Rasgrp3 (RAS, guanyl releasing protein 3) - Rat Genome Database

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Gene: Rasgrp3 (RAS, guanyl releasing protein 3) Mus musculus
Analyze
Symbol: Rasgrp3
Name: RAS, guanyl releasing protein 3
RGD ID: 1312153
MGI Page MGI
Description: Enables guanyl-nucleotide exchange factor activity; kinase binding activity; and small GTPase binding activity. Acts upstream of or within Ras protein signal transduction. Located in perinuclear region of cytoplasm. Part of guanyl-nucleotide exchange factor complex. Is expressed in embryo and thymus primordium. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human RASGRP3 (RAS guanyl releasing protein 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BC066069; Gm327; MGC74365; MGC79207; ras guanyl-releasing protein 3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391775,742,849 - 75,836,049 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1775,742,891 - 75,836,049 (+)EnsemblGRCm39 Ensembl
GRCm381775,435,870 - 75,529,054 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1775,435,896 - 75,529,054 (+)EnsemblGRCm38mm10GRCm38
MGSCv371775,835,245 - 75,928,394 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361775,370,673 - 75,434,104 (+)NCBIMGSCv36mm8
Celera1779,726,720 - 79,821,715 (+)NCBICelera
Cytogenetic Map17E2NCBI
cM Map1746.55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3-chloropropane-1,2-diol  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxynon-2-enal  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
buta-1,3-diene  (EXP)
butanal  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chloroprene  (EXP)
chromium(6+)  (ISO)
chrysene  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
Cuprizon  (ISO)
cylindrospermopsin  (ISO)
delta-tocotrienol  (EXP)
dexamethasone  (EXP)
dextran sulfate  (EXP)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (ISO)
dimethylarsinic acid  (EXP)
dioxygen  (EXP)
doxorubicin  (ISO)
endosulfan  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
gentamycin  (ISO)
lipopolysaccharide  (EXP,ISO)
methamphetamine  (ISO)
methotrexate  (ISO)
methylarsonic acid  (EXP)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
paracetamol  (ISO)
pentanal  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
quercetin  (EXP,ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
succimer  (EXP)
sulforaphane  (ISO)
tert-butyl hydroperoxide  (ISO)
tetraphene  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
triticonazole  (ISO)
troglitazone  (EXP)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Genome-wide association study of young-onset hypertension in the Han Chinese population of Taiwan. Yang HC, etal., PLoS One. 2009;4(5):e5459. Epub 2009 May 7.
Additional References at PubMed
PMID:12466851   PMID:12477932   PMID:14681479   PMID:14691545   PMID:15368895   PMID:15545601   PMID:15572660   PMID:15894621   PMID:16141072   PMID:16301621   PMID:16530850   PMID:16602821  
PMID:18172297   PMID:19100522   PMID:21267068   PMID:21474816   PMID:21822279   PMID:21873635   PMID:23308188   PMID:25118589   PMID:27465532   PMID:29490280  


