Gene: RGD1359108 (similar to RIKEN cDNA 3110043O21) Rattus norvegicus
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Symbol: RGD1359108
Name: similar to RIKEN cDNA 3110043O21
Description: ENCODES a protein that exhibits Rab GTPase binding (ortholog); Rab guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN autophagy (ortholog); axon extension (ortholog); endocytosis (ortholog); ASSOCIATED WITH Amyotrophic Lateral Sclerosis (ortholog); amyotrophic lateral sclerosis (ortholog); Arthritis, Juvenile (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome (ortholog); axonal growth cone (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: guanine nucleotide exchange C9orf72 homolog; hypothetical protein LOC313155; MGC93924; protein C9orf72 homolog; similar to RIKEN cDNA 3110043O21 gene; uncharacterized protein C9orf72 homolog
Orthologs:
Homo sapiens (human) : C9orf72 (chromosome 9 open reading frame 72)  HGNC  AGR
Mus musculus (house mouse) : 3110043O21Rik (RIKEN cDNA 3110043O21 gene)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : LOC102018919 (chromosome unknown open reading frame, human C9orf72)
Pan paniscus (bonobo/pygmy chimpanzee) : C9H9orf72 (chromosome 9 open reading frame, human C9orf72)
Canis lupus familiaris (dog) : C11H9orf72 (chromosome 11 C9orf72 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH9orf72 (chromosome unknown C9orf72 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0550,666,444 - 50,691,523 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0555,229,460 - 55,254,965 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4551,839,724 - 51,865,205 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1551,839,902 - 51,865,384 (-)NCBI
Celera548,510,000 - 48,535,299 (-)NCBICelera
Cytogenetic Map5q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on RGD1359108
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359108
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE