Cd200 (CD200 molecule) - Rat Genome Database

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Gene: Cd200 (CD200 molecule) Mus musculus
Analyze
Symbol: Cd200
Name: CD200 molecule
RGD ID: 1332092
MGI Page MGI
Description: Predicted to enable protein binding activity involved in heterotypic cell-cell adhesion. Involved in negative regulation of cell population proliferation; negative regulation of macrophage activation; and negative regulation of neuroinflammatory response. Located in cell surface. Is expressed in several structures, including anterior naris; bone; metanephros; nervous system; and retina. Used to study autoimmune disease. Orthologous to human CD200 (CD200 molecule).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: antigen identified by monoclonal antibody MRC OX-2; CD200 antigen; Mox; Mox2; MRC OX-2 antigen; OX; OX-2 membrane glycoprotein; OX2
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391645,202,474 - 45,229,419 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1645,202,498 - 45,229,416 (-)EnsemblGRCm39 Ensembl
GRCm381645,382,111 - 45,409,060 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1645,382,135 - 45,409,053 (-)EnsemblGRCm38mm10GRCm38
MGSCv371645,382,248 - 45,409,166 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361645,301,440 - 45,328,223 (-)NCBIMGSCv36mm8
Celera1645,782,157 - 45,809,002 (-)NCBICelera
Cytogenetic Map16B5NCBI
cM Map1629.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
aconitine  (ISO)
alachlor  (ISO)
aldrin  (EXP)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
atrazine  (ISO)
bathocuproine disulfonic acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
bisphenol A  (EXP,ISO)
carbamazepine  (ISO)
CGP 52608  (ISO)
chrysene  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
corticosterone  (ISO)
crocidolite asbestos  (EXP)
dextran sulfate  (EXP)
dibenz[a,h]anthracene  (EXP)
diethylstilbestrol  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
ethanol  (ISO)
flavonoids  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
gentamycin  (ISO)
ionomycin  (ISO)
ketoconazole  (ISO)
lead(0)  (ISO)
melatonin  (EXP)
methimazole  (ISO)
methyl methanesulfonate  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
nickel atom  (ISO)
nickel subsulfide  (ISO)
nickel sulfate  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
panobinostat  (ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
phenylephrine  (ISO)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
progesterone  (EXP,ISO)
pyrrolidine dithiocarbamate  (ISO)
raloxifene  (ISO)
rotenone  (EXP,ISO)
SB 431542  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP)
tetraphene  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
tremolite asbestos  (EXP)
trichloroethene  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
vincristine  (ISO)
vorinostat  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9295026   PMID:9434094   PMID:9457671   PMID:10349636   PMID:10508520   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11099416   PMID:11217851   PMID:11477545   PMID:12072366  
PMID:12322892   PMID:12414514   PMID:12466851   PMID:12477932   PMID:12960329   PMID:14644999   PMID:14691545   PMID:15187158   PMID:15274657   PMID:15482475   PMID:15557172   PMID:15611236  
PMID:15684038   PMID:15699757   PMID:15946251   PMID:16081818   PMID:16141072   PMID:16141073   PMID:16354182   PMID:16365410   PMID:16530849   PMID:16602821   PMID:16718351   PMID:17600119  
PMID:17670977   PMID:17714785   PMID:17726108   PMID:18164423   PMID:18287559   PMID:18298594   PMID:18424714   PMID:18660812   PMID:18705840   PMID:18946351   PMID:19228924   PMID:19501645  
PMID:19587022   PMID:19656578   PMID:19953316   PMID:20200945   PMID:20662098   PMID:20735439   PMID:20833375   PMID:21165772   PMID:21206086   PMID:21267068   PMID:21281752   PMID:21669395  
PMID:21677750   PMID:21801836   PMID:21835925   PMID:21873635   PMID:22020332   PMID:22323214   PMID:22496920   PMID:22615569   PMID:22653796   PMID:22683854   PMID:22763785   PMID:22875025  
PMID:22975132   PMID:23178470   PMID:23236457   PMID:23337536   PMID:23345421   PMID:23602662   PMID:23603273   PMID:24142033   PMID:24388216   PMID:24639050   PMID:24897500   PMID:25263452  
PMID:25450061   PMID:25654642   PMID:26841120   PMID:27565350   PMID:27731341   PMID:27864635   PMID:28123029   PMID:28234914   PMID:28964716   PMID:29729356   PMID:30653571   PMID:30717437  
