Actn2 (actinin alpha 2) - Rat Genome Database

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Gene: Actn2 (actinin alpha 2) Mus musculus
Analyze
Symbol: Actn2
Name: actinin alpha 2
RGD ID: 1317672
MGI Page MGI
Description: Enables several functions, including LIM domain binding activity; nuclear receptor coactivator activity; and transmembrane transporter binding activity. Involved in cardiac muscle cell development; positive regulation of endocytic recycling; and protein localization to plasma membrane. Located in Z disc. Is expressed in several structures, including corpus striatum; face; heart; musculature; and trunk somite. Human ortholog(s) of this gene implicated in arrhythmogenic right ventricular cardiomyopathy; congenital myopathy 8; and dilated cardiomyopathy 1AA. Orthologous to human ACTN2 (actinin alpha 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110008F24Rik; alpha-actinin skeletal muscle; alpha-actinin-2; F-actin cross-linking protein; MGC107582
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391312,284,312 - 12,355,613 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1312,284,312 - 12,355,641 (-)EnsemblGRCm39 Ensembl
GRCm381312,269,426 - 12,340,732 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1312,269,426 - 12,340,760 (-)EnsemblGRCm38mm10GRCm38
MGSCv371312,361,693 - 12,432,999 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361312,323,759 - 12,395,065 (-)NCBIMGSCv36mm8
Celera1312,189,170 - 12,257,137 (-)NCBICelera
Cytogenetic Map13A1NCBI
cM Map134.54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP,ISO)
arotinoid acid  (ISO)
arsenite(3-)  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
cantharidin  (EXP)
CHIR 99021  (ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
cortisol  (ISO)
dexamethasone  (EXP)
dextran sulfate  (EXP)
dioxygen  (EXP)
doxorubicin  (ISO)
Echimidine  (ISO)
ethanol  (EXP)
folic acid  (EXP)
fulvestrant  (ISO)
genistein  (ISO)
glycidyl methacrylate  (ISO)
graphite  (EXP)
Heliotrine  (ISO)
heroin  (ISO)
L-ascorbic acid  (ISO)
L-ascorbic acid 2-phosphate  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
maraviroc  (EXP)
mercury dichloride  (ISO)
methapyrilene  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
nickel dichloride  (ISO)
nickel subsulfide  (ISO)
nitrofen  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
pioglitazone  (EXP)
resveratrol  (EXP)
ribavirin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
sodium fluoride  (ISO)
spermine  (EXP)
sunitinib  (ISO)
thalidomide  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
triclosan  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
XAV939  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Familial effort polymorphic ventricular arrhythmias in arrhythmogenic right ventricular cardiomyopathy map to chromosome 1q42-43. Bauce B, etal., Am J Cardiol. 2000 Mar 1;85(5):573-9.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Eosinophil degranulation is more important than eosinophilia in identifying asthma in chronic cough. Kim CK, etal., J Asthma. 2011 Dec;48(10):994-1000. doi: 10.3109/02770903.2011.623335. Epub 2011 Oct 24.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7588068   PMID:8618961   PMID:9027500   PMID:9268580   PMID:9438383   PMID:10349636   PMID:10391924   PMID:10506186   PMID:10788519   PMID:10862698   PMID:10922068   PMID:11042159  
PMID:11076861   PMID:11114196   PMID:11381084   PMID:11440986   PMID:11724819   PMID:11780064   PMID:11842093   PMID:11988168   PMID:12477932   PMID:12782671   PMID:12837758   PMID:14610273  
PMID:14657235   PMID:14681479   PMID:15072553   PMID:15465019   PMID:15517585   PMID:15665106   PMID:15721864   PMID:15765519   PMID:15841212   PMID:16120608   PMID:16141072   PMID:16141073  
PMID:16314518   PMID:16337936   PMID:16407236   PMID:16585392   PMID:16635246   PMID:16638982   PMID:16710293   PMID:17110593   PMID:17360664   PMID:17904117   PMID:18425115   PMID:18554416  
PMID:18761673   PMID:18799693   PMID:18849322   PMID:19055765   PMID:19091769   PMID:19217425   PMID:19622544   PMID:19815520   PMID:19932097   PMID:19943616   PMID:20124353   PMID:20207226  
