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Gene-Chemical Interaction Annotations
Gene-Chemical Interaction AnnotationsTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | 17alpha-ethynylestradiol | increases expression | ISO | RGD:1552386 | 6480464 | Ethinyl Estradiol results in increased expression of TLR6 mRNA | CTD | PMID:17942748 | 2,3,7,8-tetrachlorodibenzodioxine | affects expression | ISO | RGD:1303030 | 6480464 | Tetrachlorodibenzodioxin affects the expression of TLR6 mRNA | CTD | PMID:22298810 | 2,4-dinitrotoluene | affects expression | ISO | RGD:1303030 | 6480464 | 2,4-dinitrotoluene affects the expression of TLR6 mRNA | CTD | PMID:21346803 | 2,6-dinitrotoluene | affects expression | ISO | RGD:1303030 | 6480464 | 2,6-dinitrotoluene affects the expression of TLR6 mRNA | CTD | PMID:21346803 | benzo[a]pyrene | increases expression | ISO | RGD:1552386 | 6480464 | Benzo(a)pyrene results in increased expression of TLR6 mRNA | CTD | PMID:22228805 | benzo[a]pyrene | multiple interactions | ISO | RGD:1552386 | 6480464 | AHR protein affects the reaction [Benzo(a)pyrene affects the expression of TLR6 mRNA] | CTD | PMID:22228805 | butyric acid | increases expression | EXP | | 6480464 | Butyric Acid results in increased expression of TLR6 mRNA | CTD | PMID:15196572 | cadmium selenide | multiple interactions | EXP | | 6480464 | [cadmium selenide co-treated with zinc sulfide] results in increased expression of TLR6 mRNA | CTD | PMID:22342292 | choline | multiple interactions | ISO | RGD:1552386 | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of TLR6 mRNA | CTD | PMID:20938992 | cyclosporin A | increases expression | EXP | | 6480464 | Cyclosporine results in increased expression of TLR6 mRNA | CTD | PMID:20106945 | folic acid | multiple interactions | ISO | RGD:1552386 | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of TLR6 mRNA | CTD | PMID:20938992 | L-methionine | multiple interactions | ISO | RGD:1552386 | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of TLR6 mRNA | CTD | PMID:20938992 | lead diacetate | decreases expression | ISO | RGD:1303030 | 6480464 | lead acetate results in decreased expression of TLR6 mRNA | CTD | PMID:22641619 | mangiferin | decreases expression | ISO | RGD:1552386 | 6480464 | mangiferin results in decreased expression of TLR6 mRNA | CTD | PMID:15135318 | phorbol 13-acetate 12-myristate | multiple interactions | EXP | | 6480464 | [Zinc co-treated with Tetradecanoylphorbol Acetate] affects the expression of TLR6 mRNA | CTD | PMID:16979875 | rosiglitazone | decreases expression | ISO | RGD:1303030 | 6480464 | rosiglitazone results in decreased expression of TLR6 mRNA | CTD | PMID:21515302 | silver atom | increases expression | EXP | | 6480464 | Silver results in increased expression of TLR6 mRNA | CTD | PMID:22342292 | silver(0) | increases expression | EXP | | 6480464 | Silver results in increased expression of TLR6 mRNA | CTD | PMID:22342292 | titanium dioxide | increases expression | EXP | | 6480464 | titanium dioxide results in increased expression of TLR6 mRNA | CTD | PMID:22342292 | zinc atom | multiple interactions | EXP | | 6480464 | [Zinc co-treated with Tetradecanoylphorbol Acetate] affects the expression of TLR6 mRNA | CTD | PMID:16979875 | zinc(0) | multiple interactions | EXP | | 6480464 | [Zinc co-treated with Tetradecanoylphorbol Acetate] affects the expression of TLR6 mRNA | CTD | PMID:16979875 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology Annotations
Molecular Pathway Annotations| External Database Links | |
| KEGG Pathway | Chagas disease (American trypanosomiasis) |
| Phagosome | |
| Toll-like receptor signaling pathway | |
| Tuberculosis | |
| Pathway Interaction Database | Endogenous TLR signaling (PID:200208) |
Disease Annotations
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Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Molecular Pathway Annotations
