168.3	UniProtKB/TrEMBL
	ENSSSCT00025086928.1	UniProtKB/TrEMBL
	ENSSSCT00025086982.1	UniProtKB/TrEMBL
	ENSSSCT00030065572.1	UniProtKB/TrEMBL
	ENSSSCT00030065581.1	UniProtKB/TrEMBL
	ENSSSCT00035012882.1	UniProtKB/TrEMBL
	ENSSSCT00035012885.1	UniProtKB/TrEMBL
	ENSSSCT00040025098.1	UniProtKB/TrEMBL
	ENSSSCT00040025110.1	UniProtKB/TrEMBL
	ENSSSCT00045035391.1	UniProtKB/TrEMBL
	ENSSSCT00045035411.1	UniProtKB/TrEMBL
	ENSSSCT00050077822.1	UniProtKB/TrEMBL
	ENSSSCT00050077829.1	UniProtKB/TrEMBL
	ENSSSCT00055023822.1	UniProtKB/TrEMBL
	ENSSSCT00055023842.1	UniProtKB/TrEMBL
	ENSSSCT00060103037.1	UniProtKB/TrEMBL
	ENSSSCT00060103056.1	UniProtKB/TrEMBL
	ENSSSCT00065102629.1	UniProtKB/TrEMBL
	ENSSSCT00065102638.1	UniProtKB/TrEMBL
	ENSSSCT00070003640.1	UniProtKB/TrEMBL
	ENSSSCT00070003648.1	UniProtKB/TrEMBL
InterPro	Cdc42_effect	UniProtKB/TrEMBL
	CRIB_dom	UniProtKB/TrEMBL
KEGG Report	ssc:100517117	UniProtKB/TrEMBL
NCBI Gene	CDC42EP4	ENTREZGENE
PANTHER	CDC42 EFFECTOR PROTEIN 4	UniProtKB/TrEMBL
	CDC42 EFFECTOR PROTEIN BORG	UniProtKB/TrEMBL
Pfam	BORG_CEP	UniProtKB/TrEMBL
	PBD	UniProtKB/TrEMBL
PROSITE	CRIB	UniProtKB/TrEMBL
SMART	PBD	UniProtKB/TrEMBL
UniProt	A0A4X1SKS7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1CAB0	ENTREZGENE, UniProtKB/TrEMBL
	F1RV35	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:86458	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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