PMID:20215401   PMID:20368620   PMID:20558824   PMID:21289070   PMID:21364285   PMID:21379568   PMID:21536590   PMID:21659647   PMID:21677750   PMID:21750042   PMID:21873635   PMID:21884692  
PMID:21940706   PMID:22282597   PMID:22343712   PMID:22427672   PMID:22509354   PMID:22683331   PMID:22693585   PMID:22855565   PMID:23236519   PMID:23369715   PMID:23664615   PMID:23785297  
PMID:24335256   PMID:24472646   PMID:24500875   PMID:24840128   PMID:25299188   PMID:25348719   PMID:25787764   PMID:25944877   PMID:25987543   PMID:26075897   PMID:26113728   PMID:26143257  
PMID:26212757   PMID:26688546   PMID:27333774   PMID:27348591   PMID:27405468   PMID:27725084   PMID:28111199   PMID:28239148   PMID:28634551   PMID:28669819   PMID:28826478   PMID:28826497  
PMID:29021295   PMID:29078393   PMID:29117561   PMID:29206857   PMID:29374072   PMID:29565969   PMID:29891665   PMID:30121012   PMID:30335684   PMID:30457570   PMID:30562941   PMID:30947518  
PMID:31201155   PMID:31467300   PMID:31513549   PMID:31573406   PMID:31581792   PMID:31688894   PMID:32068311   PMID:32325033   PMID:32376900   PMID:32420594   PMID:32451822   PMID:32994313  
PMID:33361330   PMID:33397958   PMID:33414188   PMID:33601422   PMID:33742095   PMID:33773096   PMID:34618403   PMID:34966794   PMID:35177595   PMID:35260907   PMID:35899771   PMID:36460641  
PMID:36706168   PMID:36899856   PMID:37067297   PMID:37158107   PMID:37337244   PMID:37543677   PMID:37787076  


Genomics

Comparative Map Data
Actn2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391312,284,312 - 12,355,613 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1312,284,312 - 12,355,641 (-)EnsemblGRCm39 Ensembl
GRCm381312,269,426 - 12,340,732 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1312,269,426 - 12,340,760 (-)EnsemblGRCm38mm10GRCm38
MGSCv371312,361,693 - 12,432,999 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361312,323,759 - 12,395,065 (-)NCBIMGSCv36mm8
Celera1312,189,170 - 12,257,137 (-)NCBICelera
Cytogenetic Map13A1NCBI
cM Map134.54NCBI
ACTN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381236,686,499 - 236,764,631 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1236,664,141 - 236,764,631 (+)EnsemblGRCh38hg38GRCh38
GRCh371236,849,799 - 236,927,931 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361234,916,422 - 234,993,863 (+)NCBINCBI36Build 36hg18NCBI36
Build 341233,175,848 - 233,253,281NCBI
Celera1210,097,994 - 210,176,743 (+)NCBICelera
Cytogenetic Map1q43NCBI
HuRef1207,337,725 - 207,384,040 (+)NCBIHuRef
CHM1_11238,123,313 - 238,199,388 (+)NCBICHM1_1
T2T-CHM13v2.01236,087,386 - 236,175,684 (+)NCBIT2T-CHM13v2.0
Actn2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81762,835,055 - 62,902,331 (+)NCBIGRCr8
mRatBN7.21758,143,334 - 58,210,622 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1758,142,625 - 58,210,622 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1761,331,681 - 61,398,784 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01765,334,806 - 65,401,909 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01759,489,000 - 59,556,099 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01766,304,530 - 66,397,647 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1766,304,501 - 66,397,653 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01768,050,946 - 68,143,522 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41768,705,160 - 68,773,261 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11768,681,756 - 68,784,094 (+)NCBI
Celera1762,323,048 - 62,390,681 (-)NCBICelera
Cytogenetic Map17q12.1NCBI
Actn2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554923,483,511 - 3,555,190 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554923,483,704 - 3,554,831 (-)NCBIChiLan1.0ChiLan1.0
ACTN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2112,395,471 - 12,501,244 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1112,611,346 - 12,711,988 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01212,245,742 - 212,323,387 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11217,276,899 - 217,321,103 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1217,272,597 - 217,321,103 (+)Ensemblpanpan1.1panPan2
