Csnk2a2 (casein kinase 2, alpha prime polypeptide) - Rat Genome Database

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Gene: Csnk2a2 (casein kinase 2, alpha prime polypeptide) Mus musculus
Analyze
Symbol: Csnk2a2
Name: casein kinase 2, alpha prime polypeptide
RGD ID: 1315752
MGI Page MGI
Description: Enables protein serine/threonine kinase activity. Acts upstream of or within regulation of cell cycle and spermatogenesis. Predicted to be located in acrosomal vesicle. Predicted to be part of PcG protein complex; chromatin; and protein kinase CK2 complex. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Used to study male infertility. Orthologous to human CSNK2A2 (casein kinase 2 alpha 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110035J23Rik; C77789; casein kinase II subunit alpha'; casein kinase II, alpha 2, polypeptide; CK II alpha'; CK2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39896,172,724 - 96,215,505 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl896,172,724 - 96,216,667 (-)EnsemblGRCm39 Ensembl
GRCm38895,446,096 - 95,488,868 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl895,446,096 - 95,490,039 (-)EnsemblGRCm38mm10GRCm38
MGSCv37897,969,996 - 98,012,720 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36898,337,101 - 98,377,919 (-)NCBIMGSCv36mm8
Celera899,760,768 - 99,802,427 (-)NCBICelera
Cytogenetic Map8C5- D1NCBI
cM Map847.12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-aza-2'-deoxycytidine  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
aristolochic acid A  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP)
bisphenol A  (ISO)
bisphenol F  (ISO)
buspirone  (ISO)
C60 fullerene  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbamazepine  (ISO)
chloroprene  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
daidzein  (EXP)
diazinon  (ISO)
diclofenac  (ISO)
diethylstilbestrol  (EXP)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
ethyl methanesulfonate  (ISO)
fenthion  (EXP)
flutamide  (ISO)
folic acid  (EXP)
gentamycin  (ISO)
ivermectin  (ISO)
lead diacetate  (EXP)
lead(0)  (ISO)
methidathion  (EXP)
methimazole  (ISO)
methoxyacetic acid  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
Monobutylphthalate  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-Vinyl-2-pyrrolidone  (ISO)
nickel dichloride  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP)
paraquat  (ISO)
phytoestrogen  (EXP)
pirinixic acid  (EXP)
piroxicam  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
quercitrin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
staurosporine  (EXP)
sulfadimethoxine  (ISO)
sulindac  (ISO)
sunitinib  (ISO)
thapsigargin  (ISO)
trichostatin A  (ISO)
troglitazone  (EXP)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vanadium atom  (ISO)
vanadium(0)  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. Expression of protein kinase CK2 in astroglial cells of normal and neovascularized retina. Kramerov AA, etal., Am J Pathol. 2006 May;168(5):1722-36.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
9. Mouse MP Annotation Import Pipeline RGD automated import pipeline
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. Selective removal of mitochondria via mitophagy: distinct pathways for different mitochondrial stresses. Wei H, etal., Biochim Biophys Acta. 2015 Oct;1853(10 Pt B):2784-90. doi: 10.1016/j.bbamcr.2015.03.013. Epub 2015 Apr 1.
