Gene: HBBP1 (hemoglobin, beta pseudogene 1)
Homo sapiens |
| Symbol: |
HBBP1
|
| Name: |
hemoglobin, beta pseudogene 1
|
| Description: |
INTERACTS WITH vincristine |
| Type: |
pseudo
|
| RefSeq Status: |
VALIDATED
|
| Related Functional Gene: |
HBB
|
| Latest Assembly: |
Human Genome Assembly GRCh37
|
| Position: |
| Map | Chr | Position | Strand | Source |
|---|
Human Alternate Assembly CHM1_1 | 11 | 5,177,432 - 5,179,066 | - | NCBI | Human Genome Assembly HuRef | 11 | 4,922,358 - 4,923,992 | - | NCBI | Human Genome Assembly GRCh37 | 11 | 5,263,184 - 5,264,822 | - | NCBI | Human Celera Assembly | 11 | 5,381,858 - 5,383,492 | - | NCBI | Human Genome Assembly Build 36 | 11 | 5,219,658 - 5,221,399 | - | NCBI | Human Cytogenetic Map | 11 | p15.5 | | NCBI |
|
| Model |
|
 Gene-Chemical Interaction Annotations
| vincristine | increases response to substance | EXP | | 6480464 | HBBP1 mRNA results in increased susceptibility to Vincristine | CTD | PMID:20864405 | |
 Gene-Chemical Interaction Annotations
 References - curated
 References - uncurated
Genomics
 Position Markers
| WI-11766 |
| Map | Chr | Position | Strand | Source |
|---|
Human NCBI RH Map | 11 | 24.0 | | UniSTS | Human Whitehead-RH Map | 11 | 42.1 | | UniSTS | Human GeneMap99-GB4 RH Map | 11 | 36.62 | | UniSTS | Human Genome Assembly HuRef | 11 | 4,922,382 - 4,922,506 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,263,208 - 5,263,332 | | UniSTS | Human Celera Assembly | 11 | 5,381,882 - 5,382,006 | | RGD | Human Genome Assembly Build 36 | 11 | 5,219,784 - 5,219,908 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| GDB:178389 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,924,499 - 4,924,919 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,329 - 5,265,749 | | UniSTS | Human Celera Assembly | 11 | 5,383,999 - 5,384,416 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,905 - 5,222,325 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| GDB:181105 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,924,478 - 4,924,638 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,308 - 5,265,468 | | UniSTS | Human Celera Assembly | 11 | 5,383,978 - 5,384,135 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,884 - 5,222,044 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| WI-17827 |
| Map | Chr | Position | Strand | Source |
|---|
Human NCBI RH Map | 11 | 24.0 | | UniSTS | Human Whitehead-RH Map | 11 | 42.3 | | UniSTS | Human GeneMap99-GB4 RH Map | 11 | 36.42 | | UniSTS | Human Genome Assembly HuRef | 11 | 4,925,010 - 4,925,137 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,840 - 5,265,967 | | UniSTS | Human Celera Assembly | 11 | 5,384,507 - 5,384,634 | | RGD | Human Genome Assembly Build 36 | 11 | 5,222,416 - 5,222,543 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| PMC314215P1 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,960 - 4,924,129 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,264,790 - 5,264,959 | | UniSTS | Human Celera Assembly | 11 | 5,383,460 - 5,383,629 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,366 - 5,221,535 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| ECD06308 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,779 - 4,924,491 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,264,609 - 5,265,321 | | UniSTS | Human Celera Assembly | 11 | 5,383,279 - 5,383,991 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,185 - 5,221,897 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| ECD06497 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,061 - 4,923,768 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,263,891 - 5,264,598 | | UniSTS | Human Celera Assembly | 11 | 5,382,561 - 5,383,268 | | RGD | Human Genome Assembly Build 36 | 11 | 5,220,467 - 5,221,174 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| ECD10503 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,924,906 - 4,925,506 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,736 - 5,266,336 | | UniSTS | Human Celera Assembly | 11 | 5,384,403 - 5,385,003 | | RGD | Human Genome Assembly Build 36 | 11 | 5,222,312 - 5,222,912 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| ECD15652 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,921,992 - 4,922,457 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,262,818 - 5,263,283 | | UniSTS | Human Celera Assembly | 11 | 5,381,492 - 5,381,957 | | RGD | Human Genome Assembly Build 36 | 11 | 5,219,394 - 5,219,859 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| ECD15653 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,922,511 - 4,922,976 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,263,337 - 5,263,802 | | UniSTS | Human Celera Assembly | 11 | 5,382,011 - 5,382,476 | | RGD | Human Genome Assembly Build 36 | 11 | 5,219,913 - 5,220,378 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97419 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,921,910 - 4,922,177 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,262,736 - 5,263,003 | | UniSTS | Human Celera Assembly | 11 | 5,381,410 - 5,381,677 | | RGD | Human Genome Assembly Build 36 | 11 | 5,219,312 - 5,219,579 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97420 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,922,164 - 4,922,413 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,262,990 - 5,263,239 | | UniSTS | Human Celera Assembly | 11 | 5,381,664 - 5,381,913 | | RGD | Human Genome Assembly Build 36 | 11 | 5,219,566 - 5,219,815 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97421 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,922,402 - 4,922,654 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,263,228 - 5,263,480 | | UniSTS | Human Celera Assembly | 11 | 5,381,902 - 5,382,154 | | RGD | Human Genome Assembly Build 36 | 11 | 5,219,804 - 5,220,056 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97422 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,922,631 - 4,922,880 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,263,457 - 5,263,706 | | UniSTS | Human Celera Assembly | 11 | 5,382,131 - 5,382,380 | | RGD | Human Genome Assembly Build 36 | 11 | 5,220,033 - 5,220,282 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97423 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,922,868 - 4,923,112 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,263,694 - 5,263,942 | | UniSTS | Human Celera Assembly | 11 | 5,382,368 - 5,382,612 | | RGD | Human Genome Assembly Build 36 | 11 | 5,220,270 - 5,220,518 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97424 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,089 - 4,923,319 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,263,919 - 5,264,149 | | UniSTS | Human Celera Assembly | 11 | 5,382,589 - 5,382,819 | | RGD | Human Genome Assembly Build 36 | 11 | 5,220,495 - 5,220,725 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97425 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,301 - 4,923,568 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,264,131 - 5,264,398 | | UniSTS | Human Celera Assembly | 11 | 5,382,801 - 5,383,068 | | RGD | Human Genome Assembly Build 36 | 11 | 5,220,707 - 5,220,974 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97426 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,545 - 4,923,794 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,264,375 - 5,264,624 | | UniSTS | Human Celera Assembly | 11 | 5,383,045 - 5,383,294 | | RGD | Human Genome Assembly Build 36 | 11 | 5,220,951 - 5,221,200 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97427 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,785 - 4,924,038 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,264,615 - 5,264,868 | | UniSTS | Human Celera Assembly | 11 | 5,383,285 - 5,383,538 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,191 - 5,221,444 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97428 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,999 - 4,924,243 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,264,829 - 5,265,073 | | UniSTS | Human Celera Assembly | 11 | 5,383,499 - 5,383,743 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,405 - 5,221,649 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97429 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,924,213 - 4,924,461 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,043 - 5,265,291 | | UniSTS | Human Celera Assembly | 11 | 5,383,713 - 5,383,961 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,619 - 5,221,867 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97430 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,924,316 - 4,924,540 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,146 - 5,265,370 | | UniSTS | Human Celera Assembly | 11 | 5,383,816 - 5,384,040 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,722 - 5,221,946 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97431 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,924,717 - 4,924,973 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,547 - 5,265,803 | | UniSTS | Human Celera Assembly | 11 | 5,384,214 - 5,384,470 | | RGD | Human Genome Assembly Build 36 | 11 | 5,222,123 - 5,222,379 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97432 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,924,957 - 4,925,210 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,787 - 5,266,040 | | UniSTS | Human Celera Assembly | 11 | 5,384,454 - 5,384,707 | | RGD | Human Genome Assembly Build 36 | 11 | 5,222,363 - 5,222,616 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97433 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,925,184 - 4,925,438 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,266,014 - 5,266,268 | | UniSTS | Human Celera Assembly | 11 | 5,384,681 - 5,384,935 | | RGD | Human Genome Assembly Build 36 | 11 | 5,222,590 - 5,222,844 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97434 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,925,434 - 4,925,677 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,266,264 - 5,266,507 | | UniSTS | Human Celera Assembly | 11 | 5,384,931 - 5,385,174 | | RGD | Human Genome Assembly Build 36 | 11 | 5,222,840 - 5,223,083 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| REN97435 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,925,652 - 4,925,891 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,266,482 - 5,266,721 | | UniSTS | Human Celera Assembly | 11 | 5,385,149 - 5,385,388 | | RGD | Human Genome Assembly Build 36 | 11 | 5,223,058 - 5,223,297 | | RGD | Human Cytogenetic Map | 11 | p15.5 | | UniSTS |
|
| stSG610837 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,922,188 - 4,923,445 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,263,014 - 5,264,275 | | UniSTS | Human Celera Assembly | 11 | 5,381,688 - 5,382,945 | | RGD | Human Genome Assembly Build 36 | 11 | 5,219,590 - 5,220,851 | | RGD |
|
| stSG610838 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,923,424 - 4,924,491 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,264,254 - 5,265,321 | | UniSTS | Human Celera Assembly | 11 | 5,382,924 - 5,383,991 | | RGD | Human Genome Assembly Build 36 | 11 | 5,220,830 - 5,221,897 | | RGD |
|
| stSG610839 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 11 | 4,924,472 - 4,925,970 | | UniSTS | Human Genome Assembly GRCh37 | 11 | 5,265,302 - 5,266,800 | | UniSTS | Human Celera Assembly | 11 | 5,383,972 - 5,385,467 | | RGD | Human Genome Assembly Build 36 | 11 | 5,221,878 - 5,223,376 | | RGD |
|
 QTLs in Region (Human Genome Assembly GRCh37)
| 1559350 | SCL90_H | Serum cholesterol level QTL 90 (human) | 1.7 | .003 | Lipid level | triglyceride | 11 | 4488579 | 30488579 | Human | | 1558691 | SCL8_H | Serum cholesterol level QTL 8 (human) | 1.2 | | Lipid level | HDL cholesterol | 11 | 5248301 | 7292012 | Human | | 2289212 | BW357_H | Body weight QTL 357 (human) | | .0365 | Body fat amount | percent fat | 11 | 1 | 17539910 | Human | | 2316700 | GLUCO262_H | Glucose level QTL 262 (human) | 1.5 | .061 | Glucose level | | 11 | 4912169 | 10720120 | Human | | 2316722 | GLUCO278_H | Glucose level QTL 278 (human) | 1.25 | .01371 | Glucose level | | 11 | 1 | 18988104 | Human | |