Gene: Alms1 (ALMS1, centrosome and basal body associated protein) Rattus norvegicus
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Symbol: Alms1
Name: ALMS1, centrosome and basal body associated protein
Description: ENCODES a protein that exhibits alpha-actinin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Alstrom Syndrome (ortholog); Alstrom syndrome (ortholog); Cardiomyopathies (ortholog); FOUND IN centriole; ciliary basal body; centrosome (ortholog); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 2-amino-4,6-dinitrotoluene
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Alstrom syndrome 1 homolog; Alstrom syndrome protein 1; LOC297408
Orthologs:
Homo sapiens (human) : ALMS1 (ALMS1, centrosome and basal body associated protein)  HGNC  AGR
Mus musculus (house mouse) : Alms1 (ALMS1, centrosome and basal body associated)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Alms1 (ALMS1, centrosome and basal body associated protein)
Pan paniscus (bonobo/pygmy chimpanzee) : ALMS1 (ALMS1, centrosome and basal body associated protein)
Canis lupus familiaris (dog) : ALMS1 (ALMS1, centrosome and basal body associated protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Alms1 (ALMS1, centrosome and basal body associated protein)
more info ...
Allele / Splice: Alms1em1Mcwi  
Genetic Models: SS-Alms1em1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04117,371,544 - 117,472,310 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04181,947,469 - 182,048,235 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44119,846,037 - 119,946,085 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14120,087,754 - 120,190,647 (+)NCBI
Celera4107,106,971 - 107,206,695 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Alms1
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311590
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE