Gene: Tpcn2 (two pore segment channel 2) Rattus norvegicus
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Symbol: Tpcn2
Name: two pore segment channel 2
Description: ENCODES a protein that exhibits identical protein binding (ortholog); NAADP-sensitive calcium-release channel activity (ortholog); protein kinase binding (ortholog); INVOLVED IN response to vitamin D; calcium-mediated signaling (ortholog); cellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Skin/Hair/Eye Pigmentation, Variation In, 10 (ortholog); FOUND IN endosome membrane (ortholog); lysosomal membrane (ortholog); lysosome (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC309139; two pore calcium channel protein 2
Orthologs:
Homo sapiens (human) : TPCN2 (two pore segment channel 2)  HGNC  AGR
Mus musculus (house mouse) : Tpcn2 (two pore segment channel 2)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Tpcn2 (two pore segment channel 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TPCN2 (two pore segment channel 2)
Canis lupus familiaris (dog) : TPCN2 (two pore segment channel 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tpcn2 (two pore segment channel 2)
more info ...
Allele / Splice: Tpcn2em1Mcwi  
Genetic Models: SS-Tpcn2em1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01218,419,182 - 218,448,902 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01225,286,480 - 225,316,685 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41205,702,971 - 205,732,664 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11205,857,086 - 205,886,037 (-)NCBI
Celera1197,971,266 - 198,000,753 (-)NCBI
Cytogenetic Map1q42NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Candidate Gene Status
Comparative Map Data
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tpcn2
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
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Vista + UCSC

RGD Object Information
RGD ID: 1311779
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE