Abcb1b (ATP-binding cassette, sub-family B member 1B) - Rat Genome Database

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Gene: Abcb1b (ATP-binding cassette, sub-family B member 1B) Mus musculus
Analyze
Symbol: Abcb1b
Name: ATP-binding cassette, sub-family B member 1B (Ensembl:ATP-binding cassette, sub-family B (MDR/TAP), member 1B)
RGD ID: 1332185
MGI Page MGI
Description: Predicted to enable several functions, including ATP binding activity; ATPase-coupled intramembrane lipid transporter activity; and ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including G2/M transition of mitotic cell cycle; Sertoli cell barrier remodeling; and lipid translocation. Predicted to act upstream of or within lipid transport. Located in intercellular canaliculus. Is expressed in several structures, including central nervous system; early conceptus; oocyte; and small intestine. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); drug dependence (multiple); human immunodeficiency virus infectious disease (multiple); inflammatory bowel disease (multiple); and leukemia (multiple). Orthologous to human ABCB1 (ATP binding cassette subfamily B member 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Abcb; Abcb1; ATP-binding cassette sub-family B member 1; ATP-binding cassette sub-family B member 1B; ATP-binding cassette, sub-family B (MDR/TAP), member 1B; ATP-dependent translocase ABCB1; md; mdr; Mdr1; Mdr1b; multidrug resistance protein 1; multidrug resistance protein 1B; P glycoprotein 1; P-glycoprotein 1; Pgy; Pgy-; Pgy-1; Pgy1; phospholipid transporter ABCB1
RGD Orthologs
Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3958,848,147 - 8,916,314 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl58,848,147 - 8,916,315 (+)EnsemblGRCm39 Ensembl
GRCm3858,798,147 - 8,866,314 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl58,798,147 - 8,866,315 (+)EnsemblGRCm38mm10GRCm38
MGSCv3758,798,147 - 8,866,314 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3658,804,192 - 8,872,314 (+)NCBIMGSCv36mm8
Celera58,717,809 - 8,786,039 (+)NCBICelera
Cytogenetic Map5A1NCBI
cM Map53.43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(+)-schisandrin B  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP,ISO)
1,9-dideoxyforskolin  (ISO)
1-nitropropane  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-diaminotoluene  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-diaminotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-(3,4-dimethoxyphenyl)-5-\{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino\}-2-(propan-2-yl)pentanenitrile  (EXP,ISO)
2-acetamidofluorene  (ISO)
2-nitro-p-phenylenediamine  (ISO)
2-nitrofluorene  (ISO)
2-nitropropane  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-acetylaminofluorene  (ISO)
4-hydroxyphenyl retinamide  (EXP)
4-nitro-1,2-phenylenediamine  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP)
acetamide  (ISO)
acetylsalicylic acid  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (EXP)
amiodarone  (EXP)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
berberine  (ISO)
bifenthrin  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bis-4-nitrophenyl phosphate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
BMY-25067  (ISO)
bromocriptine  (ISO)
cadmium dichloride  (EXP,ISO)
capsaicin  (ISO)
carbamazepine  (EXP)
carbon nanotube  (EXP)
cefaloridine  (ISO)
chloroform  (ISO)
chlorpromazine  (ISO)
cholic acid  (EXP)
choline  (EXP,ISO)
chromium(6+)  (EXP,ISO)