Additional References at PubMed
PMID:1497660   PMID:1766873   PMID:7774911   PMID:8889548   PMID:9503019   PMID:9694889   PMID:9930856   PMID:10094394   PMID:10226653   PMID:10349636   PMID:10471512   PMID:10782213  
PMID:10922068   PMID:11042159   PMID:11076861   PMID:11423974   PMID:11544199   PMID:11827167   PMID:11827178   PMID:12393879   PMID:12466282   PMID:12477932   PMID:12485876   PMID:12520002  
PMID:12950107   PMID:14610273   PMID:14644449   PMID:14645204   PMID:14681479   PMID:15489334   PMID:15634760   PMID:15649893   PMID:15761153   PMID:15818404   PMID:16141072   PMID:16141073  
PMID:16308564   PMID:16581776   PMID:17142752   PMID:17296600   PMID:17309103   PMID:17954558   PMID:18269917   PMID:18287559   PMID:18467326   PMID:18496528   PMID:18559419   PMID:18587631  
PMID:18594950   PMID:18799693   PMID:19273531   PMID:19282287   PMID:19299560   PMID:19542537   PMID:19556345   PMID:19680552   PMID:20347968   PMID:20849816   PMID:20850541   PMID:20864032  
PMID:21267068   PMID:21527517   PMID:21531890   PMID:21750982   PMID:21761202   PMID:21763800   PMID:21769451   PMID:21873635   PMID:21930781   PMID:22716292   PMID:22763408   PMID:22768244  
PMID:22794259   PMID:23058914   PMID:23290496   PMID:23420842   PMID:23637413   PMID:24058532   PMID:24356888   PMID:24366643   PMID:24628121   PMID:24952961   PMID:25727698   PMID:25810395  
PMID:25950943   PMID:26598688   PMID:27113764   PMID:27312334   PMID:27998980   PMID:28030587   PMID:28052864   PMID:28468969   PMID:28671696   PMID:28706196   PMID:28939766   PMID:29119230  
PMID:29448105   PMID:30196744   PMID:30457570   PMID:30906869   PMID:31779225   PMID:32098917   PMID:32325033   PMID:33363536   PMID:34349120   PMID:34637754   PMID:36552726  


Genomics

Comparative Map Data
Csnk2a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39896,172,724 - 96,215,505 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl896,172,724 - 96,216,667 (-)EnsemblGRCm39 Ensembl
GRCm38895,446,096 - 95,488,868 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl895,446,096 - 95,490,039 (-)EnsemblGRCm38mm10GRCm38
MGSCv37897,969,996 - 98,012,720 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36898,337,101 - 98,377,919 (-)NCBIMGSCv36mm8
Celera899,760,768 - 99,802,427 (-)NCBICelera
Cytogenetic Map8C5- D1NCBI
cM Map847.12NCBI
CSNK2A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381658,157,907 - 58,198,106 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1658,157,907 - 58,198,106 (-)EnsemblGRCh38hg38GRCh38
GRCh371658,191,811 - 58,232,010 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361656,749,312 - 56,789,283 (-)NCBINCBI36Build 36hg18NCBI36
Build 341656,749,314 - 56,789,283NCBI
Celera1642,691,263 - 42,731,230 (-)NCBICelera
Cytogenetic Map16q21NCBI
HuRef1644,059,729 - 44,099,930 (-)NCBIHuRef
CHM1_11659,598,846 - 59,638,724 (-)NCBICHM1_1
T2T-CHM13v2.01663,953,540 - 63,993,732 (-)NCBIT2T-CHM13v2.0
Csnk2a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8199,562,340 - 9,602,136 (+)NCBIGRCr8
mRatBN7.2199,556,443 - 9,596,080 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl199,556,260 - 9,596,080 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx199,521,860 - 9,561,150 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,288,686 - 10,327,976 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0199,575,016 - 9,614,306 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0199,972,537 - 10,012,043 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl199,972,537 - 10,012,043 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0199,956,494 - 9,996,397 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,015,369 - 10,054,662 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11910,020,174 - 10,054,722 (+)NCBI
Celera199,448,494 - 9,487,786 (+)NCBICelera
Cytogenetic Map19p13NCBI
Csnk2a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543315,674,116 - 15,718,894 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543315,677,788 - 15,718,894 (-)NCBIChiLan1.0ChiLan1.0
CSNK2A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21867,620,768 - 67,660,961 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11673,541,651 - 73,581,859 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01638,426,399 - 38,466,575 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11657,557,262 - 57,596,218 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1657,557,270 - 57,596,218 (-)Ensemblpanpan1.1panPan2
CSNK2A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1258,361,328 - 58,441,701 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl258,360,838 - 58,432,371 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha254,991,254 - 55,071,046 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0258,899,781 - 58,979,588 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl258,899,298 - 58,971,571 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1255,731,413 - 55,811,164 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0256,739,015 - 56,818,751 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0257,631,725 - 57,711,511 (+)NCBIUU_Cfam_GSD_1.0
