CDK18 (cyclin dependent kinase 18) - Rat Genome Database

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Gene: CDK18 (cyclin dependent kinase 18) Homo sapiens
Analyze
Symbol: CDK18
Name: cyclin dependent kinase 18
RGD ID: 1319906
HGNC Page HGNC:8751
Description: Predicted to enable cyclin-dependent protein serine/threonine kinase activity. Predicted to be involved in phosphorylation and regulation of cell cycle. Predicted to be active in cytoplasm and nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cell division protein kinase 18; cyclin-dependent kinase 18; PCTAIRE; PCTAIRE protein kinase 3; PCTAIRE-motif protein kinase 3; PCTAIRE3; PCTK3; serine/threonine-protein kinase PCTAIRE-3
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381205,504,669 - 205,532,790 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1205,504,596 - 205,532,793 (+)EnsemblGRCh38hg38GRCh38
GRCh371205,473,797 - 205,501,918 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361203,740,350 - 203,768,541 (+)NCBINCBI36Build 36hg18NCBI36
Celera1178,608,860 - 178,637,096 (+)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1176,639,088 - 176,667,323 (+)NCBIHuRef
CHM1_11206,896,957 - 206,925,197 (+)NCBICHM1_1
T2T-CHM13v2.01204,769,067 - 204,797,187 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cellular_component  (ND)
cytoplasm  (IBA,IEA)
nucleus  (IBA,IEA)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1437147   PMID:1639063   PMID:8088790   PMID:8889548   PMID:12477932   PMID:14702039   PMID:15019984   PMID:15161933   PMID:15489334   PMID:16091426   PMID:16189514   PMID:16341674  
PMID:16344560   PMID:16710414   PMID:16766195   PMID:17192257   PMID:17979178   PMID:19460752   PMID:19884882   PMID:21832049   PMID:21873635   PMID:22939624   PMID:23382691   PMID:23444366  
PMID:23455922   PMID:23602568   PMID:24255178   PMID:24823311   PMID:25416956   PMID:26186194   PMID:26354767   PMID:26496610   PMID:26885753   PMID:27173435   PMID:27382066   PMID:28514442  
PMID:28533407   PMID:29845934   PMID:30773093   PMID:31266951   PMID:31540324   PMID:32164329   PMID:32296183   PMID:32707033   PMID:33957083   PMID:33961781   PMID:35271311   PMID:36215168  
PMID:36602125   PMID:36880596   PMID:36931259  


Genomics

Comparative Map Data
CDK18
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381205,504,669 - 205,532,790 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1205,504,596 - 205,532,793 (+)EnsemblGRCh38hg38GRCh38
GRCh371205,473,797 - 205,501,918 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361203,740,350 - 203,768,541 (+)NCBINCBI36Build 36hg18NCBI36
Celera1178,608,860 - 178,637,096 (+)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1176,639,088 - 176,667,323 (+)NCBIHuRef
CHM1_11206,896,957 - 206,925,197 (+)NCBICHM1_1
T2T-CHM13v2.01204,769,067 - 204,797,187 (+)NCBIT2T-CHM13v2.0
Cdk18
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,041,285 - 132,067,433 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,039,975 - 132,067,422 (-)EnsemblGRCm39 Ensembl
GRCm381132,113,547 - 132,139,698 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,112,237 - 132,139,684 (-)EnsemblGRCm38mm10GRCm38
MGSCv371134,010,124 - 134,036,262 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361133,941,206 - 133,967,230 (-)NCBIMGSCv36mm8
Celera1134,717,874 - 134,746,292 (-)NCBICelera
Cytogenetic Map1E4NCBI
cM Map157.24NCBI
Cdk18
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81346,107,763 - 46,140,705 (-)NCBIGRCr8
mRatBN7.21343,555,597 - 43,582,210 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1343,556,748 - 43,588,525 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1346,164,010 - 46,172,223 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01347,452,154 - 47,460,367 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01344,712,855 - 44,721,069 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01348,893,525 - 48,926,673 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1348,893,412 - 48,927,483 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01353,963,482 - 53,996,384 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41344,996,447 - 45,004,813 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11345,010,140 - 45,052,495 (-)NCBI