ciprofibrate  (EXP)
cisplatin  (EXP,ISO)
clofibric acid  (ISO)
clozapine  (ISO)
coptisine  (ISO)
crocidolite asbestos  (EXP)
Cuprizon  (ISO)
curcumin  (EXP)
cyclosporin A  (ISO)
cyproconazole  (ISO)
DDE  (EXP)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP)
dextropropoxyphene  (EXP)
dibenz[a,h]anthracene  (EXP)
dichlorine  (ISO)
diclofenac  (ISO)
digoxin  (EXP)
dioxygen  (EXP)
diquat  (EXP)
doxorubicin  (EXP,ISO)
Echimidine  (ISO)
emodin  (ISO)
epinastine  (EXP)
epoxiconazole  (EXP,ISO)
eticlopride(1+)  (ISO)
everolimus  (EXP)
fipronil  (ISO)
fluoxetine  (ISO)
fluvoxamine  (EXP)
folic acid  (EXP)
fulvestrant  (ISO)
furan  (ISO)
genistein  (EXP,ISO)
gentamycin  (ISO)
Heliotrine  (ISO)
hydrogen peroxide  (ISO)
indole-3-methanol  (ISO)
inulin  (EXP)
irinotecan  (EXP)
ivermectin  (EXP)
kainic acid  (ISO)
L-methionine  (EXP,ISO)
Lasiocarpine  (ISO)
lipopolysaccharide  (EXP,ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
lithocholic acid  (EXP)
loperamide  (EXP)
loratadine  (EXP)
LY294002  (EXP)
manganese(II) chloride  (ISO)
mercury atom  (ISO)
mercury dichloride  (EXP,ISO)
mercury(0)  (ISO)
metformin  (ISO)
methadone  (ISO)
methapyrilene  (ISO)
methotrexate  (EXP)
metoclopramide  (EXP)
mitomycin C  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
N,N-dimethylformamide  (ISO)
N-hydroxy-2-acetamidofluorene  (ISO)
N-hydroxy-PhIP  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
Nonylphenol  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
olanzapine  (ISO)
orphenadrine  (ISO)
ozone  (ISO)
paclitaxel  (EXP)
paliperidone palmitate  (EXP)
palmatine  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenytoin  (EXP)
PhIP  (EXP)
pirinixic acid  (EXP,ISO)
prazosin  (EXP)
prednisone  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
prochloraz  (EXP)
progesterone  (ISO)
quinidine  (EXP,ISO)
quinine  (ISO)
quinpirole  (ISO)
reactive oxygen species  (ISO)
resveratrol  (EXP)
risperidone  (EXP)
rotenone  (ISO)
saquinavir  (EXP)
SDZ PSC 833  (ISO)
Selamectin  (EXP)
senecionine  (ISO)
Senkirkine  (ISO)
sodium arsenite  (EXP,ISO)
sodium chloride  (EXP)
soybean oil  (ISO)
spiperone  (ISO)
streptozocin  (EXP)
tamoxifen  (ISO)
Technetium tc 99m sestamibi  (EXP)
testosterone  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP,ISO)
thalidomide  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
toluene  (ISO)
trabectedin  (EXP,ISO)
trichloroethene  (ISO)
trimellitic anhydride  (EXP)
Triptolide  (EXP,ISO)
troglitazone  (ISO)
tunicamycin  (EXP)
vancomycin  (EXP)
verapamil  (EXP,ISO)
vincaleukoblastine  (ISO)
vincristine  (ISO)
zearalenone  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Brain erythropoietin receptor expression in Alzheimer disease and mild cognitive impairment. Assaraf MI, etal., J Neuropathol Exp Neurol. 2007 May;66(5):389-98.
2. The multidrug transporter hypothesis of drug resistance in epilepsy: Proof-of-principle in a rat model of temporal lobe epilepsy. Brandt C, etal., Neurobiol Dis. 2006 Oct;24(1):202-11. Epub 2006 Aug 22.
3. Increased intestinal P-glycoprotein expression and activity with progression of diabetes and its modulation by epigallocatechin-3-gallate: Evidence from pharmacokinetic studies. Dash RP, etal., Eur J Pharmacol. 2015 Nov 15;767:67-76. doi: 10.1016/j.ejphar.2015.10.009. Epub 2015 Oct 10.
4. Influence of intermittent hypoxia on myocardial and hepatic P-glycoprotein expression in a rodent model. Dopp JM, etal., Pharmacotherapy. 2009 Apr;29(4):365-72.
