NLGN4Y (neuroligin 4 Y-linked) - Rat Genome Database

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Gene: NLGN4Y (neuroligin 4 Y-linked) Homo sapiens
Analyze
No known orthologs.
Symbol: NLGN4Y
Name: neuroligin 4 Y-linked
RGD ID: 1351370
HGNC Page HGNC:15529
Description: Enables scaffold protein binding activity. Involved in learning; social behavior; and vocalization behavior. Predicted to be located in asymmetric, glutamatergic, excitatory synapse; plasma membrane; and symmetric, GABA-ergic, inhibitory synapse. Predicted to be active in cell surface and synapse.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: alternative HNL4Y; HNL4Y; KIAA0951; neuroligin 4, Y linked; neuroligin 4, Y-linked; neuroligin Y; neuroligin-4, Y-linked
RGD Orthologs
Alliance Genes
More Info homologs ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38Y14,522,616 - 14,845,654 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblY14,522,573 - 14,845,654 (+)EnsemblGRCh38hg38GRCh38
GRCh37Y16,634,496 - 16,957,534 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36Y15,145,848 - 15,464,921 (+)NCBINCBI36Build 36hg18NCBI36
Build 34Y15,074,584 - 15,393,658NCBI
CeleraX3,620,431 - 3,941,794 (+)NCBICelera
Cytogenetic MapYq11.221NCBI
HuRefY11,242,845 - 11,560,873 (+)NCBIHuRef
T2T-CHM13v2.0Y15,429,244 - 15,752,217 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Autism  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10231032   PMID:10996085   PMID:12477932   PMID:12669065   PMID:12815422   PMID:15489334   PMID:16077734   PMID:17292328   PMID:18029348   PMID:18227507   PMID:18628683  
PMID:18923512   PMID:19605777   PMID:21838267   PMID:21873635   PMID:25558953   PMID:27626693   PMID:28514442   PMID:28611215   PMID:29229842   PMID:32243781   PMID:33961781  


Genomics

Variants

.
Variants in NLGN4Y
1 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 Yp11.2-q12(chrY:2786811-56885333)x2 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000050325]|Global developmental delay [RCV000050326]|Abnormality of the heart [RCV000050327]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000050325]|See cases [RCV000050325] ChrY:2786811..56885333 [GRCh38]
ChrY:2654852..59031480 [GRCh37]
ChrY:Yp11.2-q12		 pathogenic
GRCh38/hg38 Yp11.2-q11.223(chrY:2788370-20525326)x2 copy number gain See cases [RCV000050823] ChrY:2788370..20525326 [GRCh38]
ChrY:2656411..22687212 [GRCh37]
ChrY:2716411..21096600 [NCBI36]
ChrY:Yp11.2-q11.223		 pathogenic
GRCh38/hg38 Yp11.2-q11.223(chrY:2786811-22358529)x2 copy number gain See cases [RCV000050942] ChrY:2786811..22358529 [GRCh38]
ChrY:2654852..24504676 [GRCh37]
ChrY:2714852..22914064 [NCBI36]
ChrY:Yp11.2-q11.223		 pathogenic
GRCh37/hg19 Yq11.21-12(chrY:14698756-59031480)x0 copy number loss See cases [RCV000050825] ChrY:14698756..59031480 [GRCh37]
ChrY:13208776..57440868 [NCBI36]
ChrY:Yq11.21-12		 pathogenic
GRCh38/hg38 Yq11.221-12(chrY:13404515-57208726)x0 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051778]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051778]|See cases [RCV000051778] ChrY:13404515..57208726 [GRCh38]
ChrY:15516395..59354877 [GRCh37]
ChrY:Yq11.221-12		 pathogenic
GRCh38/hg38 Yq11.221-12(chrY:12586822-57208726)x0 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051768]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051768]|See cases [RCV000051768] ChrY:12586822..57208726 [GRCh38]
ChrY:14698756..59354877 [GRCh37]
ChrY:13208776..57764265 [NCBI36]
ChrY:Yq11.221-12		 pathogenic
GRCh38/hg38 Yp11.2-q11.23(chrY:2786811-26389995)x0 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051767]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051767]|See cases [RCV000051767] ChrY:2786811..26389995 [GRCh38]
ChrY:2654852..28536142 [GRCh37]
ChrY:2714852..26945530 [NCBI36]
ChrY:Yp11.2-q11.23		 pathogenic
GRCh37/hg19 Yp11.3-q12(chrY:2651665-59031480)x2 copy number gain See cases [RCV000052585] ChrY:2651665..59031480 [GRCh37]
ChrY:2711665..57440868 [NCBI36]
ChrY:Yp11.3-q12		 pathogenic
GRCh38/hg38 Yp11.2-q11.23(chrY:2786611-26409996)x2 copy number gain See cases [RCV000052586] ChrY:2786611..26409996 [GRCh38]
ChrY:2654652..28556143 [GRCh37]
ChrY:2714652..26965531 [NCBI36]
ChrY:Yp11.2-q11.23		 pathogenic
GRCh38/hg38 Yp11.2-q11.23(chrY:2786811-26463830)x2 copy number gain See cases [RCV000052587] ChrY:2786811..26463830 [GRCh38]
ChrY:2654852..28609977 [GRCh37]
ChrY:2714852..27019365 [NCBI36]
ChrY:Yp11.2-q11.23		 pathogenic
GRCh38/hg38 Yp11.2-q11.23(chrY:2786811-26483746)x2 copy number gain See cases [RCV000052588] ChrY:2786811..26483746 [GRCh38]
ChrY:2654852..28629893 [GRCh37]
ChrY:2714852..27039281 [NCBI36]
ChrY:Yp11.2-q11.23		 pathogenic
GRCh38/hg38 Yp11.2-q12(chrY:2783624-26637948)x2 copy number gain See cases [RCV000052551] ChrY:2783624..26637948 [GRCh38]
ChrY:2651665..28784095 [GRCh37]
ChrY:2711665..27193483 [NCBI36]
ChrY:Yp11.2-q12		 pathogenic
GRCh38/hg38 Yp11.2-q11.223(chrY:2787210-22302412)x2 copy number gain See cases [RCV000054342] ChrY:2787210..22302412 [GRCh38]
ChrY:2655251..24448559 [GRCh37]
ChrY:2715251..22857947 [NCBI36]
ChrY:Yp11.2-q11.223		 pathogenic
GRCh38/hg38 Yp11.2-q11.23(chrY:6478684-26574618)x2 copy number gain See cases [RCV000054344] ChrY:6478684..26574618 [GRCh38]
ChrY:6346725..28720765 [GRCh37]
ChrY:6406725..27130153 [NCBI36]
ChrY:Yp11.2-q11.23		 pathogenic
GRCh38/hg38 Yq11.221-11.222(chrY:12586822-18664380)x2 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054345]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054345]|See cases [RCV000054345] ChrY:12586822..18664380 [GRCh38]
ChrY:14698756..20826266 [GRCh37]
ChrY:13208776..19285654 [NCBI36]
ChrY:Yq11.221-11.222		 pathogenic
NM_014893.4(NLGN4Y):c.2020G>A (p.Glu674Lys) single nucleotide variant Malignant melanoma [RCV000073274] ChrY:14840831 [GRCh38]
ChrY:16952711 [GRCh37]
ChrY:15462105 [NCBI36]
ChrY:Yq11.221		 not provided
GRCh38/hg38 Yq11.221-12(chrY:14076802-57165209)x0 copy number loss See cases [RCV000133870] ChrY:14076802..57165209 [GRCh38]
ChrY:16188682..59311360 [GRCh37]
ChrY:14698076..57720748 [NCBI36]
ChrY:Yq11.221-12		 pathogenic
GRCh38/hg38 Yq11.221-12(chrY:13404515-57208726)x0 copy number loss See cases [RCV000051778] ChrY:13404515..57208726 [GRCh38]
ChrY:15516395..59354877 [GRCh37]
ChrY:14025789..57764265 [NCBI36]
ChrY:Yq11.221-12		 pathogenic
GRCh37/hg19 Yp11.31-q12(chrY:2654852-59031480)x0 copy number loss See cases [RCV000133673] ChrY:2654852..59031480 [GRCh37]
ChrY:2714852..57440868 [NCBI36]
ChrY:Yp11.31-q12		 pathogenic
GRCh37/hg19 Yp11.31-q12(chrY:2654852-59031480)x3 copy number gain See cases [RCV000133672] ChrY:2654852..59031480 [GRCh37]
ChrY:2714852..57440868 [NCBI36]
ChrY:Yp11.31-q12		 pathogenic
GRCh38/hg38 Yp11.2-q11.222(chrY:6255441-18435984)x2 copy number gain See cases [RCV000134034] ChrY:6255441..18435984 [GRCh38]
ChrY:6123482..20597870 [GRCh37]
ChrY:6183482..19057258 [NCBI36]
ChrY:Yp11.2-q11.222		 pathogenic
GRCh38/hg38 Yq11.221-12(chrY:12965721-57212647)x0 copy number loss See cases [RCV000135325] ChrY:12965721..57212647 [GRCh38]
ChrY:15077631..59358798 [GRCh37]
ChrY:13587025..57768186 [NCBI36]
ChrY:Yq11.221-12		 pathogenic
GRCh38/hg38 Yp11.2-q11.23(chrY:6270281-26463761)x0 copy number loss See cases [RCV000134844] ChrY:6270281..26463761 [GRCh38]
ChrY:6138322..28609908 [GRCh37]
ChrY:6198322..27019296 [NCBI36]
ChrY:Yp11.2-q11.23		 pathogenic
GRCh37/hg19 Yq11.221-12(chrY:16183453-59011762)x2 copy number gain See cases [RCV000135766] ChrY:16183453..59011762 [GRCh37]
ChrY:14692847..57421150 [NCBI36]
ChrY:Yq11.221-12		 pathogenic
GRCh38/hg38 Yp11.32-q12(chrY:10701-57189762) copy number loss See cases [RCV000135689] ChrY:10701..57189762 [GRCh38]
ChrY:10701..59335913 [GRCh37]
ChrY:701..57745301 [NCBI36]
ChrY:Yp11.32-q12		 pathogenic
GRCh38/hg38 Yp11.32-q12(chrY:10701-57189762)x0 copy number loss See cases [RCV000135690] ChrY:10701..57189762 [GRCh38]
ChrY:10701..59335913 [GRCh37]
ChrY:701..57745301 [NCBI36]
ChrY:Yp11.32-q12		 pathogenic
GRCh38/hg38 Yq11.221-12(chrY:13948013-57208726)x0 copy number loss See cases [RCV000135529] ChrY:13948013..57208726 [GRCh38]
ChrY:16059893..59354877 [GRCh37]
ChrY:14569287..57764265 [NCBI36]
ChrY:Yq11.221-12		 pathogenic
GRCh38/hg38 Yp11.2-q11.23(chrY:2786596-26575961)x0 copy number loss See cases [RCV000136110] ChrY:2786596..26575961 [GRCh38]
ChrY:2654637..28722108 [GRCh37]
ChrY:2714637..27131496 [NCBI36]
ChrY:Yp11.2-q11.23		 pathogenic
GRCh38/hg38 Yq11.221-11.223(chrY:13908860-22358529)x1 copy number gain See cases [RCV000136525] ChrY:13908860..22358529 [GRCh38]
ChrY:16020740..24504676 [GRCh37]
ChrY:14530134..22914064 [NCBI36]
ChrY:Yq11.221-11.223		 pathogenic
GRCh38/hg38 Yp11.2-q11.23(chrY:2855704-24288951)x2 copy number gain See cases [RCV000136851] ChrY:2855704..24288951 [GRCh38]
ChrY:2723745..26435098 [GRCh37]
ChrY:2783745..24844486 [NCBI36]
ChrY:Yp11.2-q11.23		 pathogenic
GRCh38/hg38 Yp11.32-q11.222(chrY:10701-17951506)x0 copy number loss See cases [RCV000137555] ChrY:10701..17951506 [GRCh38]
ChrY:10701..20063386 [GRCh37]
ChrY:701..18572780 [NCBI36]
ChrY:Yp11.32-q11.222		 pathogenic
GRCh38/hg38 Yq11.221(chrY:14775606-15303706)x2 copy number gain See cases [RCV000137365] ChrY:14775606..15303706 [GRCh38]
ChrY:16887486..17415586 [GRCh37]
ChrY:15396880..15924980 [NCBI36]
ChrY:Yq11.221		 likely benign
GRCh38/hg38 Yq11.221(chrY:14587338-15252208)x2 copy number gain See cases [RCV000138194] ChrY:14587338..15252208 [GRCh38]
ChrY:16699218..17364088 [GRCh37]
ChrY:15208612..15873482 [NCBI36]
ChrY:Yq11.221		 likely benign
GRCh38/hg38 Yq11.221-12(chrY:14062885-57189762)x0 copy number loss See cases [RCV000138875] ChrY:14062885..57189762 [GRCh38]
ChrY:16174765..59335913 [GRCh37]
ChrY:14684159..57745301 [NCBI36]
ChrY:Yq11.221-12		 pathogenic
GRCh37/hg19 Yp11.31-q12(chrY:2650559-59032389)x2 copy number gain See cases [RCV000138422] ChrY:2650559..59032389 [GRCh37]
ChrY:2710559..57441777 [NCBI36]
ChrY:Yp11.31-q12		 pathogenic
GRCh38/hg38 Yp11.2-q12(chrY:2133003-56884424)x0 copy number loss See cases [RCV000139324] ChrY:2133003..56884424 [GRCh38]
ChrY:1167123..59030571 [GRCh37]
ChrY:1137123..57439959 [NCBI36]
ChrY:Yp11.2-q12		 pathogenic
GRCh38/hg38 Yp11.31-q12(chrY:378139-57181562)x1 copy number loss See cases [RCV000141411] ChrY:378139..57181562 [GRCh38]
ChrY:288874..59327713 [GRCh37]
ChrY:258874..57737101 [NCBI36]
ChrY:Yp11.31-q12		 pathogenic
GRCh38/hg38 Yp11.2-q11.222(chrY:2782272-17454794)x2 copy number gain See cases [RCV000140647] ChrY:2782272..17454794 [GRCh38]
ChrY:2650313..19566674 [GRCh37]
ChrY:2710313..18076068 [NCBI36]
ChrY:Yp11.2-q11.222		 pathogenic
GRCh38/hg38 Yq11.21-12(chrY:10624004-57190586)x0 copy number loss See cases [RCV000141809] ChrY:10624004..57190586 [GRCh38]
ChrY:13134518..59336737 [GRCh37]
ChrY:11244518..57746125 [NCBI36]
ChrY:Yq11.21-12		 pathogenic
GRCh38/hg38 Yq11.221-12(chrY:12881571-26653790)x1 copy number gain See cases [RCV000142059] ChrY:12881571..26653790 [GRCh38]
ChrY:14993486..28799937 [GRCh37]
ChrY:13502880..27209325 [NCBI36]
ChrY:Yq11.221-12		 likely benign
GRCh38/hg38 Yq11.221-12(chrY:12702930-26653790)x1 copy number gain See cases [RCV000142197] ChrY:12702930..26653790 [GRCh38]
ChrY:14814859..28799937 [GRCh37]
ChrY:13324253..27209325 [NCBI36]
ChrY:Yq11.221-12		 pathogenic
GRCh38/hg38 Yq11.21-12(chrY:11680193-26653790)x4 copy number gain See cases [RCV000143421] ChrY:11680193..26653790 [GRCh38]
ChrY:13800899..28799937 [GRCh37]
ChrY:12310899..27209325 [NCBI36]
ChrY:Yq11.21-12		 likely pathogenic
GRCh37/hg19 Yp11.31-q12(chrY:2654852-59031480)x2 copy number gain See cases [RCV000148271] ChrY:2654852..59031480 [GRCh37]
ChrY:2714852..57440868 [NCBI36]
ChrY:Yp11.31-q12		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:20297-59358845)x2 copy number gain See cases [RCV000240246] ChrY:20297..59358845 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:10701-59349277)x1 copy number loss See cases [RCV000240213] ChrY:10701..59349277 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:100002-59353228)x2 copy number gain See cases [RCV000239812] ChrY:100002..59353228 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:21267-59349649)x2 copy number gain See cases [RCV000239787] ChrY:21267..59349649 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:21267-59337042)x2 copy number gain See cases [RCV000239958] ChrY:21267..59337042 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yq11.221-12(chrY:16188682-59349649)x0 copy number loss See cases [RCV000240102] ChrY:16188682..59349649 [GRCh37]
