Crppa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 58,847,550 - 59,124,309 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 53,120,264 - 53,397,030 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 53,121,438 - 53,397,028 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 53,411,532 - 53,688,416 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 53,726,406 - 54,003,317 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 53,200,797 - 53,477,789 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 55,880,136 - 56,159,466 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 55,881,387 - 56,159,464 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 65,490,939 - 65,818,620 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 55,139,155 - 55,419,630 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 55,421,454 - 55,422,754 (+) | NCBI | | | | | Celera | 6 | 52,259,290 - 52,534,570 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q16-q21 | NCBI | | | | |
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CRPPA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 7 | 16,087,525 - 16,421,538 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 16,087,525 - 16,502,504 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 16,127,150 - 16,461,163 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 16,097,786 - 16,427,472 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 7 | 16,106,872 - 16,440,699 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | p21.2 | NCBI | | | | | HuRef | 7 | 16,012,324 - 16,347,484 (-) | NCBI | | HuRef | | | CHM1_1 | 7 | 16,126,841 - 16,460,716 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 16,220,757 - 16,551,280 (-) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 16,180,240 - 16,514,081 (-) | NCBI | | | | |
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Crppa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 12 | 36,430,334 - 36,739,502 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 36,431,449 - 36,739,502 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 36,380,575 - 36,689,503 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 36,381,450 - 36,689,503 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 37,108,106 - 37,416,031 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 36,891,849 - 37,015,131 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 37,825,234 - 38,127,522 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | A3 | NCBI | | | | | cM Map | 12 | 16.84 | NCBI | | | | |
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Crppa (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955410 | 19,359,868 - 19,614,344 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955410 | 19,359,495 - 19,614,283 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CRPPA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 6 | 20,926,262 - 21,257,091 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 7 | 69,249,358 - 69,581,484 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 7 | 16,747,569 - 17,078,389 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 7 | 16,076,235 - 16,405,268 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 7 | 16,077,091 - 16,405,220 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CRPPA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 14 | 30,697,060 - 30,989,423 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 14 | 30,648,128 - 30,989,604 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 14 | 30,218,221 - 30,510,640 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 14 | 30,609,518 - 30,909,358 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 14 | 30,608,023 - 30,908,861 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 14 | 30,712,952 - 31,011,922 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 14 | 30,431,982 - 30,724,382 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 14 | 30,744,230 - 31,036,870 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Crppa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 74,982,852 - 75,270,444 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936546 | 2,657,392 - 2,945,115 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936546 | 2,658,195 - 2,945,542 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CRPPA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 85,422,317 - 85,710,750 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 85,419,401 - 85,711,146 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 94,460,506 - 94,549,186 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CRPPA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 21 | 41,691,771 - 42,008,484 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 21 | 41,691,912 - 42,010,301 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666042 | 62,495,611 - 62,819,031 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Crppa (Heterocephalus glaber - naked mole-rat) |
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