ACTN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.143,348,529 - 3,415,275 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl43,348,449 - 3,415,273 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha43,395,551 - 3,461,987 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.043,368,361 - 3,435,149 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl43,366,635 - 3,434,981 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.143,368,494 - 3,434,944 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.043,498,915 - 3,565,693 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.043,719,762 - 3,786,237 (-)NCBIUU_Cfam_GSD_1.0
Actn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934440,023,215 - 40,083,168 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648416,186,642 - 16,248,400 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648416,186,844 - 16,248,394 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACTN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1454,666,623 - 54,742,778 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11454,670,727 - 54,742,717 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21458,645,069 - 58,717,200 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACTN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12573,827,900 - 73,904,516 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2573,827,874 - 73,905,146 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605575,920,990 - 76,003,746 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Actn2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477513,916,883 - 13,989,153 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477513,917,215 - 13,989,093 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Actn2
2632 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:375
Count of miRNA genes:239
Interacting mature miRNAs:270
Transcripts:ENSMUST00000064204, ENSMUST00000110616, ENSMUST00000168193
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301890Adip7_madiposity 7 (mouse)Not determined13123454672Mouse
1301227Skull19_mskull morphology 19 (mouse)Not determined13123454672Mouse
1301661Tshp13_mtooth shape 13 (mouse)Not determined13123454672Mouse
1301255Cd4ts6_mCD4 T cell subset 6 (mouse)Not determined1316854534168684Mouse
10449140Eosn2_meosinophil differential 2 (mouse)1322131134221311Mouse
15039338Nmrs34_mNAFLD-associated magnetic resonance shift 34 (mouse)1322131134221311Mouse
1301455Bmd3_mbone mineral density 3 (mouse)Not determined13347761237477820Mouse
10045624Heal24_mwound healing/regeneration (mouse)Not determined13347761237477820Mouse
10045625Heal23_mwound healing/regeneration 23 (mouse)Not determined13347761237477820Mouse
1301367Twq1_mtestis weight QTL 1 (mouse)Not determined13361551237615672Mouse
1301733Heal3_mwound healing/regeneration 3 (mouse)Not determined13368020037680343Mouse
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
1558898Hpi1_mhapatic PMN infiltration 1 (mouse)Not determined13441402553101640Mouse

Markers in Region
D13Mit173  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381312,330,386 - 12,330,533UniSTSGRCm38
MGSCv371312,422,653 - 12,422,800UniSTSGRCm37
Celera1312,250,049 - 12,250,213UniSTS
Cytogenetic Map13A1UniSTS
cM Map137.0UniSTS
Whitehead Genetic132.2UniSTS
Whitehead/MRC_RH13189.5UniSTS
Whitehead_YAC13 UniSTS
Actn2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13A1UniSTS
cM Map137.0UniSTS
Actn2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381312,309,671 - 12,310,923UniSTSGRCm38
MGSCv371312,401,938 - 12,403,190UniSTSGRCm37
Celera1312,229,337 - 12,230,589UniSTS
Cytogenetic Map13A1UniSTS
cM Map137.0UniSTS
Actn2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13A1UniSTS
cM Map137.0UniSTS
Actn2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13A1UniSTS
cM Map137.0UniSTS
cM Map12 UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000064204   ⟹   ENSMUSP00000067708
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1312,284,312 - 12,355,641 (-)Ensembl
GRCm38.p6 Ensembl1312,269,426 - 12,340,760 (-)Ensembl
RefSeq Acc Id: ENSMUST00000110616
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1312,323,105 - 12,355,613 (-)Ensembl
GRCm38.p6 Ensembl1312,308,219 - 12,340,732 (-)Ensembl