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| External Database Links | |
| KEGG Pathway | Chagas disease (American trypanosomiasis) |
| Phagosome | |
| Toll-like receptor signaling pathway | |
| Tuberculosis | |
| Pathway Interaction Database | Endogenous TLR signaling (PID:200208) |
References - curated| 1. |
Fong DJ, etal., Immunology. 2010 May;130(1):125-36. Epub 2010 Jan 11. |
| 2. |
Fuchs B, etal., Int Arch Allergy Immunol. 2010;152(2):131-9. Epub 2009 Dec 16. |
| 3. |
GOA_HUMAN data from the GO Consortium |
| 4. |
Guo LH, etal., Biochem Biophys Res Commun. 2006 Oct 27;349(3):1156-62. Epub 2006 Sep 1. |
| 5. |
Hubschle T, etal., Am J Physiol Regul Integr Comp Physiol. 2006 Jan;290(1):R180-7. Epub 2005 Sep 8. |
| 6. |
Kerber-Momot T, etal., Inflammation. 2010 Feb;33(1):58-64. |
| 7. |
Kesh S, etal., Ann N Y Acad Sci. 2005 Dec;1062:95-103. |
| 8. |
Knorr C, etal., Brain Res. 2008 Apr 18;1205:36-46. Epub 2008 Feb 21. |
| 9. |
Kormann MS, etal., J Allergy Clin Immunol. 2008 Jul;122(1):86-92, 92.e1-8. Epub 2008 Jun 10. |
| 10. |
Kumar H, etal., Int Rev Immunol. 2011 Feb;30(1):16-34. |
| 11. |
Murawski MR, etal., J Virol. 2009 Feb;83(3):1492-500. Epub 2008 Nov 19. |
| 12. |
Pipeline to import KEGG annotations from KEGG into RGD Pathway Ontology |
| 13. |
Qian FH, etal., J Investig Allergol Clin Immunol. 2010;20(4):340-6. |
| 14. |
RGD automated import pipeline for gene-chemical interactions |
| 15. |
Tantisira K, etal., Genes Immun. 2004 Aug;5(5):343-6. |
References - uncurated| PubMed | 10231569 |
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RGD Disease Portals| TLR6 has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| TLR6 (Homo sapiens) |
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| Tlr6 (Mus musculus) |
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| Tlr6 (Rattus norvegicus) |
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Position Markers| PMC128073P7 |
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QTLs in Region (Human Genome Assembly GRCh37)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NG_028087 | (Get FASTA) | Search GEO for Microarray Profiles |
| NM_006068 | (Get FASTA) | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AB020807 | (Get FASTA) | Search GEO for Microarray Profiles |
| AB445652 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01004114 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01004115 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AC108044 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK313618 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01014117 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC111755 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BF512068 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH471069 | (Get FASTA) | Search GEO for Microarray Profiles | |
| DA619469 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU170528 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU170529 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU170531 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU170532 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU170533 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU170534 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU170536 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195541 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195542 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195543 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195544 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195545 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195546 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195547 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195548 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195550 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195551 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195553 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195554 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195555 | (Get FASTA) | Search GEO for Microarray Profiles | |