ChrY:Yq11.221-12		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:126426-59349649)x2 copy number gain See cases [RCV000240301] ChrY:126426..59349649 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:126426-59353228)x2 copy number gain See cases [RCV000240305] ChrY:126426..59353228 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yq11.221-12(chrY:15415024-59349591)x0 copy number loss See cases [RCV000446382] ChrY:15415024..59349591 [GRCh37]
ChrY:Yq11.221-12		 pathogenic
NM_001365588.1(NLGN4Y):c.1263C>A (p.Asn421Lys) single nucleotide variant not provided [RCV000443711] ChrY:14830121 [GRCh38]
ChrY:16942001 [GRCh37]
ChrY:Yq11.221		 uncertain significance
GRCh37/hg19 Yp11.32-q12(chrY:20297-59356174) copy number loss See cases [RCV000448395] ChrY:20297..59356174 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:1684070-36905226)x3 copy number gain See cases [RCV000510438] ChrY:1684070..36905226 [GRCh37]
ChrY:Yp11.32-q12		 uncertain significance
GRCh37/hg19 Yq11.21-12(chrY:13871147-59336737)x0 copy number loss See cases [RCV000510252] ChrY:13871147..59336737 [GRCh37]
ChrY:Yq11.21-12		 pathogenic
GRCh37/hg19 Yp11.31-q11.23(chrY:2650141-28799937)x2 copy number gain See cases [RCV000510700] ChrY:2650141..28799937 [GRCh37]
ChrY:Yp11.31-q11.23		 uncertain significance
GRCh37/hg19 Yq11.21-11.221(chrY:14844481-16824498)x0 copy number loss See cases [RCV000510338] ChrY:14844481..16824498 [GRCh37]
ChrY:Yq11.21-11.221		 pathogenic
GRCh37/hg19 Yp11.31-q11.23(chrY:2650141-28799937)x0 copy number loss See cases [RCV000511418] ChrY:2650141..28799937 [GRCh37]
ChrY:Yp11.31-q11.23		 pathogenic
GRCh37/hg19 Yp11.32-q11.23(chrY:168546-28451874)x1 copy number loss See cases [RCV000511281] ChrY:168546..28451874 [GRCh37]
ChrY:Yp11.32-q11.23		 pathogenic
NM_001365588.1(NLGN4Y):c.260G>A (p.Arg87Gln) single nucleotide variant not provided [RCV000677289] ChrY:14622379 [GRCh38]
ChrY:16734259 [GRCh37]
ChrY:Yq11.221		 uncertain significance
GRCh37/hg19 Yp11.31-q11.223(chrY:2650140-24070172)x2 copy number gain not provided [RCV000684444] ChrY:2650140..24070172 [GRCh37]
ChrY:Yp11.31-q11.223		 pathogenic
GRCh37/hg19 Yq11.21-12(chrY:13410538-59032808)x0 copy number loss not provided [RCV000684445] ChrY:13410538..59032808 [GRCh37]
ChrY:Yq11.21-12		 pathogenic
Single allele duplication Autism [RCV000754378] ChrY:1..57227415 [GRCh38]
ChrY:Yp11.32-q12		 likely pathogenic
GRCh37/hg19 Yp11.31-q11.23(chrY:2655180-28727063)x0 copy number gain not provided [RCV000753972] ChrY:2655180..28727063 [GRCh37]
ChrY:Yp11.31-q11.23		 pathogenic
GRCh37/hg19 Yp11.31-q12(chrY:2655180-58883690)x2 copy number gain not provided [RCV000753973] ChrY:2655180..58883690 [GRCh37]
ChrY:Yp11.31-q12		 pathogenic
GRCh37/hg19 Yq11.1-12(chrY:13132024-28817458)x0 copy number loss not provided [RCV000754010] ChrY:13132024..28817458 [GRCh37]
ChrY:Yq11.1-12		 pathogenic
NM_001365588.1(NLGN4Y):c.2034C>T (p.Pro678=) single nucleotide variant not provided [RCV000949454] ChrY:14840785 [GRCh38]
ChrY:16952665 [GRCh37]
ChrY:Yq11.221		 likely benign
GRCh37/hg19 Yp11.31-q11.223(chrY:2650278-24445033) copy number gain not provided [RCV000767654] ChrY:2650278..24445033 [GRCh37]
ChrY:Yp11.31-q11.223		 pathogenic
GRCh37/hg19 Yp11.32-q11.221(chrY:1640371-19565713) copy number gain not provided [RCV000767656] ChrY:1640371..19565713 [GRCh37]
ChrY:Yp11.32-q11.221		 pathogenic
GRCh37/hg19 Yp11.32-q11.221(chrY:588444-19565713) copy number gain not provided [RCV000767655] ChrY:588444..19565713 [GRCh37]
ChrY:Yp11.32-q11.221		 pathogenic
GRCh37/hg19 Yq11.221-12(chrY:15190336-59343488)x0 copy number loss not provided [RCV000847612] ChrY:15190336..59343488 [GRCh37]
ChrY:Yq11.221-12		 pathogenic
GRCh37/hg19 Yq11.221(chrY:16099875-16702276)x2 copy number gain not provided [RCV000847011] ChrY:16099875..16702276 [GRCh37]
ChrY:Yq11.221		 uncertain significance
GRCh37/hg19 Yq11.221-11.23(chrY:15427283-28799937)x0 copy number loss Male infertility [RCV001090085] ChrY:15427283..28799937 [GRCh37]
ChrY:Yq11.221-11.23		 pathogenic
GRCh37/hg19 Yp11.32-q11.222(chrY:118546-20603124)x2 copy number gain not provided [RCV000845980] ChrY:118546..20603124 [GRCh37]
ChrY:Yp11.32-q11.222		 pathogenic
GRCh37/hg19 Yp11.31-q11.222(chrY:2650140-20619847)x2 copy number gain not provided [RCV000847005] ChrY:2650140..20619847 [GRCh37]
ChrY:Yp11.31-q11.222		 pathogenic
GRCh37/hg19 Yq11.221(chrY:16230512-16646954)x2 copy number gain not provided [RCV000847921] ChrY:16230512..16646954 [GRCh37]
ChrY:Yq11.221		 uncertain significance
GRCh37/hg19 Yq11.221-12(chrY:16053146-59343488)x2 copy number gain not provided [RCV000848067] ChrY:16053146..59343488 [GRCh37]
ChrY:Yq11.221-12		 pathogenic
GRCh37/hg19 Yq11.21-11.23(chrY:13800703-28799937)x0 copy number loss Male infertility [RCV001090084] ChrY:13800703..28799937 [GRCh37]
ChrY:Yq11.21-11.23		 pathogenic
NM_001365588.1(NLGN4Y):c.699C>T (p.Thr233=) single nucleotide variant not provided [RCV000957773] ChrY:14824201 [GRCh38]
ChrY:16936081 [GRCh37]
ChrY:Yq11.221		 benign
GRCh37/hg19 Yp11.32-q11.23(chrY:168546-28799937)x2 copy number gain not provided [RCV001007377] ChrY:168546..28799937 [GRCh37]
ChrY:Yp11.32-q11.23		 pathogenic
GRCh37/hg19 Yq11.221(chrY:16554396-16878467)x2 copy number gain not provided [RCV001007393] ChrY:16554396..16878467 [GRCh37]
ChrY:Yq11.221		 uncertain significance
GRCh37/hg19 Yq11.21-11.223(chrY:14495040-24070172)x0 copy number loss Male infertility [RCV001090078] ChrY:14495040..24070172 [GRCh37]
ChrY:Yq11.21-11.223		 pathogenic
GRCh37/hg19 Yp11.32-q12(chrY:1-59373566) copy number gain Global developmental delay [RCV002280747] ChrY:1..59373566 [GRCh37]
ChrY:Yp11.32-q12		 pathogenic