5. Molecular mechanism of altered ezetimibe disposition in nonalcoholic steatohepatitis. Hardwick RN, etal., Drug Metab Dispos. 2012 Mar;40(3):450-60. doi: 10.1124/dmd.111.041095. Epub 2011 Nov 23.
6. Phospholipid alterations in hepatocyte membranes and transporter protein changes in cholestatic rat model. Hyogo H, etal., Dig Dis Sci. 2001 Oct;46(10):2089-97.
7. PSC 833, an inhibitor of P-glycoprotein inhibits 1,2-dimethylhydrazine-induced colorectal carcinogenesis in male Fischer F344 rats. Kankesan J, etal., Anticancer Res. 2006 Mar-Apr;26(2A):995-9.
8. Etoposide nanocarriers suppress glioma cell growth by intracellular drug delivery and simultaneous P-glycoprotein inhibition. Lamprecht A and Benoit JP, J Control Release. 2006 May 15;112(2):208-13. Epub 2006 Feb 28.
9. Impaired function and expression of P-glycoprotein in blood-brain barrier of streptozotocin-induced diabetic rats. Liu H, etal., Brain Res. 2006 Dec 6;1123(1):245-52. Epub 2006 Oct 30.
10. Functional induction of P-glycoprotein in the blood-brain barrier of streptozotocin-induced diabetic rats: evidence for the involvement of nuclear factor-kappaB, a nitrosative stress-sensitive transcription factor, in the regulation. Maeng HJ, etal., Drug Metab Dispos. 2007 Nov;35(11):1996-2005. Epub 2007 Jul 30.
11. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
12. MGDs mouse GO annotations MGD data from the GO Consortium
13. MGD IEA MGD IEA
14. Down-regulation of intestinal drug transporters in chronic renal failure in rats. Naud J, etal., J Pharmacol Exp Ther. 2007 Mar;320(3):978-85. Epub 2006 Nov 29.
15. Moderate increase in Mdr1a/1b expression causes in vivo resistance to doxorubicin in a mouse model for hereditary breast cancer. Pajic M, etal., Cancer Res. 2009 Aug 15;69(16):6396-404. Epub 2009 Aug 4.
16. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
17. Polymorphisms in multidrug resistance 1 (MDR1) gene are associated with refractory Crohn disease and ulcerative colitis. Potocnik U, etal., Genes Immun. 2004 Nov;5(7):530-9.
18. Transient expression of MDR-1/P-glycoprotein in a model of partial cortical devascularization. Ramos AJ, etal., Cell Mol Neurobiol. 2004 Feb;24(1):101-7.
19. Mouse MP Annotation Import Pipeline RGD automated import pipeline
20. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
21. Expression of ATP-binding cassette membrane transporters in a HIV-1 transgenic rat model. Robillard KR, etal., Biochem Biophys Res Commun. 2014 Feb 21;444(4):531-6. doi: 10.1016/j.bbrc.2014.01.092. Epub 2014 Jan 25.
22. HIV-1 viral envelope glycoprotein gp120 triggers an inflammatory response in cultured rat astrocytes and regulates the functional expression of P-glycoprotein. Ronaldson PT and Bendayan R, Mol Pharmacol. 2006 Sep;70(3):1087-98. Epub 2006 Jun 21.
23. Association of multidrug resistance in epilepsy with a polymorphism in the drug-transporter gene ABCB1. Siddiqui A, etal., N Engl J Med 2003 Apr 10;348(15):1442-8.
24. Changes in CNS cells in hyperammonemic portal hypertensive rats. Tallis S, etal., J Neurochem. 2014 Feb;128(3):431-44. doi: 10.1111/jnc.12458. Epub 2013 Oct 24.
25. Activation of distinct multidrug-resistance (P-glycoprotein) genes during rat liver regeneration and hepatocarcinogenesis. Teeter LD, etal., Mol Carcinog. 1993;8(2):67-73.
26. Selective and persistent upregulation of mdr1b mRNA and P-glycoprotein in the parahippocampal cortex of chronic epileptic rats. van Vliet E, etal., Epilepsy Res 2004 Jul-Aug;60(2-3):203-13.
