Or6c66g-ps1 (olfactory receptor family 6 subfamily C member 66G, pseudogene 1) - Rat Genome Database

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Gene: Or6c66g-ps1 (olfactory receptor family 6 subfamily C member 66G, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Or6c66g-ps1
Name: olfactory receptor family 6 subfamily C member 66G, pseudogene 1
RGD ID: 1333995
Description: olfactory receptor pseudogene
Type: pseudo
RefSeq Status: REVIEWED
Previously known as: olfactory receptor pseudogene 1604; Olr1604-ps
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81436,627,775 - 36,628,647 (-)NCBIGRCr8
mRatBN7.21436,273,821 - 36,274,693 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx1436,619,633 - 36,620,505 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01437,924,378 - 37,925,250 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01436,412,710 - 36,413,582 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01438,838,157 - 38,839,029 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01438,647,671 - 38,648,543 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41438,730,005 - 38,730,677 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11438,732,111 - 38,733,049 (-)NCBI
Celera1435,506,325 - 35,507,197 (-)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141762256142337007Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2324617Coatc2Coat color QTL 20.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)143076702539153750Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_003897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-15838 BioCyc
NCBI Gene 405628 ENTREZGENE
PhenoGen Or6c66g-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-16 Or6c66g-ps1  olfactory receptor family 6 subfamily C member 66G, pseudogene 1  Olr1604-ps  olfactory receptor pseudogene 1604  Symbol and Name Changed 1299863 APPROVED
2005-02-04 Olr1604-ps  olfactory receptor pseudogene 1604      Symbol and Name status set to approved 70820 APPROVED