GRCh37/hg19 Yp11.31-q11.23(chrY:2650424-28799654) copy number loss not provided [RCV002221453] ChrY:2650424..28799654 [GRCh37]
ChrY:Yp11.31-q11.23		 pathogenic
GRCh37/hg19 Yq11.21-11.23(chrY:13905421-28799654) copy number loss not provided [RCV002221454] ChrY:13905421..28799654 [GRCh37]
ChrY:Yq11.21-11.23		 pathogenic
GRCh37/hg19 Yq11.221-12(chrY:16203971-59336737)x0 copy number loss not provided [RCV002474928] ChrY:16203971..59336737 [GRCh37]
ChrY:Yq11.221-12		 uncertain significance
GRCh37/hg19 Yq11.21-12(chrY:14370813-59373566)x0 copy number loss not provided [RCV002473934] ChrY:14370813..59373566 [GRCh37]
ChrY:Yq11.21-12		 pathogenic
GRCh37/hg19 Yq11.221(chrY:16877505-17348784)x4 copy number gain not provided [RCV002475612] ChrY:16877505..17348784 [GRCh37]
ChrY:Yq11.221		 uncertain significance
GRCh38/hg38 Yq11.221-11.222(chrY:17454742-17459891) copy number gain Azoospermia [RCV003335987] ChrY:17454742..17459891 [GRCh38]
ChrY:Yq11.221-11.222		 uncertain significance
NM_001365588.1(NLGN4Y):c.1011T>C (p.Cys337=) single nucleotide variant not provided [RCV003436920] ChrY:14829869 [GRCh38]
ChrY:16941749 [GRCh37]
ChrY:Yq11.221		 likely benign
NM_001365588.1(NLGN4Y):c.2136C>T (p.Ala712=) single nucleotide variant not provided [RCV003436921] ChrY:14840887 [GRCh38]
ChrY:16952767 [GRCh37]
ChrY:Yq11.221		 likely benign
NM_001365588.1(NLGN4Y):c.1672C>T (p.Gln558Ter) single nucleotide variant not provided [RCV003488149] ChrY:14840423 [GRCh38]
ChrY:16952303 [GRCh37]
ChrY:Yq11.221		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:7531
Count of miRNA genes:1330
Interacting mature miRNAs:1681
Transcripts:ENST00000297967, ENST00000339174, ENST00000355905, ENST00000382868, ENST00000382872, ENST00000413217, ENST00000471252, ENST00000476359, ENST00000481089
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH48712  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,955,664 - 16,955,744UniSTSGRCh37
CeleraX3,941,610 - 3,941,690RGD
Cytogenetic MapYq11.221UniSTS
HuRefY11,560,689 - 11,560,769UniSTS
RH15923  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,955,390 - 16,955,512UniSTSGRCh37
GRCh37X5,808,415 - 5,808,540UniSTSGRCh37
Build 36X5,818,415 - 5,818,540RGDNCBI36
CeleraX3,941,336 - 3,941,458UniSTS
CeleraX10,033,272 - 10,033,397RGD
Cytogenetic MapYq11.221UniSTS
Cytogenetic MapXp22.33UniSTS
HuRefX3,686,646 - 3,686,771UniSTS
HuRefY11,560,415 - 11,560,537UniSTS
G43607  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,955,286 - 16,955,513UniSTSGRCh37
GRCh37X5,808,414 - 5,808,645UniSTSGRCh37
Build 36X5,818,414 - 5,818,645RGDNCBI36
CeleraX3,941,232 - 3,941,459UniSTS
CeleraX10,033,271 - 10,033,502RGD
Cytogenetic MapYq11.221UniSTS
Cytogenetic MapXp22.33UniSTS
HuRefX3,686,645 - 3,686,876UniSTS
HuRefY11,560,311 - 11,560,538UniSTS
sY1239  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,634,478 - 16,634,943UniSTSGRCh37
CeleraX3,620,421 - 3,620,886RGD
HuRefY11,242,835 - 11,243,300UniSTS
DXYS125  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,895,778 - 16,895,915UniSTSGRCh37
GRCh37X5,865,540 - 5,865,677UniSTSGRCh37
Build 36X5,875,540 - 5,875,677RGDNCBI36
CeleraX3,881,723 - 3,881,860UniSTS
CeleraX10,090,395 - 10,090,532RGD
Cytogenetic MapYq11.221UniSTS
Cytogenetic MapXp22.33UniSTS
HuRefX3,743,087 - 3,743,224UniSTS
HuRefY11,501,180 - 11,501,317UniSTS
DXYS100  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,944,727 - 16,944,944UniSTSGRCh37
CeleraX3,930,672 - 3,930,889RGD
Cytogenetic MapYq11.221UniSTS
HuRefY11,549,621 - 11,549,838UniSTS
G66230  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,788,171 - 16,788,271UniSTSGRCh37
CeleraX3,774,116 - 3,774,216RGD
Cytogenetic MapYq11.221UniSTS
HuRefY11,393,888 - 11,393,988UniSTS
G66233  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,793,837 - 16,793,971UniSTSGRCh37
GRCh37X5,996,260 - 5,996,394UniSTSGRCh37
Build 36X6,006,260 - 6,006,394RGDNCBI36
CeleraX10,221,456 - 10,221,590RGD
CeleraX3,779,782 - 3,779,916UniSTS
Cytogenetic MapYq11.221UniSTS
Cytogenetic MapXp22.33UniSTS
HuRefY11,399,803 - 11,399,937UniSTS
G66236  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,818,004 - 16,818,079UniSTSGRCh37
CeleraX3,803,949 - 3,804,024RGD
Cytogenetic MapYq11.221UniSTS
HuRefY11,423,710 - 11,423,785UniSTS
G66241  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,796,170 - 16,796,269UniSTSGRCh37
CeleraX3,782,115 - 3,782,214RGD
Cytogenetic MapYq11.221UniSTS
HuRefY11,402,136 - 11,402,235UniSTS
G66393  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,797,988 - 16,798,067UniSTSGRCh37
CeleraX3,783,933 - 3,784,012RGD
Cytogenetic MapYq11.221UniSTS
HuRefY11,403,254 - 11,403,333UniSTS
G66396  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X5,992,303 - 5,992,401UniSTSGRCh37
GRCh37Y16,797,802 - 16,797,900UniSTSGRCh37
Build 36X6,002,303 - 6,002,401RGDNCBI36
CeleraX3,783,747 - 3,783,845UniSTS
CeleraX10,217,499 - 10,217,597RGD
Cytogenetic MapYq11.221UniSTS
Cytogenetic MapXp22.33UniSTS
HuRefX3,871,879 - 3,871,977UniSTS
G66005  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X45,535,637 - 45,535,763UniSTSGRCh37
GRCh37Y16,664,075 - 16,664,202UniSTSGRCh37
Build 36X45,420,581 - 45,420,707RGDNCBI36
CeleraX3,650,018 - 3,650,145RGD
CeleraX49,727,801 - 49,727,928UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic MapYq11.221UniSTS
HuRefX43,251,688 - 43,251,815UniSTS
HuRefY11,272,339 - 11,272,466UniSTS
G66008  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,891,933 - 16,892,135UniSTSGRCh37
CeleraX3,877,878 - 3,878,080RGD
Cytogenetic MapYq11.221UniSTS
HuRefY11,497,335 - 11,497,537UniSTS
G66009  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,779,106 - 16,779,350UniSTSGRCh37
CeleraX3,765,051 - 3,765,295RGD
Cytogenetic MapYq11.221UniSTS
HuRefY11,384,956 - 11,385,200UniSTS
NLGN4Y-5-1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,941,347 - 16,942,129UniSTSGRCh37
CeleraX3,927,292 - 3,928,074UniSTS
HuRefY11,546,241 - 11,547,023UniSTS
NLGN4Y-2  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,831,187 - 16,831,668UniSTSGRCh37
