Spata1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 238,009,403 - 238,054,855 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 235,349,126 - 235,394,578 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 235,349,127 - 235,394,502 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 243,144,843 - 243,190,240 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 241,036,253 - 241,081,648 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 235,902,477 - 235,947,877 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 252,313,293 - 252,359,798 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 252,314,426 - 252,359,798 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 270,841,390 - 270,886,775 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 244,656,916 - 244,702,698 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 244,643,656 - 244,689,438 (-) | NCBI | | | | | Celera | 2 | 227,328,853 - 227,374,213 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q44 | NCBI | | | | |
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SPATA1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 84,506,386 - 84,567,379 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 84,506,300 - 84,567,379 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 84,972,069 - 85,033,062 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 84,744,601 - 84,791,368 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 84,684,033 - 84,730,788 | NCBI | | | | | Celera | 1 | 83,216,252 - 83,262,706 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p22.3 | NCBI | | | | | HuRef | 1 | 83,082,112 - 83,132,210 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 85,086,731 - 85,136,977 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 84,346,767 - 84,407,753 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Spata1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 146,162,955 - 146,205,548 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 146,162,951 - 146,205,508 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 146,457,202 - 146,499,793 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 146,457,196 - 146,499,753 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 146,120,167 - 146,162,717 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 146,394,589 - 146,437,139 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 152,907,200 - 152,944,027 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | H2 | NCBI | | | | | cM Map | 3 | 71.3 | NCBI | | | | |
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Spata1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955423 | 9,336,208 - 9,384,727 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SPATA1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 142,329,371 - 142,436,133 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 141,492,878 - 141,590,593 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 117,054,781 - 117,121,414 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 85,915,597 - 85,966,025 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 85,915,597 - 85,962,650 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SPATA1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 6 | 63,333,426 - 63,389,872 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 63,238,875 - 63,389,925 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 65,982,564 - 66,037,244 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 63,873,918 - 63,928,612 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 63,775,583 - 63,928,915 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 6 | 63,402,224 - 63,456,520 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 63,370,982 - 63,425,224 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 63,876,819 - 63,931,485 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Spata1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SPATA1 (Sus scrofa - pig) |
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SPATA1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 48,791,353 - 48,850,577 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 48,788,105 - 48,840,373 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 68,927,720 - 68,977,926 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Spata1 (Heterocephalus glaber - naked mole-rat) |
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