Celera1343,894,168 - 43,902,442 (-)NCBICelera
Cytogenetic Map13q13NCBI
Cdk18
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540641,228,678 - 41,252,543 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540641,228,802 - 41,256,413 (+)NCBIChiLan1.0ChiLan1.0
CDK18
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2143,836,989 - 43,865,185 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1143,802,241 - 43,830,451 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01181,113,560 - 181,141,758 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11185,399,156 - 185,427,631 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1185,399,162 - 185,427,631 (+)Ensemblpanpan1.1panPan2
CDK18
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1381,978,128 - 2,005,319 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl381,990,061 - 2,002,321 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha382,069,268 - 2,096,515 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0381,972,641 - 1,999,890 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl381,974,237 - 1,999,888 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1381,970,139 - 1,994,040 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0382,361,384 - 2,385,523 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0382,559,737 - 2,587,029 (+)NCBIUU_Cfam_GSD_1.0
Cdk18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934469,651,482 - 69,678,141 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365576,891,806 - 6,918,429 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365576,891,764 - 6,918,423 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDK18
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl966,175,678 - 66,202,795 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1966,175,539 - 66,202,799 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2972,427,470 - 72,448,210 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CDK18
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12523,809,633 - 23,838,350 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2523,809,352 - 23,838,345 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605524,508,636 - 24,537,341 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdk18
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248075,684,661 - 5,691,456 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248075,683,454 - 5,706,823 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CDK18
24 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q31.1-42.11(chr1:187143981-224299417)x3 copy number gain See cases [RCV000051857] Chr1:187143981..224299417 [GRCh38]
Chr1:187113113..224487119 [GRCh37]
Chr1:185379736..222553742 [NCBI36]
Chr1:1q31.1-42.11
pathogenic
GRCh38/hg38 1q32.1-32.2(chr1:204990129-210220258)x3 copy number gain See cases [RCV000051859] Chr1:204990129..210220258 [GRCh38]
Chr1:204959257..210572305 [GRCh37]
Chr1:203225880..208638928 [NCBI36]
Chr1:1q32.1-32.2
pathogenic
GRCh38/hg38 1q32.1-42.12(chr1:204764914-225408698)x3 copy number gain See cases [RCV000142054] Chr1:204764914..225408698 [GRCh38]
Chr1:204734042..225596400 [GRCh37]
Chr1:203000665..223663023 [NCBI36]
Chr1:1q32.1-42.12
pathogenic
GRCh37/hg19 1q31.3-42.13(chr1:197811907-228997888)x3 copy number gain See cases [RCV000240137] Chr1:197811907..228997888 [GRCh37]
Chr1:1q31.3-42.13
pathogenic
NM_212502.3(CDK18):c.1100G>A (p.Gly367Asp) single nucleotide variant Inborn genetic diseases [RCV003268589] Chr1:205529351 [GRCh38]
Chr1:205498479 [GRCh37]
Chr1:1q32.1
uncertain significance
GRCh37/hg19 1q31.3-44(chr1:195483439-249213000)x3 copy number gain See cases [RCV000449172] Chr1:195483439..249213000 [GRCh37]
Chr1:1q31.3-44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1q32.1-32.3(chr1:204682513-212815646) copy number loss Global developmental delay [RCV000626524] Chr1:204682513..212815646 [GRCh37]