CeleraX3,817,132 - 3,817,613UniSTS
HuRefY11,436,756 - 11,437,237UniSTS
NLGN4Y-3  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,834,649 - 16,835,332UniSTSGRCh37
CeleraX3,820,594 - 3,821,277UniSTS
HuRefY11,439,830 - 11,440,513UniSTS
NLGN4Y-4  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,935,939 - 16,936,400UniSTSGRCh37
CeleraX3,921,884 - 3,922,345UniSTS
NLGN4Y-5-2  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,941,948 - 16,942,696UniSTSGRCh37
CeleraX3,927,893 - 3,928,641UniSTS
HuRefY11,546,842 - 11,547,590UniSTS
NLGN4Y-6  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,952,621 - 16,953,418UniSTSGRCh37
CeleraX3,938,566 - 3,939,363UniSTS
Cytogenetic MapYq11.221UniSTS
HuRefY11,557,646 - 11,558,443UniSTS
sY1773  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,819,257 - 16,819,714UniSTSGRCh37
CeleraX3,805,202 - 3,805,659UniSTS
HuRefY11,424,963 - 11,425,420UniSTS
sY3181  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710120,987,704 - 120,988,716UniSTSGRCh37
GRCh37Y16,789,464 - 16,789,774UniSTSGRCh37
Celera10114,717,305 - 114,718,316UniSTS
CeleraX3,775,409 - 3,775,719UniSTS
HuRefY11,395,181 - 11,395,491UniSTS
sY3182  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,799,382 - 16,799,780UniSTSGRCh37
CeleraX3,785,327 - 3,785,725UniSTS
HuRefY11,404,648 - 11,405,046UniSTS
sY3183  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,809,519 - 16,809,774UniSTSGRCh37
CeleraX3,795,464 - 3,795,719UniSTS
HuRefY11,414,921 - 11,415,176UniSTS
sY3192  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,793,202 - 16,793,694UniSTSGRCh37
CeleraX3,779,147 - 3,779,639UniSTS
HuRefY11,399,168 - 11,399,660UniSTS
sY3193  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,795,419 - 16,795,726UniSTSGRCh37
CeleraX3,781,364 - 3,781,671UniSTS
HuRefY11,401,385 - 11,401,692UniSTS
sY3194  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,797,365 - 16,797,639UniSTSGRCh37
CeleraX3,783,310 - 3,783,584UniSTS
sY3203  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,790,267 - 16,790,542UniSTSGRCh37
CeleraX3,776,212 - 3,776,487UniSTS
sY3204  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,791,075 - 16,791,457UniSTSGRCh37
CeleraX3,777,020 - 3,777,402UniSTS
sY3205  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,791,922 - 16,792,143UniSTSGRCh37
GRCh37X5,998,078 - 5,998,314UniSTSGRCh37
CeleraX3,777,867 - 3,778,088UniSTS
CeleraX10,223,274 - 10,223,510UniSTS
HuRefX3,877,531 - 3,877,767UniSTS
HuRefY11,397,889 - 11,398,110UniSTS
sY3206  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y16,792,719 - 16,793,002UniSTSGRCh37
CeleraX3,778,664 - 3,778,947UniSTS
HuRefY11,398,686 - 11,398,969UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2 3 2 15 2 56 4 55 12 15 15
Low 1277 1028 999 305 390 189 2263 657 2573 200 414 917 121 797 1366 2
Below cutoff 649 1270 318 167 695 147 1175 1124 646 76 550 251 20 219 930 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_028212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001164238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001206850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001365584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001365586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001365588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001365590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001365591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001365592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001365593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_014893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_028319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_046355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006724874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011531427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011531428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011531429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011531430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017030036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017030039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017030040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017030041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047442719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047442720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047442721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047442722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054328269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA558153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB023168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC011903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF376804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX358049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX773941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX773943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC113525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC113551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF222878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM722570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX537428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP086569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC360504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000339174   ⟹   ENSP00000342535
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,524,574 - 14,843,647 (+)Ensembl
RefSeq Acc Id: ENST00000355905   ⟹   ENSP00000348169
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,523,746 - 14,843,726 (+)Ensembl
RefSeq Acc Id: ENST00000382868   ⟹   ENSP00000372320
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,523,746 - 14,843,726 (+)Ensembl
RefSeq Acc Id: ENST00000382872   ⟹   ENSP00000372325
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,522,752 - 14,845,650 (+)Ensembl
RefSeq Acc Id: ENST00000413217   ⟹   ENSP00000412638