Genomics

Comparative Map Data
Rasgrp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391775,742,849 - 75,836,049 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1775,742,891 - 75,836,049 (+)EnsemblGRCm39 Ensembl
GRCm381775,435,870 - 75,529,054 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1775,435,896 - 75,529,054 (+)EnsemblGRCm38mm10GRCm38
MGSCv371775,835,245 - 75,928,394 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361775,370,673 - 75,434,104 (+)NCBIMGSCv36mm8
Celera1779,726,720 - 79,821,715 (+)NCBICelera
Cytogenetic Map17E2NCBI
cM Map1746.55NCBI
RASGRP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38233,436,348 - 33,564,731 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl233,436,324 - 33,564,750 (+)EnsemblGRCh38hg38GRCh38
GRCh37233,661,415 - 33,789,798 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36233,514,920 - 33,643,162 (+)NCBINCBI36Build 36hg18NCBI36
Celera233,500,106 - 33,628,502 (+)NCBICelera
Cytogenetic Map2p22.3NCBI
HuRef233,395,400 - 33,523,736 (+)NCBIHuRef
CHM1_1233,590,740 - 33,719,120 (+)NCBICHM1_1
T2T-CHM13v2.0233,482,495 - 33,610,876 (+)NCBIT2T-CHM13v2.0
Rasgrp3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8625,647,386 - 25,745,952 (-)NCBIGRCr8
mRatBN7.2619,895,361 - 19,993,945 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl619,895,390 - 19,958,578 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx620,225,551 - 20,288,760 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0620,541,387 - 20,604,597 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0620,021,820 - 20,085,037 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0621,072,634 - 21,171,619 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl621,072,634 - 21,135,880 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0630,966,364 - 31,065,175 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4619,808,453 - 19,871,923 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1619,815,248 - 19,848,714 (-)NCBI
Celera619,464,356 - 19,527,205 (-)NCBICelera
Cytogenetic Map6q12-q13NCBI
Rasgrp3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554411,679,108 - 1,786,397 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554411,679,258 - 1,786,397 (+)NCBIChiLan1.0ChiLan1.0
RASGRP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21292,937,226 - 93,095,098 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A92,941,198 - 93,004,430 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A33,444,941 - 33,572,829 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A34,156,780 - 34,284,307 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A34,196,421 - 34,284,307 (+)Ensemblpanpan1.1panPan2
RASGRP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11726,560,832 - 26,657,276 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1726,569,488 - 26,655,361 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1726,350,794 - 26,449,397 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01727,127,589 - 27,226,234 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1727,127,678 - 27,226,226 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11726,423,287 - 26,521,834 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01726,496,776 - 26,595,712 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01726,653,466 - 26,752,215 (+)NCBIUU_Cfam_GSD_1.0
Rasgrp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629270,633,719 - 70,735,839 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936493109,275 - 143,640 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936493103,937 - 205,819 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RASGRP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3106,099,821 - 106,213,728 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13106,098,541 - 106,213,787 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23112,971,430 - 113,002,767 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RASGRP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11473,871,343 - 73,950,119 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1473,895,534 - 73,946,358 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604537,985,721 - 38,114,455 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rasgrp3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473815,130,891 - 15,236,445 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473815,130,709 - 15,237,869 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rasgrp3
3962 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1533
Count of miRNA genes:477
Interacting mature miRNAs:567
Transcripts:ENSMUST00000095204, ENSMUST00000164192
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174651092682407429Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined175020395784204103Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4142201Obrq15_mobesity resistance QTL 15 (mouse)Not determined5753444780885776Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
13464254Ifvrq3_minfluenza virus resistance QTL 3 (mouse)176795765583908089Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177339513295294699Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177339513295294699Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7410765193507179Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177458908990395270Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177458908990395270Mouse

Markers in Region
Rasgrp3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17E2UniSTS
cM Map17 UniSTS
d6rat42  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381775,440,808 - 75,440,932UniSTSGRCm38
MGSCv371775,840,148 - 75,840,272UniSTSGRCm37
Celera1779,731,623 - 79,731,747UniSTS
Cytogenetic Map17E2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001166493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001360103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001411230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_207246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB154824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC118018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY123705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD348455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ064681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ131259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN695386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000095204   ⟹   ENSMUSP00000092828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1775,772,481 - 75,836,049 (+)Ensembl
GRCm38.p6 Ensembl1775,465,486 - 75,529,054 (+)Ensembl
RefSeq Acc Id: ENSMUST00000164192   ⟹   ENSMUSP00000129393
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1775,742,921 - 75,836,049 (+)Ensembl
GRCm38.p6 Ensembl1775,435,926 - 75,529,054 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234011   ⟹   ENSMUSP00000156978
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1775,798,099 - 75,803,412 (+)Ensembl
GRCm38.p6 Ensembl1775,491,104 - 75,496,417 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234640
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1775,742,921 - 75,759,313 (+)Ensembl
GRCm38.p6 Ensembl1775,435,926 - 75,452,318 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234644
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1775,772,614 - 75,787,119 (+)Ensembl
GRCm38.p6 Ensembl1775,465,619 - 75,480,124 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234660   ⟹   ENSMUSP00000157183
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1775,772,567 - 75,801,239 (+)Ensembl
GRCm38.p6 Ensembl1775,465,572 - 75,494,244 (+)Ensembl
RefSeq Acc Id: ENSMUST00000235103
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1775,742,891 - 75,798,785 (+)Ensembl
GRCm38.p6 Ensembl1775,435,896 - 75,491,790 (+)Ensembl
RefSeq Acc Id: NM_001166493   ⟹   NP_001159965
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391775,742,891 - 75,836,049 (+)NCBI
GRCm381775,435,905 - 75,529,054 (+)NCBI
MGSCv371775,835,245 - 75,928,394 (+)RGD
Celera1779,726,720 - 79,821,715 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001360103   ⟹   NP_001347032
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391775,772,533 - 75,836,049 (+)NCBI
GRCm381775,465,538 - 75,529,054 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001411230   ⟹   NP_001398159
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391775,742,891 - 75,836,049 (+)NCBI
RefSeq Acc Id: NM_207246   ⟹   NP_997129
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391775,772,533 - 75,836,049 (+)NCBI
GRCm381775,465,538 - 75,529,054 (+)NCBI
MGSCv371775,835,245 - 75,928,394 (+)RGD
Celera1779,726,720 - 79,821,715 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006524273   ⟹   XP_006524336
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391775,742,849 - 75,835,659 (+)NCBI
GRCm381775,435,870 - 75,528,664 (+)NCBI
Sequence:
RefSeq Acc Id: NP_997129   ⟸   NM_207246
- UniProtKB: Q6NZH9 (UniProtKB/TrEMBL),   Q69ZX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001159965   ⟸   NM_001166493
- UniProtKB: Q6NZH9 (UniProtKB/TrEMBL),   Q69ZX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524336   ⟸   XM_006524273
- Peptide Label: isoform X2
- UniProtKB: Q69ZX7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001347032   ⟸   NM_001360103
- UniProtKB: Q6NZH9 (UniProtKB/TrEMBL),   Q69ZX7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000129393   ⟸   ENSMUST00000164192
RefSeq Acc Id: ENSMUSP00000092828   ⟸   ENSMUST00000095204
RefSeq Acc Id: ENSMUSP00000157183   ⟸   ENSMUST00000234660
RefSeq Acc Id: ENSMUSP00000156978   ⟸   ENSMUST00000234011
RefSeq Acc Id: NP_001398159   ⟸   NM_001411230
- UniProtKB: Q6NZH9 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6NZH9-F1-model_v2 AlphaFold Q6NZH9 1-691 view protein structure