Chr1:1q32.1-32.3
pathogenic
NM_212502.3(CDK18):c.216G>C (p.Gln72His) single nucleotide variant Inborn genetic diseases [RCV003241795] Chr1:205523568 [GRCh38]
Chr1:205492696 [GRCh37]
Chr1:1q32.1
uncertain significance
GRCh37/hg19 1q32.1(chr1:205364836-205697334)x3 copy number gain not provided [RCV000684690] Chr1:205364836..205697334 [GRCh37]
Chr1:1q32.1
uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44
pathogenic
NC_000001.11:g.(?_204033173)_(208209798_?)del deletion Autism [RCV000754138] Chr1:204033173..208209798 [GRCh38]
Chr1:1q32.1-32.2
likely pathogenic
GRCh37/hg19 1q25.3-41(chr1:185644663-221698833)x3 copy number gain not provided [RCV000749265] Chr1:185644663..221698833 [GRCh37]
Chr1:1q25.3-41
pathogenic
GRCh37/hg19 1q25.3-44(chr1:182388773-249111240)x3 copy number gain not provided [RCV000845852] Chr1:182388773..249111240 [GRCh37]
Chr1:1q25.3-44
pathogenic
GRCh37/hg19 1q32.1-44(chr1:204045948-249218992)x3 copy number gain See cases [RCV001007407] Chr1:204045948..249218992 [GRCh37]
Chr1:1q32.1-44
pathogenic
GRCh37/hg19 1q31.3-32.2(chr1:194356425-210988710)x3 copy number gain not provided [RCV001249273] Chr1:194356425..210988710 [GRCh37]
Chr1:1q31.3-32.2
not provided
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44
uncertain significance
NM_212502.3(CDK18):c.1004C>T (p.Ala335Val) single nucleotide variant Inborn genetic diseases [RCV003295517] Chr1:205529028 [GRCh38]
Chr1:205498156 [GRCh37]
Chr1:1q32.1
uncertain significance
NC_000001.10:g.(?_200522516)_(206945780_?)dup duplication Epilepsy, familial adult myoclonic, 5 [RCV003116306] Chr1:200522516..206945780 [GRCh37]
Chr1:1q32.1
uncertain significance
NC_000001.10:g.(?_200522516)_(208391267_?)dup duplication Hypokalemic periodic paralysis, type 1 [RCV003119239]|not provided [RCV003119240] Chr1:200522516..208391267 [GRCh37]
Chr1:1q32.1-32.2
uncertain significance|no classifications from unflagged records
GRCh37/hg19 1q31.3-44(chr1:197867914-249224684)x3 copy number gain See cases [RCV002287837] Chr1:197867914..249224684 [GRCh37]
Chr1:1q31.3-44
pathogenic
NM_212502.3(CDK18):c.821A>G (p.Asn274Ser) single nucleotide variant Inborn genetic diseases [RCV003303827] Chr1:205527885 [GRCh38]
Chr1:205497013 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.376C>T (p.Arg126Cys) single nucleotide variant Inborn genetic diseases [RCV002778282] Chr1:205524334 [GRCh38]
Chr1:205493462 [GRCh37]
Chr1:1q32.1
uncertain significance
GRCh37/hg19 1q25.3-32.3(chr1:181453460-213107248)x3 copy number gain not provided [RCV002475637] Chr1:181453460..213107248 [GRCh37]
Chr1:1q25.3-32.3
pathogenic
NM_212502.3(CDK18):c.310C>T (p.Arg104Cys) single nucleotide variant Inborn genetic diseases [RCV002749109] Chr1:205524268 [GRCh38]
Chr1:205493396 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.828G>C (p.Arg276Ser) single nucleotide variant Inborn genetic diseases [RCV002991902] Chr1:205527892 [GRCh38]
Chr1:205497020 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.693C>A (p.Asp231Glu) single nucleotide variant Inborn genetic diseases [RCV002902580] Chr1:205526801 [GRCh38]
Chr1:205495929 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.1394G>A (p.Arg465Gln) single nucleotide variant Inborn genetic diseases [RCV002684317] Chr1:205531347 [GRCh38]
Chr1:205500475 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.273+26G>A single nucleotide variant Inborn genetic diseases [RCV002969111] Chr1:205523651 [GRCh38]
Chr1:205492779 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.35G>A (p.Arg12His) single nucleotide variant Inborn genetic diseases [RCV002860705] Chr1:205523202 [GRCh38]
Chr1:205492330 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.241C>T (p.Arg81Trp) single nucleotide variant Inborn genetic diseases [RCV002924249] Chr1:205523593 [GRCh38]
Chr1:205492721 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.273+44C>T single nucleotide variant Inborn genetic diseases [RCV002978095] Chr1:205523669 [GRCh38]