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,622,181 - 14,733,549 (+)Ensembl
RefSeq Acc Id: ENST00000471252
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,522,638 - 14,622,497 (+)Ensembl
RefSeq Acc Id: ENST00000476359
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,523,746 - 14,843,726 (+)Ensembl
RefSeq Acc Id: ENST00000481089
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,524,529 - 14,622,368 (+)Ensembl
RefSeq Acc Id: ENST00000643089   ⟹   ENSP00000496594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,522,573 - 14,845,639 (+)Ensembl
RefSeq Acc Id: ENST00000645399   ⟹   ENSP00000494046
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,523,967 - 14,622,220 (+)Ensembl
RefSeq Acc Id: ENST00000684976   ⟹   ENSP00000510011
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY14,524,529 - 14,845,654 (+)Ensembl
RefSeq Acc Id: NM_001164238   ⟹   NP_001157710
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,622,021 - 14,733,549 (+)NCBI
GRCh37Y16,634,488 - 16,955,848 (+)RGD
CeleraY3,620,431 - 3,941,794 (+)RGD
HuRefY11,242,845 - 11,560,873 (+)RGD
T2T-CHM13v2.0Y15,528,665 - 15,640,185 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001206850   ⟹   NP_001193779
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,522,616 - 14,845,654 (+)NCBI
GRCh37Y16,634,488 - 16,955,848 (+)ENTREZGENE
HuRefY11,242,845 - 11,560,873 (+)RGD
T2T-CHM13v2.0Y15,429,244 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001365584   ⟹   NP_001352513
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001365586   ⟹   NP_001352515
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,522,616 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,429,244 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001365588   ⟹   NP_001352517
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001365590   ⟹   NP_001352519
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001365591   ⟹   NP_001352520
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,522,616 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,429,244 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001365592   ⟹   NP_001352521
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001365593   ⟹   NP_001352522
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394830   ⟹   NP_001381759
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,522,616 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,429,244 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394831   ⟹   NP_001381760
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: NM_014893   ⟹   NP_055708
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,523,746 - 14,845,654 (+)NCBI
GRCh37Y16,634,488 - 16,955,848 (+)RGD
Build 36Y15,145,848 - 15,464,921 (+)NCBI Archive
CeleraY3,620,431 - 3,941,794 (+)RGD
HuRefY11,242,845 - 11,560,873 (+)RGD
T2T-CHM13v2.0Y15,430,374 - 15,752,217 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006724874   ⟹   XP_006724937
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,523,972 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011531427   ⟹   XP_011529729
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,582,588 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011531428   ⟹   XP_011529730
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011531429   ⟹   XP_011529731
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,587,609 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011531430   ⟹   XP_011529732
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017030036   ⟹   XP_016885525
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,582,588 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017030039   ⟹   XP_016885528
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,622,009 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017030040   ⟹   XP_016885529
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,704,787 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017030041   ⟹   XP_016885530
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,733,549 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024452490   ⟹   XP_024308258
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,553,734 - 14,845,654 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047442719   ⟹   XP_047298675
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,845,654 (+)NCBI
RefSeq Acc Id: XM_047442720   ⟹   XP_047298676
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,523,972 - 14,845,654 (+)NCBI
RefSeq Acc Id: XM_047442721   ⟹   XP_047298677
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,524,529 - 14,733,549 (+)NCBI
RefSeq Acc Id: XM_047442722   ⟹   XP_047298678
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38Y14,522,616 - 14,733,549 (+)NCBI
RefSeq Acc Id: XM_054328256   ⟹   XP_054184231
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,489,233 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328257   ⟹   XP_054184232
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328258   ⟹   XP_054184233
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,494,254 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328259   ⟹   XP_054184234
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,460,367 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328260   ⟹   XP_054184235
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,430,600 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328261   ⟹   XP_054184236
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328262   ⟹   XP_054184237
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,489,233 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328263   ⟹   XP_054184238
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,431,157 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328264   ⟹   XP_054184239
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,430,600 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328265   ⟹   XP_054184240
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,528,653 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328266   ⟹   XP_054184241