RefSeq Acc Id: ENSMUST00000168193   ⟹   ENSMUSP00000129609
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1312,284,321 - 12,355,605 (-)Ensembl
GRCm38.p6 Ensembl1312,269,435 - 12,340,724 (-)Ensembl
RefSeq Acc Id: ENSMUST00000221162   ⟹   ENSMUSP00000152121
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1312,289,964 - 12,297,433 (-)Ensembl
GRCm38.p6 Ensembl1312,275,078 - 12,282,547 (-)Ensembl
RefSeq Acc Id: ENSMUST00000222034
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1312,284,364 - 12,288,982 (-)Ensembl
GRCm38.p6 Ensembl1312,269,478 - 12,274,096 (-)Ensembl
RefSeq Acc Id: NM_033268   ⟹   NP_150371
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391312,284,312 - 12,355,613 (-)NCBI
GRCm381312,269,426 - 12,340,732 (-)ENTREZGENE
MGSCv371312,361,693 - 12,432,999 (-)RGD
Celera1312,189,170 - 12,257,137 (-)RGD
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036157837   ⟹   XP_036013730
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391312,284,312 - 12,325,821 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_150371   ⟸   NM_033268
- UniProtKB: G3UW84 (UniProtKB/Swiss-Prot),   Q9JI91 (UniProtKB/Swiss-Prot),   Q8K3Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000129609   ⟸   ENSMUST00000168193
RefSeq Acc Id: ENSMUSP00000067708   ⟸   ENSMUST00000064204
RefSeq Acc Id: ENSMUSP00000152121   ⟸   ENSMUST00000221162
RefSeq Acc Id: XP_036013730   ⟸   XM_036157837
- Peptide Label: isoform X1
Protein Domains
Calponin-homology (CH)   EF-hand

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JI91-F1-model_v2 AlphaFold Q9JI91 1-894 view protein structure

Promoters
RGD ID:8679578
Promoter ID:EPDNEW_M17820
Type:multiple initiation site
Name:Actn2_1
Description:Mus musculus actinin alpha 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381312,340,732 - 12,340,792EPDNEW
RGD ID:6847023
Promoter ID:MM_ACW:12441
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ACTN2.CSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361312,365,761 - 12,366,261 (-)MPROMDB
RGD ID:6823630
Promoter ID:MM_KWN:13226
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:ENSMUST00000110616,   OTTMUST00000041266
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361312,432,626 - 12,433,126 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109192 AgrOrtholog
Ensembl Genes ENSMUSG00000052374 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000064204 ENTREZGENE
  ENSMUST00000064204.14 UniProtKB/Swiss-Prot
  ENSMUST00000168193.8 UniProtKB/Swiss-Prot
  ENSMUST00000221162.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.58.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Actinin_actin-bd_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CH-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand-dom_pair UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand_Ca_insen UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Spectrin/alpha-actinin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Spectrin_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11472 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:109192 ENTREZGENE
NCBI Gene 11472 ENTREZGENE
PANTHER ALPHA-ACTININ-2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EFhand_Ca_insen UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00307 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Spectrin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Actn2 PhenoGen
PROSITE ACTININ_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ACTININ_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50021 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART EFh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  efhand_Ca_insen UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00033 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPEC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Spectrin repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47576 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1Y7VMW4_MOUSE UniProtKB/TrEMBL
  ACTN2_MOUSE UniProtKB/Swiss-Prot
  G3UW84 ENTREZGENE
  Q5FW75_MOUSE UniProtKB/TrEMBL
  Q8K3Q4 ENTREZGENE, UniProtKB/TrEMBL
  Q9CTH3_MOUSE UniProtKB/TrEMBL
  Q9JI91 ENTREZGENE
UniProt Secondary G3UW84 UniProtKB/Swiss-Prot