Chr1:205492797 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.1010G>A (p.Gly337Glu) single nucleotide variant Inborn genetic diseases [RCV003006627] Chr1:205529034 [GRCh38]
Chr1:205498162 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.245G>A (p.Arg82Gln) single nucleotide variant Inborn genetic diseases [RCV002787765] Chr1:205523597 [GRCh38]
Chr1:205492725 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.554G>A (p.Cys185Tyr) single nucleotide variant Inborn genetic diseases [RCV002874299] Chr1:205526162 [GRCh38]
Chr1:205495290 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.1232A>C (p.Lys411Thr) single nucleotide variant Inborn genetic diseases [RCV002717457] Chr1:205530269 [GRCh38]
Chr1:205499397 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.1151C>G (p.Pro384Arg) single nucleotide variant Inborn genetic diseases [RCV002920735] Chr1:205529402 [GRCh38]
Chr1:205498530 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.407T>C (p.Ile136Thr) single nucleotide variant Inborn genetic diseases [RCV003180261] Chr1:205525146 [GRCh38]
Chr1:205494274 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.751C>T (p.Arg251Trp) single nucleotide variant Inborn genetic diseases [RCV003183917] Chr1:205527815 [GRCh38]
Chr1:205496943 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.1277G>A (p.Arg426Gln) single nucleotide variant Inborn genetic diseases [RCV003310459] Chr1:205530314 [GRCh38]
Chr1:205499442 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.55C>T (p.Arg19Cys) single nucleotide variant Inborn genetic diseases [RCV003341409] Chr1:205523222 [GRCh38]
Chr1:205492350 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.484C>T (p.Arg162Cys) single nucleotide variant Inborn genetic diseases [RCV003370240] Chr1:205526092 [GRCh38]
Chr1:205495220 [GRCh37]
Chr1:1q32.1
uncertain significance
NM_212502.3(CDK18):c.497C>T (p.Thr166Met) single nucleotide variant not provided [RCV003414725] Chr1:205526105 [GRCh38]
Chr1:205495233 [GRCh37]
Chr1:1q32.1
likely benign
NM_212502.3(CDK18):c.759C>T (p.Leu253=) single nucleotide variant not provided [RCV003414726] Chr1:205527823 [GRCh38]
Chr1:205496951 [GRCh37]
Chr1:1q32.1
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:10503
Count of miRNA genes:1186
Interacting mature miRNAs:1540
Transcripts:ENST00000360066, ENST00000419301, ENST00000429964, ENST00000443813, ENST00000459862, ENST00000462976, ENST00000468954, ENST00000476153, ENST00000478560, ENST00000484080, ENST00000489617, ENST00000504162, ENST00000504648, ENST00000505932, ENST00000506215, ENST00000506489, ENST00000506784, ENST00000507067, ENST00000507240, ENST00000509056, ENST00000512008, ENST00000512922, ENST00000515494, ENST00000515514
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH80187  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371205,501,652 - 205,501,885UniSTSGRCh37
Build 361203,768,275 - 203,768,508RGDNCBI36
Celera1178,636,827 - 178,637,060RGD
Cytogenetic Map1q31-q32UniSTS
HuRef1176,667,054 - 176,667,287UniSTS
GeneMap99-GB4 RH Map1680.74UniSTS
PCTK3_8526  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371205,501,070 - 205,501,959UniSTSGRCh37
Build 361203,767,693 - 203,768,582RGDNCBI36
Celera1178,636,245 - 178,637,134RGD
HuRef1176,666,472 - 176,667,361UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 4
Medium 1416 2113 1099 204 371 88 1178 650 2997 313 810 1342 123 176 895 2
Low 1016 521 615 412 951 369 3161 1529 714 102 632 256 50 1 1028 1885 2 1
Below cutoff 1 354 12 7 588 8 14 12 15 4 14 14 1 8 