| EU195557 | (Get FASTA) | Search GEO for Microarray Profiles | |
| JA738605 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_006068 | |||||||||||||||||||||||||
| RefSeq Status: | REVIEWED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_006059 | |||||||||||||||||||||||||
| Peptide Label: | precursor | |||||||||||||||||||||||||
| Position: |
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Protein Sequences| Protein RefSeqs | NP_006059 | (Get FASTA) |
| GenBank Protein | AAI11756 | (Get FASTA) |
| ABW37063 | (Get FASTA) | |
| ABW37064 | (Get FASTA) | |
| ABW37066 | (Get FASTA) | |
| ABW37067 | (Get FASTA) | |
| ABW37068 | (Get FASTA) | |
| ABW37069 | (Get FASTA) | |
| ABW37071 | (Get FASTA) | |
| ABY67117 | (Get FASTA) | |
| ABY67118 | (Get FASTA) | |
| ABY67119 | (Get FASTA) | |
| ABY67120 | (Get FASTA) | |
| ABY67121 | (Get FASTA) | |
| ABY67122 | (Get FASTA) | |
| ABY67123 | (Get FASTA) | |
| ABY67124 | (Get FASTA) | |
| ABY67126 | (Get FASTA) | |
| ABY67127 | (Get FASTA) | |
| ABY67129 | (Get FASTA) | |
| ABY67130 | (Get FASTA) | |
| ABY67131 | (Get FASTA) | |
| ABY67133 | (Get FASTA) | |
| BAA78631 | (Get FASTA) | |
| BAG36380 | (Get FASTA) | |
| BAG55049 | (Get FASTA) | |
| CCF76955 | (Get FASTA) | |
| EAW92902 | (Get FASTA) | |
| Q9Y2C9 | (Get FASTA) |
External Database Links| Database | Acc Id | Source(s) |
| COSMIC | TLR6 | COSMIC |
| Ensembl Genes | ENSG00000174130 | ENTREZGENE |
| Ensembl Protein | ENSP00000389600 | ENTREZGENE |
| Ensembl Transcript | ENST00000436693 | ENTREZGENE |
| Entrez Gene | 10333 | ENTREZGENE |
| Germonline | ENSG00000174130 | |
| HGNC ID | 16711 | ENTREZGENE |
| HomoloGene Group ID | 21223 | ENTREZGENE |
| HPRD ID | 05656 | ENTREZGENE |
| InterPro | Cys-rich_flank_reg_C | UniProtKB/Swiss-Prot |
| Leu-rich_rpt | UniProtKB/Swiss-Prot | |
| TIR_dom | UniProtKB/Swiss-Prot | |
| TLR6 | UniProtKB/Swiss-Prot | |
| Toll-like_receptor | UniProtKB/Swiss-Prot | |
| IPI | IPI00294125 | UniProtKB/Swiss-Prot |
| IPI00718965 | UniProtKB/TrEMBL | |
| IPI00966841 | UniProtKB/TrEMBL | |
| KEGG Report | hsa:10333 | ENTREZGENE, UniProtKB/Swiss-Prot |
| OMIM | 605403 | OMIM |
| PANTHER | PTHR24365:SF130 | UniProtKB/Swiss-Prot |
| Pfam | LRRCT | UniProtKB/Swiss-Prot |
| TIR | UniProtKB/Swiss-Prot | |
| PharmGKB | PA38183 | PharmGKB |
| PIRSF | Toll-like_receptor | UniProtKB/Swiss-Prot |
| PROSITE | LRR | UniProtKB/Swiss-Prot |
| TIR | UniProtKB/Swiss-Prot | |
| SMART | LRRCT | UniProtKB/Swiss-Prot |
| TIR | UniProtKB/Swiss-Prot | |
| Superfamily-SCOP | TIR | UniProtKB/Swiss-Prot |
| UniGene | Hs.575090 | ENTREZGENE |
| Hs.743572 | ENTREZGENE | |
| UniProt | B2R933_HUMAN | UniProtKB/TrEMBL |
| D6R979_HUMAN | UniProtKB/TrEMBL | |
| D6RAV7_HUMAN | UniProtKB/TrEMBL | |
| TLR6_HUMAN | UniProtKB/Swiss-Prot |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2011-08-16 | TLR6 | toll-like receptor 6 | TLR6 | toll-like receptor 6 | Symbol and/or name change | 39860 | APPROVED |
| 2011-07-27 | TLR6 | toll-like receptor 6 | TLR6 | toll-like receptor 6 | Symbol and/or name change | 39860 | APPROVED |
| More on TLR6 | |||
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Entrez Gene | ||
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Ensembl Gene | ||
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HGNC Report | ||
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NCBI Map Viewer | ||
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Vista | ||
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Vista + UCSC | ||
| RGD Object Information | |
| RGD ID: | 1344850 |
| Created: | 2005-03-08 |
| Species: | Homo sapiens |
| Last Modified: | 2013-04-23 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