Csnk2a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934949,513,855 - 49,558,667 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647510,033,717 - 10,075,511 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647510,030,408 - 10,073,576 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CSNK2A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,976,930 - 20,016,923 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1619,975,030 - 20,016,768 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,998,939 - 18,074,082 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CSNK2A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1544,093,320 - 44,133,352 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl544,093,215 - 44,133,335 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604732,045,388 - 32,085,772 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Csnk2a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,012,556 - 28,060,413 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474628,012,543 - 28,064,610 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Csnk2a2
1113 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:880
Count of miRNA genes:516
Interacting mature miRNAs:608
Transcripts:ENSMUST00000056919
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6418673698186736Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86466617698666325Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined871032003105032123Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871740461124622354Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71740461124622354Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871829531105829637Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined872122809106123021Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873929123107929226Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)874126628126826739Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined876402145110402251Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined876411976110412125Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined876411976110412125Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined879245241113245331Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879808806113809031Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881819296115819296Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)882345783116345783Mouse
1301766Desp1_mdespair 1 (mouse)Not determined885486208119486373Mouse
1302049Heal1_mwound healing/regeneration 1 (mouse)Not determined886443553120443701Mouse
1301253Skmw2_mskeletal muscle weight 2 (mouse)Not determined886443553120443701Mouse
10045619Heal14_mwound healing/regeneration 14 (mouse)Not determined886443553120443701Mouse
27226796Scvln16_msacral vertebrae length 2, 16 week (mouse)889726628130027694Mouse
14696809Rbcn3_mrod bipolar cell number 3 (mouse)895056628102856632Mouse

Markers in Region
Csnk2a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37897,987,132 - 97,987,468UniSTSGRCm37
Celera899,777,980 - 99,778,324UniSTS
Cytogenetic Map8D1UniSTS
cM Map850.0UniSTS
cM Map850.0UniSTS
RH126242  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38895,451,552 - 95,451,764UniSTSGRCm38
MGSCv37897,975,452 - 97,975,664UniSTSGRCm37
Celera899,766,256 - 99,766,468UniSTS
Cytogenetic Map8D1UniSTS
cM Map850.0UniSTS
Whitehead/MRC_RH81140.23UniSTS
Csnk2a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38895,463,232 - 95,463,568UniSTSGRCm38
MGSCv37897,987,132 - 97,987,468UniSTSGRCm37
Celera899,777,980 - 99,778,324UniSTS
Cytogenetic Map8D1UniSTS
cM Map850.0UniSTS
Csnk2a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8D1UniSTS
cM Map850.0UniSTS
Csnk2a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8D1UniSTS
cM Map850.0UniSTS
Csnk2a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8D1UniSTS
cM Map850.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_009974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC165414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02007852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF012251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF016913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ001420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC047143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM963966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB056745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000056919   ⟹   ENSMUSP00000055919
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,172,724 - 96,215,455 (-)Ensembl
GRCm38.p6 Ensembl895,446,096 - 95,488,827 (-)Ensembl
RefSeq Acc Id: ENSMUST00000211980
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,188,174 - 96,215,413 (-)Ensembl
GRCm38.p6 Ensembl895,461,546 - 95,488,785 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212214   ⟹   ENSMUSP00000148404
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,174,602 - 96,215,408 (-)Ensembl
GRCm38.p6 Ensembl895,447,974 - 95,488,780 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212338
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,187,331 - 96,214,665 (-)Ensembl
GRCm38.p6 Ensembl895,460,703 - 95,488,037 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212441   ⟹   ENSMUSP00000148460
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,187,390 - 96,215,089 (-)Ensembl
GRCm38.p6 Ensembl895,460,762 - 95,488,461 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212615
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,188,221 - 96,216,667 (-)Ensembl