27. Up-regulation of the multidrug resistance genes, Mrp1 and Mdr1b, and down-regulation of the organic anion transporter, Mrp2, and the bile salt transporter, Spgp, in endotoxemic rat liver. Vos TA, etal., Hepatology. 1998 Dec;28(6):1637-44.
Additional References at PubMed
PMID:1302014   PMID:1324224   PMID:1346495   PMID:1346747   PMID:1360278   PMID:1627461   PMID:1671222   PMID:1683707   PMID:1686837   PMID:1783386   PMID:1969609   PMID:1969610  
PMID:1972547   PMID:1976255   PMID:1980424   PMID:2069718   PMID:2248681   PMID:2431283   PMID:2471060   PMID:2473069   PMID:2570420   PMID:2573836   PMID:2887402   PMID:3022150  
PMID:3380797   PMID:3389736   PMID:3455770   PMID:3768958   PMID:7542878   PMID:7592715   PMID:7653514   PMID:7777557   PMID:7790384   PMID:7814632   PMID:7832992   PMID:7873877  
PMID:7894155   PMID:7894173   PMID:7903262   PMID:7903303   PMID:7911682   PMID:7916013   PMID:8081873   PMID:8094303   PMID:8094367   PMID:8096513   PMID:8105374   PMID:8106147  
PMID:8172879   PMID:8499659   PMID:8543148   PMID:8547326   PMID:8620476   PMID:8633005   PMID:8763339   PMID:8763343   PMID:8887537   PMID:8889548   PMID:8995758   PMID:9097955  
PMID:9108099   PMID:9196326   PMID:9260924   PMID:9413174   PMID:9476142   PMID:9641561   PMID:9717696   PMID:9778357   PMID:10198174   PMID:10230766   PMID:10349636   PMID:10384057  
PMID:10433968   PMID:10453001   PMID:10488067   PMID:10552998   PMID:10562306   PMID:10617694   PMID:10675353   PMID:10725249   PMID:10781286   PMID:10837715   PMID:10906391   PMID:10922068  
PMID:11042159   PMID:11074607   PMID:11076861   PMID:11106262   PMID:11134265   PMID:11196684   PMID:11217851   PMID:11245453   PMID:11292625   PMID:11313959   PMID:11473059   PMID:11484761  
PMID:11739114   PMID:11826402   PMID:12068294   PMID:12160837   PMID:12213137   PMID:12218177   PMID:12226475   PMID:12296850   PMID:12376467   PMID:12466851   PMID:12477932   PMID:12615699  
PMID:12662900   PMID:12888779   PMID:12904583   PMID:14550684   PMID:14681479   PMID:14755051   PMID:14756802   PMID:14983033   PMID:15240672   PMID:15328029   PMID:15382145   PMID:15479431  
PMID:15749056   PMID:15752739   PMID:15774938   PMID:15805252   PMID:15917342   PMID:16002779   PMID:16105665   PMID:16141072   PMID:16141073   PMID:16239972   PMID:16458078   PMID:16565717  
PMID:16602821   PMID:16611851   PMID:16651435   PMID:16939683   PMID:16959944   PMID:17015433   PMID:17047491   PMID:17075973   PMID:17203221   PMID:17303067   PMID:17440929   PMID:17481607  
PMID:17617921   PMID:17707334   PMID:17709403   PMID:17828742   PMID:17851469   PMID:17975156   PMID:18006147   PMID:18215618   PMID:18506003   PMID:18547429   PMID:18556350   PMID:18614015  
PMID:18703598   PMID:18787193   PMID:18799693   PMID:19067785   PMID:19426700   PMID:19429129   PMID:19567673   PMID:19650158   PMID:19654441   PMID:19920203   PMID:19997559   PMID:20021412  
PMID:20103600   PMID:20230790   PMID:20388796   PMID:20438811   PMID:20470373   PMID:20583968   PMID:20664173   PMID:20670210   PMID:20709040   PMID:20963470   PMID:21262843   PMID:21267068  