PMID:31202927   PMID:31277944   PMID:31444514   PMID:31790427   PMID:31835080   PMID:33067924   PMID:33846639   PMID:33953190   PMID:33975450   PMID:34069671   PMID:34183355   PMID:34321999  
PMID:34353112   PMID:34376651   PMID:34634761   PMID:34921782   PMID:37902837   PMID:37903272   PMID:38157992   PMID:38187761  


Genomics

Comparative Map Data
Cd200
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391645,202,474 - 45,229,419 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1645,202,498 - 45,229,416 (-)EnsemblGRCm39 Ensembl
GRCm381645,382,111 - 45,409,060 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1645,382,135 - 45,409,053 (-)EnsemblGRCm38mm10GRCm38
MGSCv371645,382,248 - 45,409,166 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361645,301,440 - 45,328,223 (-)NCBIMGSCv36mm8
Celera1645,782,157 - 45,809,002 (-)NCBICelera
Cytogenetic Map16B5NCBI
cM Map1629.53NCBI
CD200
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383112,332,573 - 112,362,812 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3112,332,347 - 112,362,812 (+)EnsemblGRCh38hg38GRCh38
GRCh373112,051,420 - 112,081,659 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363113,534,606 - 113,564,349 (+)NCBINCBI36Build 36hg18NCBI36
Celera3110,460,648 - 110,490,361 (+)NCBICelera
Cytogenetic Map3q13.2NCBI
HuRef3109,436,001 - 109,465,715 (+)NCBIHuRef
CHM1_13112,015,971 - 112,045,683 (+)NCBICHM1_1
T2T-CHM13v2.03115,053,635 - 115,083,861 (+)NCBIT2T-CHM13v2.0
Cd200
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81168,916,200 - 68,943,570 (+)NCBIGRCr8
mRatBN7.21155,410,166 - 55,437,527 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1155,410,196 - 55,501,648 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1164,224,976 - 64,251,219 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01156,886,834 - 56,913,080 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01155,959,450 - 55,986,668 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01160,371,617 - 60,398,450 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1160,371,684 - 60,403,196 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01164,474,114 - 64,501,029 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41156,946,504 - 56,974,256 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11157,004,092 - 57,031,845 (+)NCBI
Celera1154,978,287 - 55,004,105 (+)NCBICelera
Cytogenetic Map11q21NCBI
CD200
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22110,334,631 - 110,365,077 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13110,339,408 - 110,369,857 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03109,481,067 - 109,511,261 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13116,404,606 - 116,434,363 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3116,404,728 - 116,434,363 (+)Ensemblpanpan1.1panPan2
CD200
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13316,872,849 - 16,892,161 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3316,873,048 - 16,890,954 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3316,975,655 - 17,001,572 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03317,116,263 - 17,142,263 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3317,116,357 - 17,136,128 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13316,921,533 - 16,947,516 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03316,968,748 - 16,994,765 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03317,517,917 - 17,543,967 (+)NCBIUU_Cfam_GSD_1.0
Cd200
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602137,487,118 - 137,513,588 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365368,262 - 35,197 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365368,337 - 33,954 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CD200
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13147,465,863 - 147,486,141 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113147,465,858 - 147,485,818 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213157,173,775 - 157,193,532 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CD200
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12268,429,544 - 68,459,711 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2268,426,459 - 68,459,616 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604198,009,245 - 98,038,967 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cd200