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_002596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_212502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_212503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011509602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017001423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054336917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054336918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054336919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054336920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054336921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054336922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054336923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001737212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001737213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002956776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_426779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_426780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_426781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_426782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_426784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_921822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB209307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK126879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL161977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL357131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU130437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY353237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY353238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY353239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY353240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM695474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM772779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT007299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU165355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC381358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF455139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X66362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000360066   ⟹   ENSP00000353176
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,599 - 205,532,793 (+)Ensembl
RefSeq Acc Id: ENST00000419301   ⟹   ENSP00000391324
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,802 - 205,527,825 (+)Ensembl
RefSeq Acc Id: ENST00000429964   ⟹   ENSP00000399082
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,669 - 205,532,790 (+)Ensembl
RefSeq Acc Id: ENST00000443813   ⟹   ENSP00000397831
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,705 - 205,525,190 (+)Ensembl
RefSeq Acc Id: ENST00000459862
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,530,313 - 205,531,666 (+)Ensembl
RefSeq Acc Id: ENST00000462976   ⟹   ENSP00000422842
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,688 - 205,524,355 (+)Ensembl
RefSeq Acc Id: ENST00000468954
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,528,055 - 205,529,579 (+)Ensembl
RefSeq Acc Id: ENST00000476153
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,523,554 - 205,527,263 (+)Ensembl
RefSeq Acc Id: ENST00000478560   ⟹   ENSP00000423408
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,694 - 205,527,873 (+)Ensembl
RefSeq Acc Id: ENST00000484080
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,529,201 - 205,531,942 (+)Ensembl
RefSeq Acc Id: ENST00000489617
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,527,410 - 205,532,793 (+)Ensembl
RefSeq Acc Id: ENST00000504162
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,528,131 - 205,529,516 (+)Ensembl
RefSeq Acc Id: ENST00000504648   ⟹   ENSP00000425036
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,597 - 205,531,762 (+)Ensembl
RefSeq Acc Id: ENST00000505932
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,523,560 - 205,530,016 (+)Ensembl
RefSeq Acc Id: ENST00000506215   ⟹   ENSP00000426368
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,749 - 205,524,329 (+)Ensembl
RefSeq Acc Id: ENST00000506489
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,527,828 - 205,528,994 (+)Ensembl
RefSeq Acc Id: ENST00000506784   ⟹   ENSP00000423665
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,598 - 205,531,786 (+)Ensembl
RefSeq Acc Id: ENST00000507067
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,659 - 205,523,686 (+)Ensembl
RefSeq Acc Id: ENST00000507240
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,516,817 - 205,523,279 (+)Ensembl