PMID:21304228   PMID:21351087   PMID:21351274   PMID:21575142   PMID:21721528   PMID:21763326   PMID:21873635   PMID:21881209   PMID:21949682   PMID:22342565   PMID:22426312   PMID:22451472  
PMID:22454535   PMID:22536451   PMID:22545122   PMID:22563480   PMID:22721613   PMID:22767648   PMID:22768295   PMID:22780103   PMID:22864744   PMID:22967998   PMID:23085402   PMID:23103855  
PMID:23168528   PMID:23212123   PMID:23422148   PMID:23454352   PMID:23461902   PMID:23559630   PMID:23596979   PMID:23616082   PMID:23754525   PMID:23827160   PMID:23881407   PMID:24037730  
PMID:24155053   PMID:24297779   PMID:24334255   PMID:24647572   PMID:24825346   PMID:24948812   PMID:25015657   PMID:25419811   PMID:25868794   PMID:25932627   PMID:25991605   PMID:26250653  
PMID:26319048   PMID:26416771   PMID:26586297   PMID:26651614   PMID:26780497   PMID:26792401   PMID:26823559   PMID:27531061   PMID:27616577   PMID:27617863   PMID:27678410   PMID:27931149  
PMID:27984797   PMID:28025333   PMID:28216407   PMID:28283574   PMID:28401939   PMID:28671633   PMID:28702798   PMID:29091768   PMID:29262351   PMID:30146480   PMID:30222077   PMID:30897286  
PMID:30898898   PMID:31324853   PMID:32087611   PMID:32302378   PMID:32325033   PMID:32554809   PMID:32571913   PMID:33159885   PMID:33327747   PMID:33521698   PMID:33913482   PMID:34403652  
PMID:34650521   PMID:34700018   PMID:34876109   PMID:35083640   PMID:35341895   PMID:35997049   PMID:36270516  


Genomics

Comparative Map Data
Abcb1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3958,848,147 - 8,916,314 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl58,848,147 - 8,916,315 (+)EnsemblGRCm39 Ensembl
GRCm3858,798,147 - 8,866,314 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl58,798,147 - 8,866,315 (+)EnsemblGRCm38mm10GRCm38
MGSCv3758,798,147 - 8,866,314 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3658,804,192 - 8,872,314 (+)NCBIMGSCv36mm8
Celera58,717,809 - 8,786,039 (+)NCBICelera
Cytogenetic Map5A1NCBI
cM Map53.43NCBI
Abcb1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8426,197,706 - 26,280,156 (-)NCBIGRCr8
mRatBN7.2425,242,761 - 25,325,194 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl425,242,798 - 25,325,199 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx430,241,677 - 30,323,456 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0426,167,915 - 26,249,690 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0424,554,567 - 24,629,857 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0422,225,123 - 22,307,577 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl422,133,521 - 22,425,515 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0422,161,597 - 22,244,735 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4421,829,489 - 21,912,239 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1421,829,488 - 21,912,239 (+)NCBI
Celera420,736,092 - 20,817,649 (-)NCBICelera
Cytogenetic Map4q12NCBI

Variants

.
