Kyat3 (kynurenine aminotransferase 3) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Kyat3 (kynurenine aminotransferase 3) Rattus norvegicus
Analyze
Symbol: Kyat3
Name: kynurenine aminotransferase 3
RGD ID: 1359262
Description: Predicted to enable kynurenine-glyoxylate transaminase activity; kynurenine-oxoglutarate transaminase activity; and protein homodimerization activity. Predicted to be involved in 2-oxoglutarate metabolic process and kynurenine metabolic process. Predicted to be active in mitochondrion. Orthologous to human KYAT3 (kynurenine aminotransferase 3); PARTICIPATES IN kynurenine metabolic pathway; selenoamino acid metabolic pathway; tryptophan metabolic pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Ccbl2; cysteine conjugate-beta lyase 2; cysteine-S-conjugate beta-lyase 2; Kat3; KATIII; kynurenine aminotransferase III; kynurenine aminotransferase III-like; kynurenine--glyoxylate transaminase; kynurenine--oxoglutarate transaminase 3; kynurenine--oxoglutarate transaminase III; LOC100361841
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82234,362,306 - 234,407,646 (+)NCBIGRCr8
mRatBN7.22231,701,881 - 231,747,462 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2231,701,963 - 231,747,227 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2239,481,372 - 239,526,444 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02237,375,666 - 237,420,734 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02232,239,045 - 232,284,099 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02248,644,473 - 248,690,289 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2248,649,441 - 248,690,089 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02267,169,695 - 267,220,549 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42240,849,349 - 240,857,337 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12240,829,675 - 240,844,071 (+)NCBI
Celera2223,713,699 - 223,757,924 (+)NCBICelera
Cytogenetic Map2q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
acetamide  (EXP)
aflatoxin B1  (EXP,ISO)
aflatoxin M1  (ISO)
antimycin A  (ISO)
aristolochic acid A  (ISO)
Benoxacor  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
buspirone  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (ISO)
chlordecone  (ISO)
chlorpyrifos  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
dioxygen  (ISO)
doxorubicin  (ISO)
fenpyroximate  (ISO)
fluoranthene  (ISO)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
indometacin  (EXP)
inulin  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
methoxychlor  (EXP)
mitomycin C  (ISO)
N-nitrosodiethylamine  (EXP)
okadaic acid  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
PhIP  (EXP)
picoxystrobin  (ISO)
pirinixic acid  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
SB 431542  (ISO)
sodium arsenite  (EXP)
sodium fluoride  (ISO)
Soman  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
tebufenpyrad  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
Triptolide  (ISO)
urethane  (ISO)
vancomycin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
mitochondrion  (IBA,IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Structure, expression, and function of kynurenine aminotransferases in human and rodent brains. Han Q, etal., Cell Mol Life Sci. 2010 Feb;67(3):353-68. doi: 10.1007/s00018-009-0166-4. Epub 2009 Oct 15.
3. The kynurenine pathway and neurodegenerative disease. Maddison DC and Giorgini F, Semin Cell Dev Biol. 2015 Apr;40:134-41. doi: 10.1016/j.semcdb.2015.03.002. Epub 2015 Mar 12.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:16376499   PMID:18614015   PMID:19029248   PMID:22681889  


Genomics

Comparative Map Data
Kyat3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82234,362,306 - 234,407,646 (+)NCBIGRCr8
mRatBN7.22231,701,881 - 231,747,462 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2231,701,963 - 231,747,227 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2239,481,372 - 239,526,444 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02237,375,666 - 237,420,734 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02232,239,045 - 232,284,099 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02248,644,473 - 248,690,289 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2248,649,441 - 248,690,089 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02267,169,695 - 267,220,549 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42240,849,349 - 240,857,337 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12240,829,675 - 240,844,071 (+)NCBI
Celera2223,713,699 - 223,757,924 (+)NCBICelera
Cytogenetic Map2q44NCBI
KYAT3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38188,921,044 - 88,992,960 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl188,935,773 - 88,992,953 (-)EnsemblGRCh38hg38GRCh38
GRCh37189,386,727 - 89,458,643 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36189,174,044 - 89,231,104 (-)NCBINCBI36Build 36hg18NCBI36
Celera187,647,258 - 87,704,434 (-)NCBICelera
Cytogenetic Map1p22.2NCBI
HuRef187,518,867 - 87,576,019 (-)NCBIHuRef
CHM1_1189,516,514 - 89,573,685 (-)NCBICHM1_1
T2T-CHM13v2.0188,764,436 - 88,836,357 (-)NCBIT2T-CHM13v2.0
Kyat3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393142,406,780 - 142,450,672 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3142,406,812 - 142,452,631 (+)EnsemblGRCm39 Ensembl
GRCm383142,701,019 - 142,744,911 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3142,701,051 - 142,746,870 (+)EnsemblGRCm38mm10GRCm38