Promoters
RGD ID:13676784
Promoter ID:EPDNEW_M22541
Type:initiation region
Name:Rasgrp3_1
Description:Mus musculus RAS, guanyl releasing protein 3 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22542  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381775,435,899 - 75,435,959EPDNEW
RGD ID:13676786
Promoter ID:EPDNEW_M22542
Type:multiple initiation site
Name:Rasgrp3_2
Description:Mus musculus RAS, guanyl releasing protein 3 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22541  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381775,465,619 - 75,465,679EPDNEW
RGD ID:6828555
Promoter ID:MM_KWN:24212
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_207246
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361775,864,181 - 75,864,927 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3028579 AgrOrtholog
Ensembl Genes ENSMUSG00000071042 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000095204 ENTREZGENE
  ENSMUST00000095204.6 UniProtKB/TrEMBL
  ENSMUST00000164192 ENTREZGENE
  ENSMUST00000164192.9 UniProtKB/TrEMBL
  ENSMUST00000234011.2 UniProtKB/TrEMBL
  ENSMUST00000234660.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.840.10 UniProtKB/TrEMBL
  3.30.60.20 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
  Son of sevenless (SoS) protein Chain: S domain 1 UniProtKB/TrEMBL
InterPro C1-like_sf UniProtKB/TrEMBL
  DAG/PE-bd UniProtKB/TrEMBL
  EF-hand-like_dom UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_Ca-bd UniProtKB/TrEMBL
  Prot_Kinase_C-like_PE/DAG-bd UniProtKB/TrEMBL
  Ras-like_GEF UniProtKB/TrEMBL
  Ras-like_Gua-exchang_fac_N UniProtKB/TrEMBL
  Ras_GEF_dom UniProtKB/TrEMBL
  RASGEF_cat_dom_sf UniProtKB/TrEMBL
  RasGRF_CDC25 UniProtKB/TrEMBL
KEGG Report mmu:240168 UniProtKB/TrEMBL
MGD MGI:3028579 ENTREZGENE
NCBI Gene 240168 ENTREZGENE
PANTHER PTHR23113 UniProtKB/TrEMBL
  PTHR23113:SF178 UniProtKB/TrEMBL
Pfam C1_1 UniProtKB/TrEMBL
  EF-hand_7 UniProtKB/TrEMBL
  RasGEF UniProtKB/TrEMBL
PhenoGen Rasgrp3 PhenoGen
PRINTS DAGPEDOMAIN UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
  RASGEF_CAT UniProtKB/TrEMBL
  RASGEF_NTER UniProtKB/TrEMBL
  ZF_DAG_PE_1 UniProtKB/TrEMBL
  ZF_DAG_PE_2 UniProtKB/TrEMBL
SMART EFh UniProtKB/TrEMBL
  RasGEF UniProtKB/TrEMBL
  RasGEFN UniProtKB/TrEMBL
  SM00109 UniProtKB/TrEMBL
Superfamily-SCOP Ras_GEF UniProtKB/TrEMBL
  SSF47473 UniProtKB/TrEMBL
  SSF57889 UniProtKB/TrEMBL
UniProt A0A3Q4EC09_MOUSE UniProtKB/TrEMBL
  A0A3Q4EG32_MOUSE UniProtKB/TrEMBL
  Q2PHE9_MOUSE UniProtKB/TrEMBL
  Q69ZX7 ENTREZGENE, UniProtKB/TrEMBL
  Q6NZH9 ENTREZGENE, UniProtKB/TrEMBL