RefSeq Acc Id: ENST00000512008
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,529,194 - 205,531,404 (+)Ensembl
RefSeq Acc Id: ENST00000512922   ⟹   ENSP00000422470
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,504,596 - 205,526,835 (+)Ensembl
RefSeq Acc Id: ENST00000515494   ⟹   ENSP00000425177
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,522,429 - 205,532,785 (+)Ensembl
RefSeq Acc Id: ENST00000515514
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1205,529,219 - 205,531,552 (+)Ensembl
RefSeq Acc Id: NM_002596   ⟹   NP_002587
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,504,669 - 205,532,790 (+)NCBI
GRCh371205,473,684 - 205,501,921 (+)RGD
GRCh371205,473,684 - 205,501,921 (+)NCBI
Build 361203,740,350 - 203,768,541 (+)NCBI Archive
Celera1178,608,860 - 178,637,096 (+)RGD
HuRef1176,639,088 - 176,667,323 (+)ENTREZGENE
CHM1_11206,896,957 - 206,925,197 (+)NCBI
T2T-CHM13v2.01204,769,067 - 204,797,187 (+)NCBI
Sequence:
RefSeq Acc Id: NM_212502   ⟹   NP_997667
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,504,669 - 205,532,790 (+)NCBI
GRCh371205,473,684 - 205,501,921 (+)RGD
GRCh371205,473,684 - 205,501,921 (+)NCBI
Build 361203,740,350 - 203,768,541 (+)NCBI Archive
Celera1178,608,860 - 178,637,096 (+)RGD
HuRef1176,639,088 - 176,667,323 (+)ENTREZGENE
CHM1_11206,896,957 - 206,925,197 (+)NCBI
T2T-CHM13v2.01204,769,067 - 204,797,187 (+)NCBI
Sequence:
RefSeq Acc Id: NM_212503   ⟹   NP_997668
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,504,669 - 205,532,790 (+)NCBI
GRCh371205,473,684 - 205,501,921 (+)RGD
GRCh371205,473,684 - 205,501,921 (+)NCBI
Build 361203,740,350 - 203,768,541 (+)NCBI Archive
Celera1178,608,860 - 178,637,096 (+)RGD
HuRef1176,639,088 - 176,667,323 (+)ENTREZGENE
CHM1_11206,896,957 - 206,925,197 (+)NCBI
T2T-CHM13v2.01204,769,067 - 204,797,187 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011509602   ⟹   XP_011507904
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,512,317 - 205,532,790 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017001423   ⟹   XP_016856912
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,512,317 - 205,532,790 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047422202   ⟹   XP_047278158
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,512,317 - 205,530,252 (+)NCBI
RefSeq Acc Id: XM_047422203   ⟹   XP_047278159
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,512,317 - 205,530,252 (+)NCBI
RefSeq Acc Id: XM_047422207   ⟹   XP_047278163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,504,669 - 205,530,252 (+)NCBI
RefSeq Acc Id: XM_047422209   ⟹   XP_047278165
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,512,317 - 205,530,252 (+)NCBI
RefSeq Acc Id: XM_047422210   ⟹   XP_047278166
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,512,317 - 205,530,252 (+)NCBI
RefSeq Acc Id: XM_047422212   ⟹   XP_047278168
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,504,669 - 205,530,252 (+)NCBI
RefSeq Acc Id: XM_054336917   ⟹   XP_054192892
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01204,776,421 - 204,794,649 (+)NCBI
RefSeq Acc Id: XM_054336918   ⟹   XP_054192893
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01204,776,428 - 204,797,187 (+)NCBI
RefSeq Acc Id: XM_054336919   ⟹   XP_054192894
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01204,776,424 - 204,794,649 (+)NCBI
RefSeq Acc Id: XM_054336920   ⟹   XP_054192895
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01204,776,432 - 204,797,187 (+)NCBI
RefSeq Acc Id: XM_054336921   ⟹   XP_054192896
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01204,769,067 - 204,794,649 (+)NCBI
RefSeq Acc Id: XM_054336922   ⟹   XP_054192897
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01204,776,837 - 204,794,649 (+)NCBI
RefSeq Acc Id: XM_054336923   ⟹   XP_054192898
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01204,769,067 - 204,794,649 (+)NCBI
Protein Sequences
Protein RefSeqs NP_002587 (Get FASTA)   NCBI Sequence Viewer  