MGSCv373142,364,044 - 142,407,874 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363142,638,466 - 142,682,296 (+)NCBIMGSCv36mm8
Celera3149,133,370 - 149,177,239 (+)NCBICelera
Cytogenetic Map3H1NCBI
cM Map366.69NCBI
Kyat3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554235,344,562 - 5,391,518 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554235,340,863 - 5,388,460 (+)NCBIChiLan1.0ChiLan1.0
KYAT3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21137,971,448 - 138,049,428 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11137,132,877 - 137,205,094 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0191,636,681 - 91,708,859 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1190,403,072 - 90,460,426 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl190,403,072 - 90,460,426 (-)Ensemblpanpan1.1panPan2
KYAT3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1659,409,715 - 59,473,238 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl659,416,191 - 59,473,232 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha662,118,320 - 62,181,537 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0659,920,984 - 59,984,529 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl659,921,026 - 59,984,531 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1659,486,769 - 59,550,195 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0659,441,849 - 59,505,435 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0659,927,659 - 59,991,112 (+)NCBIUU_Cfam_GSD_1.0
Kyat3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505899,313,496 - 99,361,813 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493673277,427 - 125,816 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KYAT3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4127,451,516 - 127,507,759 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14127,451,475 - 127,507,766 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24139,676,619 - 139,732,902 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KYAT3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12044,416,179 - 44,488,388 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2044,419,712 - 44,488,491 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603373,428,283 - 73,491,315 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kyat3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247428,599,862 - 8,659,110 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kyat3
493 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:41
Count of miRNA genes:39
Interacting mature miRNAs:40
Transcripts:ENSRNOT00000067165
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561249053267Rat
61366Iddm3Insulin dependent diabetes mellitus QTL 34.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2189599258234599258Rat
61398Bp50Blood pressure QTL 504.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189599258234599258Rat
2317752Glom23Glomerulus QTL 233.6urine protein amount (VT:0005160)urine protein level (CMO:0000591)2193452645245889826Rat
1598813Memor9Memory QTL 92.7exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)2199341726234244620Rat
1598835Anxrr18Anxiety related response QTL 182.98body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)2200990457245990457Rat
2298479Eau5Experimental allergic uveoretinitis QTL 50.0021uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)2202446871237938339Rat
7207490Bss111Bone structure and strength QTL 1116.4femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)2211744537249053267Rat
7207482Bss107Bone structure and strength QTL 1077femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)2211744537249053267Rat
7207484Bss108Bone structure and strength QTL 1085.3femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)2211744537249053267Rat
1298075Scl17Serum cholesterol level QTL 173.4blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)2211744537249053267Rat
1549836Bss2Bone structure and strength QTL 27.5femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)2211744537249053267Rat
2317885Alcrsp28Alcohol response QTL 282.10.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2212828222249053267Rat
1300126Bp175Blood pressure QTL 1753.46arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2214226044247136170Rat
2313073Bmd75Bone mineral density QTL 754.10.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)2215377404237938339Rat
1331767Hrtrt12Heart rate QTL 123.373heart pumping trait (VT:2000009)heart rate (CMO:0000002)2218414747240841241Rat
2293833Kiddil8Kidney dilation QTL 82.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2219753301247136170Rat
2293844Kiddil7Kidney dilation QTL 73.5kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2219753301247136170Rat
9587428Epfw6Epididymal fat weight QTL 67.470.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)2223389739249053267Rat
7411555Bw132Body weight QTL 1320.001body mass (VT:0001259)body weight gain (CMO:0000420)2223389739249053267Rat
631563Hcuc3Hepatic copper content QTL 33.87liver copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)2229059610249053267Rat

Markers in Region
D2Rat151  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22231,745,742 - 231,745,867 (+)MAPPERmRatBN7.2
Rnor_6.02248,688,805 - 248,688,929NCBIRnor6.0
Rnor_5.02267,219,065 - 267,219,189UniSTSRnor5.0
RGSC_v3.42240,855,846 - 240,855,971RGDRGSC3.4