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473136,223,673 - 36,251,542 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473136,224,360 - 36,251,656 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cd200
1020 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2016
Count of miRNA genes:696
Interacting mature miRNAs:868
Transcripts:ENSMUST00000023341, ENSMUST00000163230, ENSMUST00000165910, ENSMUST00000166512, ENSMUST00000166630, ENSMUST00000167355, ENSMUST00000167552, ENSMUST00000171328, ENSMUST00000171855, ENSMUST00000172091, ENSMUST00000172297
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412263Gvhd6_mgraft-versus host disease 6 (mouse)Not determined163606085745511148Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162879281362792952Mouse
26884416Bzwq5_mbi-zygomatic width QTL 5, 5 week (mouse)163732036284696888Mouse
1301070Cypr1_mcytokine production 1 (mouse)Not determined163231279566312933Mouse
1301086Lprm5_mlymphoproliferation modifier 5 (mouse)Not determined161184882445848923Mouse
4142236Pstc4_mperiosteal circumference 4 (mouse)Not determined161552290949523112Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
27226768Tibl9_mtibia length 9, 5 week (mouse)16331786451420363Mouse
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
1301841Lrnx9_mlearning-contextual 9 (mouse)Not determined161222536046225471Mouse
4141212Imraq3_mimmune response to AAV2 QTL 3 (mouse)Not determined164438335078383506Mouse
10045614Rapop6_mradiation-induced apoptosis 6 (mouse)Not determined161480292148803032Mouse
1301138Pcd4ts3_mp-glycoprotein positive CD4 T cell subset 3 (mouse)Not determined164059392374594076Mouse
11059559Lmr12a_mleishmaniasis resistance 12a (mouse)162879281362792952Mouse
1301719Remslp3_mrapid eye movement sleep 3 (mouse)Not determined164438335078383506Mouse
1357778Diobq_mdiet-induced obesity QTL (mouse)Not determined164219781782331174Mouse
11049571Lmr12c_mleishmaniasis resistance 12c (mouse)162879281362792952Mouse
4142112Skts-fp3_mskin tumor susceptibility in FVB and PWK 3 (mouse)Not determined164005388172924385Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16654297965466552Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162001932985600826Mouse
4141179Ipng3_mimprinted postnatal growth 3 (mouse)Not determined2277525257594076Mouse
11522747Eae41_mexperimental allergic encephalomyelitis susceptibility 41 (mouse)164039913478015472Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16331786464620363Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1300534Bmd15_mbone mineral density 15 (mouse)Not determined162193838355938574Mouse
4142187Arrd3_mage-related retinal degeneration 3 (mouse)Not determined3252290965466552Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001358443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_189160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017316890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC117686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF004023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF029216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF231126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN665640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000023341   ⟹   ENSMUSP00000023341
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,202,546 - 45,229,238 (-)Ensembl
GRCm38.p6 Ensembl1645,382,183 - 45,408,875 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163230   ⟹   ENSMUSP00000130518
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,202,498 - 45,229,416 (-)Ensembl
GRCm38.p6 Ensembl1645,382,135 - 45,409,053 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165910
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,215,189 - 45,229,404 (-)Ensembl
GRCm38.p6 Ensembl1645,394,826 - 45,409,041 (-)Ensembl
RefSeq Acc Id: ENSMUST00000166512   ⟹   ENSMUSP00000129541
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,212,608 - 45,229,276 (-)Ensembl
GRCm38.p6 Ensembl1645,392,245 - 45,408,913 (-)Ensembl
RefSeq Acc Id: ENSMUST00000166630
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,217,332 - 45,229,380 (-)Ensembl
GRCm38.p6 Ensembl1645,396,969 - 45,409,017 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167355   ⟹   ENSMUSP00000132506
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,212,608 - 45,220,675 (-)Ensembl