  NP_997667 (Get FASTA)   NCBI Sequence Viewer  
  NP_997668 (Get FASTA)   NCBI Sequence Viewer  
  XP_011507904 (Get FASTA)   NCBI Sequence Viewer  
  XP_016856912 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278158 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278159 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278163 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278165 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278166 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278168 (Get FASTA)   NCBI Sequence Viewer  
  XP_054192892 (Get FASTA)   NCBI Sequence Viewer  
  XP_054192893 (Get FASTA)   NCBI Sequence Viewer  
  XP_054192894 (Get FASTA)   NCBI Sequence Viewer  
  XP_054192895 (Get FASTA)   NCBI Sequence Viewer  
  XP_054192896 (Get FASTA)   NCBI Sequence Viewer  
  XP_054192897 (Get FASTA)   NCBI Sequence Viewer  
  XP_054192898 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH00281 (Get FASTA)   NCBI Sequence Viewer  
  AAH11526 (Get FASTA)   NCBI Sequence Viewer  
  AAH40529 (Get FASTA)   NCBI Sequence Viewer  
  AAP35963 (Get FASTA)   NCBI Sequence Viewer  
  AAR13065 (Get FASTA)   NCBI Sequence Viewer  
  AAR13066 (Get FASTA)   NCBI Sequence Viewer  
  BAD92544 (Get FASTA)   NCBI Sequence Viewer  
  BAG54388 (Get FASTA)   NCBI Sequence Viewer  
  BAG57176 (Get FASTA)   NCBI Sequence Viewer  
  BAG58258 (Get FASTA)   NCBI Sequence Viewer  
  BAG58521 (Get FASTA)   NCBI Sequence Viewer  
  BAG59015 (Get FASTA)   NCBI Sequence Viewer  
  CAA47005 (Get FASTA)   NCBI Sequence Viewer  
  EAW91559 (Get FASTA)   NCBI Sequence Viewer  
  EAW91560 (Get FASTA)   NCBI Sequence Viewer  
  EAW91561 (Get FASTA)   NCBI Sequence Viewer  
  EAW91562 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000353176
  ENSP00000353176.2
  ENSP00000391324.1
  ENSP00000397831.2
  ENSP00000399082
  ENSP00000399082.2
  ENSP00000423665
  ENSP00000423665.1
GenBank Protein Q07002 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_002587   ⟸   NM_002596
- Peptide Label: isoform b
- UniProtKB: Q6V3A3 (UniProtKB/Swiss-Prot),   Q6V3A2 (UniProtKB/Swiss-Prot),   Q5VXQ2 (UniProtKB/Swiss-Prot),   Q96F90 (UniProtKB/Swiss-Prot),   Q07002 (UniProtKB/Swiss-Prot),   B4DK03 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_997667   ⟸   NM_212502
- Peptide Label: isoform b
- UniProtKB: Q6V3A3 (UniProtKB/Swiss-Prot),   Q6V3A2 (UniProtKB/Swiss-Prot),   Q5VXQ2 (UniProtKB/Swiss-Prot),   Q96F90 (UniProtKB/Swiss-Prot),   Q07002 (UniProtKB/Swiss-Prot),   B4DK03 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_997668   ⟸   NM_212503
- Peptide Label: isoform a
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011507904   ⟸   XM_011509602
- Peptide Label: isoform X4
- UniProtKB: Q6V3A3 (UniProtKB/Swiss-Prot),   Q6V3A2 (UniProtKB/Swiss-Prot),   Q5VXQ2 (UniProtKB/Swiss-Prot),   Q07002 (UniProtKB/Swiss-Prot),   Q96F90 (UniProtKB/Swiss-Prot),   B4DK03 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016856912   ⟸   XM_017001423
- Peptide Label: isoform X2
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000422842   ⟸   ENST00000462976
RefSeq Acc Id: ENSP00000423408   ⟸   ENST00000478560
RefSeq Acc Id: ENSP00000425036   ⟸   ENST00000504648
RefSeq Acc Id: ENSP00000353176   ⟸   ENST00000360066
RefSeq Acc Id: ENSP00000423665   ⟸   ENST00000506784
RefSeq Acc Id: ENSP00000426368   ⟸   ENST00000506215
RefSeq Acc Id: ENSP00000399082   ⟸   ENST00000429964
RefSeq Acc Id: ENSP00000397831   ⟸   ENST00000443813
RefSeq Acc Id: ENSP00000391324   ⟸   ENST00000419301
RefSeq Acc Id: ENSP00000422470   ⟸   ENST00000512922
RefSeq Acc Id: ENSP00000425177   ⟸   ENST00000515494
RefSeq Acc Id: XP_047278163   ⟸   XM_047422207
- Peptide Label: isoform X1
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278168   ⟸   XM_047422212
- Peptide Label: isoform X3
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278165   ⟸   XM_047422209
- Peptide Label: isoform X1
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278166   ⟸   XM_047422210
- Peptide Label: isoform X1