RGSC_v3.42240,855,847 - 240,855,971UniSTSRGSC3.4
RGSC_v3.12240,842,586 - 240,842,711RGD
Celera2223,756,440 - 223,756,564UniSTS
FHH x ACI Map2112.8599RGD
FHH x ACI Map2112.8599UniSTS
Cytogenetic Map2q44UniSTS
RH140542  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22231,747,212 - 231,747,385 (+)MAPPERmRatBN7.2
Rnor_6.02248,690,275 - 248,690,447NCBIRnor6.0
Rnor_5.02267,220,535 - 267,220,707UniSTSRnor5.0
RGSC_v3.42240,857,317 - 240,857,489UniSTSRGSC3.4
Celera2223,757,910 - 223,758,082UniSTS
RH 3.4 Map21580.0UniSTS
Cytogenetic Map2q44UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 15 44 39 1 39 60 35 33
Low 1 28 13 2 18 2 8 11 14 8 11 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000067165   ⟹   ENSRNOP00000059667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2231,701,963 - 231,747,227 (+)Ensembl
Rnor_6.0 Ensembl2248,649,441 - 248,690,089 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000101068   ⟹   ENSRNOP00000083094
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2231,701,963 - 231,747,227 (+)Ensembl
RefSeq Acc Id: NM_001015037   ⟹   NP_001015037
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82234,362,356 - 234,407,646 (+)NCBI
mRatBN7.22231,701,934 - 231,747,227 (+)NCBI
Rnor_6.02248,644,473 - 248,690,289 (+)NCBI
Rnor_5.02267,169,695 - 267,220,549 (+)NCBI
Celera2223,713,699 - 223,757,924 (+)RGD
Sequence:
RefSeq Acc Id: XM_039102971   ⟹   XP_038958899
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82234,362,352 - 234,407,584 (+)NCBI
mRatBN7.22231,702,018 - 231,747,462 (+)NCBI
RefSeq Acc Id: XM_039102972   ⟹   XP_038958900
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82234,362,306 - 234,407,584 (+)NCBI
mRatBN7.22231,701,881 - 231,747,462 (+)NCBI
RefSeq Acc Id: XM_039102974   ⟹   XP_038958902
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82234,366,896 - 234,407,584 (+)NCBI
mRatBN7.22231,706,477 - 231,747,462 (+)NCBI
RefSeq Acc Id: XM_039102975   ⟹   XP_038958903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82234,366,918 - 234,407,584 (+)NCBI
mRatBN7.22231,706,477 - 231,747,462 (+)NCBI
RefSeq Acc Id: XM_039102976   ⟹   XP_038958904
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82234,379,321 - 234,407,584 (+)NCBI
mRatBN7.22231,718,932 - 231,747,462 (+)NCBI
RefSeq Acc Id: XM_039102977   ⟹   XP_038958905
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82234,362,327 - 234,407,584 (+)NCBI
mRatBN7.22231,701,905 - 231,747,462 (+)NCBI
RefSeq Acc Id: XM_063282417   ⟹   XP_063138487
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82234,362,374 - 234,407,584 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001015037   ⟸   NM_001015037
- UniProtKB: Q58FK9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000059667   ⟸   ENSRNOT00000067165
RefSeq Acc Id: XP_038958900   ⟸   XM_039102972
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038958905   ⟸   XM_039102977
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038958899   ⟸   XM_039102971
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZUT0 (UniProtKB/TrEMBL),   A6HW71 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038958902   ⟸   XM_039102974
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038958903   ⟸   XM_039102975
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038958904   ⟸   XM_039102976
- Peptide Label: isoform X3
RefSeq Acc Id: ENSRNOP00000083094   ⟸   ENSRNOT00000101068
RefSeq Acc Id: XP_063138487   ⟸   XM_063282417
- Peptide Label: isoform X2
Protein Domains
Aminotransferase class I/classII

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q58FK9-F1-model_v2 AlphaFold Q58FK9 1-454 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359262 AgrOrtholog
BioCyc Gene G2FUF-50985 BioCyc
Ensembl Genes ENSRNOG00000043426 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000067165.4 UniProtKB/TrEMBL
  ENSRNOT00000101068 ENTREZGENE
  ENSRNOT00000101068.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.640.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.1150.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Aminotransferase_I/II UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_dom1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_major UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:541589 UniProtKB/Swiss-Prot
NCBI Gene 541589 ENTREZGENE
PANTHER FI04487P UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR43807:SF6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Aminotran_1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Kyat3 PhenoGen
RatGTEx ENSRNOG00000043426 RatGTEx
Superfamily-SCOP SSF53383 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5ZUT0 ENTREZGENE, UniProtKB/TrEMBL
  A6HW71 ENTREZGENE, UniProtKB/TrEMBL
  F1M572_RAT UniProtKB/TrEMBL
  KAT3_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-04 Kyat3  kynurenine aminotransferase 3  Ccbl2  cysteine conjugate-beta lyase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-07-29 Ccbl2  cysteine conjugate-beta lyase 2  LOC100361841  kynurenine aminotransferase III-like  Data merged from RGD:2319336 737654 PROVISIONAL
2014-07-23 Ccbl2  cysteine conjugate-beta lyase 2  Kat3  kynurenine aminotransferase III  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 LOC100361841  kynurenine aminotransferase III-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-07-29 Kat3  kynurenine aminotransferase III      Symbol and Name status set to provisional 70820 PROVISIONAL