GRCm38.p6 Ensembl1645,392,245 - 45,400,312 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167552
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,219,934 - 45,229,227 (-)Ensembl
GRCm38.p6 Ensembl1645,399,571 - 45,408,864 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171328
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,203,647 - 45,229,335 (-)Ensembl
GRCm38.p6 Ensembl1645,383,284 - 45,408,972 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,214,961 - 45,229,386 (-)Ensembl
GRCm38.p6 Ensembl1645,394,598 - 45,409,023 (-)Ensembl
RefSeq Acc Id: ENSMUST00000172091
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,227,557 - 45,229,381 (-)Ensembl
GRCm38.p6 Ensembl1645,407,194 - 45,409,018 (-)Ensembl
RefSeq Acc Id: ENSMUST00000172297
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1645,220,656 - 45,229,370 (-)Ensembl
GRCm38.p6 Ensembl1645,400,293 - 45,409,007 (-)Ensembl
RefSeq Acc Id: NM_001358443   ⟹   NP_001345372
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391645,202,498 - 45,229,416 (-)NCBI
GRCm381645,382,135 - 45,409,053 (-)NCBI
Sequence:
RefSeq Acc Id: NM_010818   ⟹   NP_034948
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391645,202,498 - 45,229,416 (-)NCBI
GRCm381645,382,135 - 45,409,053 (-)NCBI
MGSCv371645,382,248 - 45,409,166 (-)RGD
Celera1645,782,157 - 45,809,002 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_189160
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391645,202,490 - 45,229,390 (-)NCBI
RefSeq Acc Id: XM_017316890   ⟹   XP_017172379
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391645,202,474 - 45,229,419 (-)NCBI
GRCm381645,382,111 - 45,409,060 (-)NCBI
Sequence:
RefSeq Acc Id: NP_034948   ⟸   NM_010818
- Peptide Label: isoform 1 precursor
- UniProtKB: Q9JHD5 (UniProtKB/Swiss-Prot),   O54901 (UniProtKB/Swiss-Prot),   O54816 (UniProtKB/Swiss-Prot),   Q80VX2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017172379   ⟸   XM_017316890
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001345372   ⟸   NM_001358443
- Peptide Label: isoform 2
RefSeq Acc Id: ENSMUSP00000130518   ⟸   ENSMUST00000163230
RefSeq Acc Id: ENSMUSP00000129541   ⟸   ENSMUST00000166512
RefSeq Acc Id: ENSMUSP00000132506   ⟸   ENSMUST00000167355
RefSeq Acc Id: ENSMUSP00000023341   ⟸   ENSMUST00000023341
Protein Domains
Ig-like   Ig-like C2-type   Ig-like V-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O54901-F1-model_v2 AlphaFold O54901 1-278 view protein structure

Promoters
RGD ID:6826890
Promoter ID:MM_KWN:21105
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:ENSMUST00000023341
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361645,401,551 - 45,402,051 (-)MPROMDB
RGD ID:6826910
Promoter ID:MM_KWN:21106
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   Spleen
Transcripts:AK131640_2300009N04RIK,   NM_010818,   UC007ZIN.1,   UC007ZIO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361645,408,351 - 45,408,902 (-)MPROMDB
RGD ID:8686284
Promoter ID:EPDNEW_M21173
Type:initiation region
Name:Cd200_1
Description:Mus musculus CD200 antigen , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381645,409,023 - 45,409,083EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1196990 AgrOrtholog
Ensembl Genes ENSMUSG00000022661 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000023341.15 UniProtKB/TrEMBL
  ENSMUST00000163230 ENTREZGENE
  ENSMUST00000163230.8 UniProtKB/TrEMBL
  ENSMUST00000166512.2 UniProtKB/TrEMBL
  ENSMUST00000167355.8 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CD200 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OX2G-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1196990 ENTREZGENE
NCBI Gene 17470 ENTREZGENE
PANTHER OX-2 MEMBRANE GLYCOPROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR46841:SF3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PF00047 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cd200 PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IGv UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E9PZI9_MOUSE UniProtKB/TrEMBL
  E9QMY1_MOUSE UniProtKB/TrEMBL
  O54816 ENTREZGENE
  O54901 ENTREZGENE, UniProtKB/Swiss-Prot
  Q05D16_MOUSE UniProtKB/TrEMBL
  Q80VX2 ENTREZGENE, UniProtKB/TrEMBL
  Q9JHD5 ENTREZGENE
UniProt Secondary O54816 UniProtKB/Swiss-Prot
  Q9JHD5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-07-05 Cd200  CD200 molecule  Cd200  CD200 antigen  Symbol and/or name change 5135510 APPROVED