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278158   ⟸   XM_047422202
- Peptide Label: isoform X1
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278159   ⟸   XM_047422203
- Peptide Label: isoform X3
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054192896   ⟸   XM_054336921
- Peptide Label: isoform X1
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054192898   ⟸   XM_054336923
- Peptide Label: isoform X3
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054192892   ⟸   XM_054336917
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054192894   ⟸   XM_054336919
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054192893   ⟸   XM_054336918
- Peptide Label: isoform X6
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054192895   ⟸   XM_054336920
- Peptide Label: isoform X8
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054192897   ⟸   XM_054336922
- Peptide Label: isoform X1
- UniProtKB: B4DK03 (UniProtKB/TrEMBL)
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q07002-F1-model_v2 AlphaFold Q07002 1-474 view protein structure

Promoters
RGD ID:6784923
Promoter ID:HG_KWN:7008
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   NB4
Transcripts:ENST00000360066,   NM_212502,   NM_212503,   OTTHUMT00000090409,   OTTHUMT00000090410,   OTTHUMT00000090411,   OTTHUMT00000090412,   OTTHUMT00000090413,   UC009XBK.1,   UC009XBL.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361203,740,221 - 203,740,721 (+)MPROMDB
RGD ID:6786223
Promoter ID:HG_KWN:7009
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:OTTHUMT00000090414,   UC001HCS.1,   UC009XBM.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361203,757,716 - 203,758,216 (+)MPROMDB
RGD ID:6786228
Promoter ID:HG_KWN:7011
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell
Transcripts:UC001HCT.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361203,764,616 - 203,765,116 (+)MPROMDB
RGD ID:6858732
Promoter ID:EPDNEW_H2531
Type:initiation region
Name:CDK18_2
Description:cyclin dependent kinase 18
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2532  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,504,556 - 205,504,616EPDNEW
RGD ID:6858734
Promoter ID:EPDNEW_H2532
Type:initiation region
Name:CDK18_1
Description:cyclin dependent kinase 18
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2531  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381205,504,675 - 205,504,735EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:8751 AgrOrtholog
COSMIC CDK18 COSMIC
Ensembl Genes ENSG00000117266 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000360066 ENTREZGENE
  ENST00000360066.6 UniProtKB/Swiss-Prot
  ENST00000419301.1 UniProtKB/TrEMBL
  ENST00000429964 ENTREZGENE
  ENST00000429964.7 UniProtKB/Swiss-Prot
  ENST00000443813.6 UniProtKB/TrEMBL
  ENST00000506784 ENTREZGENE
  ENST00000506784.5 UniProtKB/Swiss-Prot
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000117266 GTEx
HGNC ID HGNC:8751 ENTREZGENE
Human Proteome Map CDK18 Human Proteome Map
InterPro Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:5129 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 5129 ENTREZGENE
OMIM 169190 OMIM
PANTHER CELL DIVISION PROTEIN KINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CYCLIN-DEPENDENT KINASE 18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA33097 PharmGKB
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A0MSJ6_HUMAN UniProtKB/TrEMBL
  B4DK03 ENTREZGENE, UniProtKB/TrEMBL
  CDK18_HUMAN UniProtKB/Swiss-Prot
  D6R9B0_HUMAN UniProtKB/TrEMBL
  Q07002 ENTREZGENE
  Q59G02_HUMAN UniProtKB/TrEMBL
  Q5VXQ2 ENTREZGENE
  Q6V3A2 ENTREZGENE
  Q6V3A3 ENTREZGENE
  Q96F90 ENTREZGENE
UniProt Secondary Q5VXQ2 UniProtKB/Swiss-Prot
  Q6V3A2 UniProtKB/Swiss-Prot
  Q6V3A3 UniProtKB/Swiss-Prot
  Q96F90 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-21 CDK18  cyclin dependent kinase 18    cyclin-dependent kinase 18  Symbol and/or name change 5135510 APPROVED
2011-07-27 CDK18  cyclin-dependent kinase 18  PCTK3  PCTAIRE protein kinase 3  Symbol and/or name change 5135510 APPROVED