Variants in Abcb1b
2410 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:75
Count of miRNA genes:72
Interacting mature miRNAs:74
Transcripts:ENSMUST00000009058
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13442491Mecth1_mmechanosensation threshold 1 (mouse)5451800019834998Mouse
4141207Imrfq1_mimmune response to Factor IX QTL 1 (mouse)Not determined5812411742124239Mouse
15039371Nmrs21_mNAFLD-associated magnetic resonance shift 21 (mouse)5350482337504823Mouse
1357478Kdnw1_mkidney weight 1 (mouse)Not determined5891594940529869Mouse
10412081Bwq13_mbody weight QTL 13 (mouse)Not determined5123606323Mouse
4141234Pbwg14_mpostnatal body weight growth 14 (mouse)Not determined5121273552Mouse
1301468Eye1_meye weight 1 (mouse)Not determined5121929650Mouse
12904958Gmmq8_mgastrocnemius muscle mass QTL 8 (mouse)5129421124Mouse
7394748Mom5_mmodifier of Min 5 (mouse)Not determined5884767233475637Mouse
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
12738412Lfibq4_mliver fibrosis QTL 4 (mouse)5315000020799180Mouse
10401122Pgia41_mproteoglycan induced arthritis 41 (mouse)Not determined582314434823280Mouse
1301806Actd2_mactivity-distance traveled 2 (mouse)Not determined5538452039384652Mouse

Markers in Region
C85942  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Whitehead/MRC_RH50.0UniSTS
AW113832  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3858,958,965 - 8,959,071UniSTSGRCm38
MGSCv3758,958,965 - 8,959,071UniSTSGRCm37
Celera58,878,374 - 8,878,480UniSTS
Cytogenetic Map5A1UniSTS
cM Map51.0UniSTS
cM Map51.0UniSTS
Whitehead/MRC_RH545.22UniSTS
D5Mit146  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3858,840,693 - 8,840,817UniSTSGRCm38
MGSCv3758,840,693 - 8,840,817UniSTSGRCm37
Celera58,760,356 - 8,760,474UniSTS
cM Map51.0UniSTS
Whitehead Genetic50.0UniSTS
Whitehead_YAC5 UniSTS
D5Mit47  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3858,865,949 - 8,866,062UniSTSGRCm38
MGSCv3758,865,949 - 8,866,062UniSTSGRCm37
Celera58,785,674 - 8,785,787UniSTS
cM Map51.0UniSTS
Whitehead Genetic50.0UniSTS
D5Mit48  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3858,797,672 - 8,797,875UniSTSGRCm38
MGSCv3758,797,672 - 8,797,875UniSTSGRCm37
Celera58,717,334 - 8,717,537UniSTS
Cytogenetic Map5A1UniSTS
cM Map51.0UniSTS
Whitehead Genetic50.0UniSTS
UniSTS:235127  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3858,813,266 - 8,813,540UniSTSGRCm38
MGSCv3758,813,266 - 8,813,540UniSTSGRCm37
Celera58,732,928 - 8,733,202UniSTS
UniSTS:225194  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3858,865,998 - 8,866,169UniSTSGRCm38
MGSCv3758,865,998 - 8,866,169UniSTSGRCm37
Celera58,785,723 - 8,785,894UniSTS
Abcb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3858,797,670 - 8,797,767UniSTSGRCm38
MGSCv3758,797,670 - 8,797,767UniSTSGRCm37
Celera58,717,332 - 8,717,429UniSTS
Cytogenetic Map5A1UniSTS
cM Map51.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_011075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC140398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC151474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF033025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW047425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC150811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG080311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ829721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY435708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  C85942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV651684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M14757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M57524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M60348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000009058   ⟹   ENSMUSP00000009058
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,848,186 - 8,916,315 (+)Ensembl
GRCm38.p6 Ensembl58,798,186 - 8,866,315 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196048
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,901,860 - 8,904,885 (+)Ensembl
GRCm38.p6 Ensembl58,851,860 - 8,854,885 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196580   ⟹   ENSMUSP00000143612
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,848,153 - 8,863,651 (+)Ensembl
GRCm38.p6 Ensembl58,798,153 - 8,813,651 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196819
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,899,333 - 8,899,821 (+)Ensembl
GRCm38.p6 Ensembl58,849,333 - 8,849,821 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197961
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,890,361 - 8,903,626 (+)Ensembl