GRCm38.p6 Ensembl895,461,593 - 95,490,039 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212616   ⟹   ENSMUSP00000148660
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,179,995 - 96,214,214 (-)Ensembl
GRCm38.p6 Ensembl895,453,367 - 95,487,586 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212629
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,184,021 - 96,192,613 (-)Ensembl
GRCm38.p6 Ensembl895,457,393 - 95,465,985 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212750   ⟹   ENSMUSP00000148633
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,177,365 - 96,187,342 (-)Ensembl
GRCm38.p6 Ensembl895,450,737 - 95,460,714 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212952   ⟹   ENSMUSP00000148333
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl896,180,049 - 96,214,207 (-)Ensembl
GRCm38.p6 Ensembl895,453,421 - 95,487,579 (-)Ensembl
RefSeq Acc Id: NM_009974   ⟹   NP_034104
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39896,172,724 - 96,215,448 (-)NCBI
GRCm38895,446,096 - 95,488,820 (-)NCBI
MGSCv37897,969,996 - 98,012,720 (-)RGD
Celera899,760,768 - 99,802,427 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530641   ⟹   XP_006530704
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39896,174,600 - 96,215,505 (-)NCBI
GRCm38895,447,972 - 95,488,863 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006530642   ⟹   XP_006530705
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39896,174,600 - 96,215,434 (-)NCBI
GRCm38895,447,972 - 95,488,450 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006530643   ⟹   XP_006530706
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39896,174,600 - 96,215,469 (-)NCBI
GRCm38895,447,972 - 95,488,814 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243279   ⟹   XP_030099139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39896,174,600 - 96,214,562 (-)NCBI
GRCm38895,447,972 - 95,488,160 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153744   ⟹   XP_036009637
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39896,176,021 - 96,215,440 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153745   ⟹   XP_036009638
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39896,176,021 - 96,215,421 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_034104   ⟸   NM_009974
- UniProtKB: O54833 (UniProtKB/Swiss-Prot),   Q545V8 (UniProtKB/TrEMBL),   Q8BPF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530706   ⟸   XM_006530643
- Peptide Label: isoform X2
- UniProtKB: A0A1D5RM74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530704   ⟸   XM_006530641
- Peptide Label: isoform X1
- UniProtKB: Q8BPF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530705   ⟸   XM_006530642
- Peptide Label: isoform X2
- UniProtKB: A0A1D5RM74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030099139   ⟸   XM_030243279
- Peptide Label: isoform X2
- UniProtKB: A0A1D5RM74 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000055919   ⟸   ENSMUST00000056919
RefSeq Acc Id: ENSMUSP00000148333   ⟸   ENSMUST00000212952
RefSeq Acc Id: ENSMUSP00000148660   ⟸   ENSMUST00000212616
RefSeq Acc Id: ENSMUSP00000148633   ⟸   ENSMUST00000212750
RefSeq Acc Id: ENSMUSP00000148404   ⟸   ENSMUST00000212214
RefSeq Acc Id: ENSMUSP00000148460   ⟸   ENSMUST00000212441
RefSeq Acc Id: XP_036009637   ⟸   XM_036153744
- Peptide Label: isoform X2
- UniProtKB: A0A1D5RM74 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009638   ⟸   XM_036153745
- Peptide Label: isoform X2
- UniProtKB: A0A1D5RM74 (UniProtKB/TrEMBL)
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O54833-F1-model_v2 AlphaFold O54833 1-350 view protein structure

Promoters
RGD ID:8667961
Promoter ID:EPDNEW_M12012
Type:initiation region
Name:Csnk2a2_1
Description:Mus musculus casein kinase 2, alpha prime polypeptide , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38895,488,818 - 95,488,878EPDNEW
RGD ID:6842990
Promoter ID:MM_KWN:55394
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung
Transcripts:ENSMUST00000093266,   NM_009974,   UC009MYL.1,   UC009MYM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36898,012,469 - 98,012,969 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88547 AgrOrtholog
Ensembl Genes ENSMUSG00000046707 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000056919 ENTREZGENE
  ENSMUST00000056919.9 UniProtKB/Swiss-Prot
  ENSMUST00000212214.2 UniProtKB/Swiss-Prot
  ENSMUST00000212441.2 UniProtKB/TrEMBL
  ENSMUST00000212616 ENTREZGENE
  ENSMUST00000212616.2 UniProtKB/TrEMBL
  ENSMUST00000212750.2 UniProtKB/TrEMBL
  ENSMUST00000212952.2 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CK2_alpha UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:13000 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:88547 ENTREZGENE
NCBI Gene 13000 ENTREZGENE
PANTHER CASEIN KINASE II SUBUNIT ALPHA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR24054 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Csnk2a2 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1D5RLE4_MOUSE UniProtKB/TrEMBL
  A0A1D5RLQ2_MOUSE UniProtKB/TrEMBL
  A0A1D5RM55_MOUSE UniProtKB/TrEMBL
  A0A1D5RM74 ENTREZGENE, UniProtKB/TrEMBL
  CSK22_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q545V8 ENTREZGENE, UniProtKB/TrEMBL
  Q8BPF9 ENTREZGENE, UniProtKB/TrEMBL
  Q8CDH5_MOUSE UniProtKB/TrEMBL