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,611,440 - 15,752,217 (+)NCBI
RefSeq Acc Id: XM_054328267   ⟹   XP_054184242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,431,157 - 15,640,185 (+)NCBI
RefSeq Acc Id: XM_054328268   ⟹   XP_054184243
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,431,157 - 15,640,185 (+)NCBI
RefSeq Acc Id: XM_054328269   ⟹   XP_054184244
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0Y15,429,244 - 15,640,185 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001157710 (Get FASTA)   NCBI Sequence Viewer  
  NP_001193779 (Get FASTA)   NCBI Sequence Viewer  
  NP_001352513 (Get FASTA)   NCBI Sequence Viewer  
  NP_001352515 (Get FASTA)   NCBI Sequence Viewer  
  NP_001352517 (Get FASTA)   NCBI Sequence Viewer  
  NP_001352519 (Get FASTA)   NCBI Sequence Viewer  
  NP_001352520 (Get FASTA)   NCBI Sequence Viewer  
  NP_001352521 (Get FASTA)   NCBI Sequence Viewer  
  NP_001352522 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381759 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381760 (Get FASTA)   NCBI Sequence Viewer  
  NP_055708 (Get FASTA)   NCBI Sequence Viewer  
  XP_006724937 (Get FASTA)   NCBI Sequence Viewer  
  XP_011529729 (Get FASTA)   NCBI Sequence Viewer  
  XP_011529730 (Get FASTA)   NCBI Sequence Viewer  
  XP_011529731 (Get FASTA)   NCBI Sequence Viewer  
  XP_011529732 (Get FASTA)   NCBI Sequence Viewer  
  XP_016885525 (Get FASTA)   NCBI Sequence Viewer  
  XP_016885528 (Get FASTA)   NCBI Sequence Viewer  
  XP_016885529 (Get FASTA)   NCBI Sequence Viewer  
  XP_016885530 (Get FASTA)   NCBI Sequence Viewer  
  XP_024308258 (Get FASTA)   NCBI Sequence Viewer  
  XP_047298675 (Get FASTA)   NCBI Sequence Viewer  
  XP_047298676 (Get FASTA)   NCBI Sequence Viewer  
  XP_047298677 (Get FASTA)   NCBI Sequence Viewer  
  XP_047298678 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184231 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184232 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184233 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184234 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184235 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184236 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184237 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184238 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184239 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184240 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184241 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184242 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184243 (Get FASTA)   NCBI Sequence Viewer  
  XP_054184244 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH32567 (Get FASTA)   NCBI Sequence Viewer  
  AAI13526 (Get FASTA)   NCBI Sequence Viewer  
  AAI13552 (Get FASTA)   NCBI Sequence Viewer  
  AAM46113 (Get FASTA)   NCBI Sequence Viewer  
  BAA76795 (Get FASTA)   NCBI Sequence Viewer  
  BAG58145 (Get FASTA)   NCBI Sequence Viewer  
  CAD23295 (Get FASTA)   NCBI Sequence Viewer  
  CAD97670 (Get FASTA)   NCBI Sequence Viewer  
  CAE06495 (Get FASTA)   NCBI Sequence Viewer  
  CAE09053 (Get FASTA)   NCBI Sequence Viewer  
  EAW91620 (Get FASTA)   NCBI Sequence Viewer  
  EAW91621 (Get FASTA)   NCBI Sequence Viewer  
  EAW91622 (Get FASTA)   NCBI Sequence Viewer  
  EAW91623 (Get FASTA)   NCBI Sequence Viewer  
  EAW91624 (Get FASTA)   NCBI Sequence Viewer  
  EAW91625 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000342535
  ENSP00000342535.5
  ENSP00000348169
  ENSP00000348169.2
  ENSP00000372320
  ENSP00000372320.1
  ENSP00000372325
  ENSP00000372325.1
  ENSP00000412638
  ENSP00000412638.1
  ENSP00000494046.1
  ENSP00000496594
  ENSP00000496594.1
  ENSP00000510011
  ENSP00000510011.1
GenBank Protein Q8NFZ3 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_055708   ⟸   NM_014893
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   Q8NFZ3 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157710   ⟸   NM_001164238
- Peptide Label: isoform 2 precursor
- UniProtKB: H0Y7G6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001193779   ⟸   NM_001206850
- Peptide Label: isoform 3
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006724937   ⟸   XM_006724874
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011529732   ⟸   XM_011531430
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011529730   ⟸   XM_011531428
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011529729   ⟸   XM_011531427
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011529731   ⟸   XM_011531429
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016885530   ⟸   XM_017030041
- Peptide Label: isoform X5
- UniProtKB: H0Y7G6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016885525   ⟸   XM_017030036
- Peptide Label: isoform X2
- UniProtKB: Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   Q8NFZ3 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016885528   ⟸   XM_017030039
- Peptide Label: isoform X3
- UniProtKB: A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016885529   ⟸   XM_017030040
- Peptide Label: isoform X4
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_024308258   ⟸   XM_024452490
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001352515   ⟸   NM_001365586
- Peptide Label: isoform 4
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001352520   ⟸   NM_001365591
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001352519   ⟸   NM_001365590
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001352513   ⟸   NM_001365584
- Peptide Label: isoform 4
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001352517   ⟸   NM_001365588
- Peptide Label: isoform 4
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001352521   ⟸   NM_001365592
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001352522   ⟸   NM_001365593
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000412638   ⟸   ENST00000413217