GRCm38.p6 Ensembl58,840,361 - 8,853,626 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198650   ⟹   ENSMUSP00000143023
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,901,592 - 8,915,935 (+)Ensembl
GRCm38.p6 Ensembl58,851,592 - 8,865,935 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199546
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,875,290 - 8,877,759 (+)Ensembl
GRCm38.p6 Ensembl58,825,290 - 8,827,759 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199955   ⟹   ENSMUSP00000143766
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,848,147 - 8,899,821 (+)Ensembl
GRCm38.p6 Ensembl58,798,147 - 8,849,821 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl58,901,387 - 8,903,785 (+)Ensembl
GRCm38.p6 Ensembl58,851,387 - 8,853,785 (+)Ensembl
RefSeq Acc Id: NM_011075   ⟹   NP_035205
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3958,848,147 - 8,916,314 (+)NCBI
GRCm3858,798,147 - 8,866,314 (+)NCBI
MGSCv3758,798,147 - 8,866,314 (+)RGD
Celera58,717,809 - 8,786,039 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030254200   ⟹   XP_030110060
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3958,870,355 - 8,916,224 (+)NCBI
GRCm3858,820,350 - 8,866,224 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164873   ⟹   XP_036020766
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3958,878,961 - 8,916,224 (+)NCBI
Sequence:
RefSeq Acc Id: NP_035205   ⟸   NM_011075
- UniProtKB: P06795 (UniProtKB/Swiss-Prot),   B2RUR3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030110060   ⟸   XM_030254200
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000143023   ⟸   ENSMUST00000198650
RefSeq Acc Id: ENSMUSP00000009058   ⟸   ENSMUST00000009058
RefSeq Acc Id: ENSMUSP00000143766   ⟸   ENSMUST00000199955
RefSeq Acc Id: ENSMUSP00000143612   ⟸   ENSMUST00000196580
RefSeq Acc Id: XP_036020766   ⟸   XM_036164873
- Peptide Label: isoform X2
- UniProtKB: Q3UMH0 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P06795-F1-model_v2 AlphaFold P06795 1-1276 view protein structure

Promoters
RGD ID:6836834
Promoter ID:MM_KWN:41338
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   MEF_B4
Transcripts:NM_011075,   UC008WKO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3658,797,944 - 8,798,444 (+)MPROMDB
RGD ID:6849692
Promoter ID:EP35016
Type:single initiation site
Name:MM_MDR1_B
Description:P-glycoprotein 1b
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Tissues & Cell Lines:adrenal gland, kidney, placenta
Experiment Methods:Nuclease protection
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3758,798,143 - 8,798,203EPD
MGSCv3658,798,143 - 8,798,203EPD
RGD ID:6885966
Promoter ID:EPDNEW_M6434
Type:multiple initiation site
Name:Abcb1b_1
Description:Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member1B , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3858,798,147 - 8,798,207EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97568 AgrOrtholog
Ensembl Genes ENSMUSG00000028970 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000009058 ENTREZGENE
  ENSMUST00000009058.10 UniProtKB/Swiss-Prot
  ENSMUST00000196580.5 UniProtKB/TrEMBL
  ENSMUST00000198650.2 UniProtKB/TrEMBL
  ENSMUST00000199955.5 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1560.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC1_TM_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC1_TM_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_transporter-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_transporter_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Type_I_exporter UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18669 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:97568 ENTREZGENE
NCBI Gene 18669 ENTREZGENE
PANTHER ABC TRANSPORTER B FAMILY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYCOBACTIN IMPORT ATP-BINDING/PERMEASE PROTEIN IRTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ABC_membrane UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_tran UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Abcb1b PhenoGen
PROSITE ABC_TM1F UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_TRANSPORTER_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_TRANSPORTER_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF90123 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JF49_MOUSE UniProtKB/TrEMBL
  A0A0G2JGL4_MOUSE UniProtKB/TrEMBL
  B2RUR3 ENTREZGENE, UniProtKB/TrEMBL
  MDR1B_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3UMH0 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-07-04 Abcb1b  ATP-binding cassette, sub-family B member 1B  Abcb1b  ATP-binding cassette, sub-family B (MDR/TAP), member 1B  Symbol and/or name change 5135510 APPROVED