RefSeq Acc Id: ENSP00000342535   ⟸   ENST00000339174
RefSeq Acc Id: ENSP00000496594   ⟸   ENST00000643089
RefSeq Acc Id: ENSP00000348169   ⟸   ENST00000355905
RefSeq Acc Id: ENSP00000494046   ⟸   ENST00000645399
RefSeq Acc Id: ENSP00000372320   ⟸   ENST00000382868
RefSeq Acc Id: ENSP00000372325   ⟸   ENST00000382872
RefSeq Acc Id: NP_001381759   ⟸   NM_001394830
- Peptide Label: isoform 4
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381760   ⟸   NM_001394831
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000510011   ⟸   ENST00000684976
RefSeq Acc Id: XP_047298678   ⟸   XM_047442722
- Peptide Label: isoform X5
- UniProtKB: H0Y7G6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047298676   ⟸   XM_047442720
- Peptide Label: isoform X2
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047298675   ⟸   XM_047442719
- Peptide Label: isoform X2
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047298677   ⟸   XM_047442721
- Peptide Label: isoform X5
- UniProtKB: H0Y7G6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184244   ⟸   XM_054328269
- Peptide Label: isoform X5
- UniProtKB: H0Y7G6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184235   ⟸   XM_054328260
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184239   ⟸   XM_054328264
- Peptide Label: isoform X2
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184236   ⟸   XM_054328261
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184238   ⟸   XM_054328263
- Peptide Label: isoform X2
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184232   ⟸   XM_054328257
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184243   ⟸   XM_054328268
- Peptide Label: isoform X5
- UniProtKB: H0Y7G6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184242   ⟸   XM_054328267
- Peptide Label: isoform X5
- UniProtKB: H0Y7G6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184234   ⟸   XM_054328259
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184231   ⟸   XM_054328256
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184237   ⟸   XM_054328262
- Peptide Label: isoform X2
- UniProtKB: Q8NFZ3 (UniProtKB/Swiss-Prot),   Q8N5B6 (UniProtKB/Swiss-Prot),   Q7Z3T5 (UniProtKB/Swiss-Prot),   Q14D08 (UniProtKB/Swiss-Prot),   F5H6W0 (UniProtKB/Swiss-Prot),   Q9Y2F8 (UniProtKB/Swiss-Prot),   A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184233   ⟸   XM_054328258
- Peptide Label: isoform X1
- UniProtKB: B4DHI3 (UniProtKB/TrEMBL),   A6NMU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184240   ⟸   XM_054328265
- Peptide Label: isoform X3
- UniProtKB: A8K4S1 (UniProtKB/TrEMBL),   B3KP11 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054184241   ⟸   XM_054328266
- Peptide Label: isoform X4
Protein Domains
Carboxylesterase type B

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8NFZ3-F1-model_v2 AlphaFold Q8NFZ3 1-816 view protein structure

Promoters
RGD ID:6809479
Promoter ID:HG_KWN:68989
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:ENST00000382872,   OTTHUMT00000089067
Position:
Human AssemblyChrPosition (strand)Source
Build 36Y15,143,666 - 15,144,166 (+)MPROMDB
RGD ID:6809477
Promoter ID:HG_KWN:68990
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:ENST00000382868,   NM_014893,   OTTHUMT00000089064
Position:
Human AssemblyChrPosition (strand)Source
Build 36Y15,144,691 - 15,145,191 (+)MPROMDB
RGD ID:6809481
Promoter ID:HG_KWN:68991
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   Lymphoblastoid
Transcripts:NR_028319,   OTTHUMT00000089068
Position:
Human AssemblyChrPosition (strand)Source
Build 36Y15,145,256 - 15,145,767 (+)MPROMDB
RGD ID:6809478
Promoter ID:HG_KWN:68992
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000089066
Position:
Human AssemblyChrPosition (strand)Source
Build 36Y15,242,586 - 15,243,086 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:15529 AgrOrtholog
COSMIC NLGN4Y COSMIC
Ensembl Genes ENSG00000165246 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000339174 ENTREZGENE
  ENST00000339174.9 UniProtKB/Swiss-Prot
  ENST00000355905 ENTREZGENE
  ENST00000355905.6 UniProtKB/Swiss-Prot
  ENST00000382868 ENTREZGENE
  ENST00000382868.5 UniProtKB/TrEMBL
  ENST00000382872 ENTREZGENE
  ENST00000382872.5 UniProtKB/Swiss-Prot
  ENST00000413217 ENTREZGENE
  ENST00000413217.1 UniProtKB/TrEMBL
  ENST00000643089 ENTREZGENE
  ENST00000643089.1 UniProtKB/TrEMBL
  ENST00000645399.1 UniProtKB/TrEMBL
  ENST00000684976 ENTREZGENE
  ENST00000684976.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000165246 GTEx
HGNC ID HGNC:15529 ENTREZGENE
Human Proteome Map NLGN4Y Human Proteome Map
InterPro AB_hydrolase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CarbesteraseB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Carboxylesterase_B_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nlgn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:22829 UniProtKB/Swiss-Prot
NCBI Gene 22829 ENTREZGENE
OMIM 400028 OMIM
PANTHER NEUROLIGIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NEUROLIGIN-4, Y-LINKED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam COesterase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA38386 PharmGKB
PRINTS NEUROLIGIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE CARBOXYLESTERASE_B_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53474 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2R8YDT7_HUMAN UniProtKB/TrEMBL
  A6NMU8 ENTREZGENE, UniProtKB/TrEMBL
  A8K4S1 ENTREZGENE
  B3KP11 ENTREZGENE
  B4DHI3 ENTREZGENE, UniProtKB/TrEMBL
  F5H6W0 ENTREZGENE
  H0Y7G6 ENTREZGENE, UniProtKB/TrEMBL
  NLGNY_HUMAN UniProtKB/Swiss-Prot
  Q14D08 ENTREZGENE
  Q7Z3T5 ENTREZGENE
  Q8N5B6 ENTREZGENE
  Q8NFZ3 ENTREZGENE
  Q9Y2F8 ENTREZGENE
UniProt Secondary F5H6W0 UniProtKB/Swiss-Prot
  Q14D08 UniProtKB/Swiss-Prot
  Q7Z3T5 UniProtKB/Swiss-Prot
  Q8N5B6 UniProtKB/Swiss-Prot
  Q9Y2F8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-01 NLGN4Y  neuroligin 4 Y-linked    neuroligin 4, Y-linked  Symbol and/or name change 5135510 APPROVED