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Gene Ontology Annotations
Gene Ontology AnnotationsBiological Process Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | anterior/posterior pattern specification | | ISO | RGD:1322646 | 1624291 | MGI:MGI:2387775 | RGD | MGI:MGI:1934969 PMID:11358868 | aorta morphogenesis | | ISO | RGD:1322646 | 1624291 | MGI:MGI:3055632|PMID:15363409 | RGD | MGI:MGI:3055632 PMID:15363409 | aorta morphogenesis | | IEA | Ensembl:ENSMUSP00000036591 | 1600115 | GO_REF:0000019 | ENSEMBL | GO_REF:0000019 | axial mesoderm development | | ISO | RGD:1322646 | 1624291 | MGI:MGI:2179442 | RGD | MGI:MGI:1934970 PMID:11358869 | axial mesoderm development | | IBA | PANTHER:PTN000215616 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | blood vessel development | | IBA | PANTHER:PTN000215616 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | cardiac right ventricle morphogenesis | | ISO | RGD:1322646 | 1624291 | MGI:MGI:3055632|PMID:15363409 | RGD | MGI:MGI:3055632 PMID:15363409 | cardiac right ventricle morphogenesis | | IEA | Ensembl:ENSMUSP00000036591 | 1600115 | GO_REF:0000019 | ENSEMBL | GO_REF:0000019 | cell migration involved in gastrulation | | IBA | PANTHER:PTN000215616 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | determination of left/right symmetry | | ISO | RGD:1322646 | 1624291 | MGI:MGI:2387775 | RGD | MGI:MGI:2652200 PMID:12642485 | embryonic heart tube anterior/posterior pattern specification | | ISO | RGD:1322646 | 1624291 | MGI:MGI:2179442 | RGD | MGI:MGI:3055632 PMID:15363409 | embryonic heart tube anterior/posterior pattern specification | | IBA | PANTHER:PTN000215616 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | floor plate formation | | IBA | PANTHER:PTN000215616 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | heart jogging | | IRD | PANTHER:PTN000215619 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | heart looping | | ISO | RGD:1322646 | 1624291 | MGI:MGI:3055632|PMID:15363409 | RGD | MGI:MGI:3055632 PMID:15363409 | heart looping | | IBA | PANTHER:PTN000215617 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | negative regulation of androgen receptor activity | | ISO | RGD:1322645 | 1624291 | PMID:16120611 | RGD | PMID:16120611 | negative regulation of androgen receptor activity | | IEA | Ensembl:ENSP00000366534 | 1600115 | GO_REF:0000019 | ENSEMBL | GO_REF:0000019 | negative regulation of androgen receptor signaling pathway | | ISO | RGD:1322645 | 1624291 | PMID:16120611 | RGD | PMID:16120611 | negative regulation of androgen receptor signaling pathway | | IEA | Ensembl:ENSP00000366534 | 1600115 | GO_REF:0000019 | ENSEMBL | GO_REF:0000019 | negative regulation of intracellular estrogen receptor signaling pathway | | ISO | RGD:1322645 | 1624291 | PMID:16120611 | RGD | PMID:16120611 | negative regulation of intracellular estrogen receptor signaling pathway | | IEA | Ensembl:ENSP00000366534 | 1600115 | GO_REF:0000019 | ENSEMBL | GO_REF:0000019 | negative regulation of transcription from RNA polymerase II promoter | | ISO | RGD:1322646 | 1624291 | MGI:MGI:95841 | RGD | MGI:MGI:3716271 PMID:17568773 | outflow tract morphogenesis | | ISO | RGD:1322646 | 1624291 | MGI:MGI:3055632|PMID:15363409 | RGD | MGI:MGI:3055632 PMID:15363409 | outflow tract morphogenesis | | IEA | Ensembl:ENSMUSP00000036591 | 1600115 | GO_REF:0000019 | ENSEMBL | GO_REF:0000019 | positive regulation of transcription from RNA polymerase II promoter | | ISO | RGD:1322646 | 1624291 | MGI:MGI:1321467|PMID:9858566 | RGD | MGI:MGI:1321467 PMID:9858566 | positive regulation of transcription from RNA polymerase II promoter | | ISO | RGD:1322646 | 1624291 | MGI:MGI:3055632|PMID:15363409 | RGD | MGI:MGI:3055632 PMID:15363409 | positive regulation of transcription from RNA polymerase II promoter | | IBA | PANTHER:PTN000215616 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | positive regulation of transcription from RNA polymerase II promoter | | ISO | RGD:1322645 | 1624291 | PMID:9702198 | RGD | PMID:9702198 | positive regulation of transcription from RNA polymerase II promoter | | ISO | RGD:1322646 | 1624291 | MGI:MGI:1328655|PMID:10349617 | RGD | MGI:MGI:1328655 PMID:10349617 | positive regulation of transcription, DNA-dependent | | ISO | RGD:1322646 | 1624291 | MGI:MGI:1328655|PMID:10349617 | RGD | MGI:MGI:1328655 PMID:10349617 | positive regulation of transcription, DNA-dependent | | ISO | RGD:1322645 | 1624291 | PMID:9702198 | RGD | PMID:9702198 | positive regulation of transcription, DNA-dependent | | ISO | RGD:1322645 | 1624291 | PMID:9389648 | RGD | PMID:9389648 | regulation of sequence-specific DNA binding transcription factor activity | | IBA | PANTHER:PTN000215024 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | regulation of transcription from RNA polymerase II promoter | | ISO | RGD:1322646 | 1624291 | MGI:MGI:1276222|PMID:9702197 | RGD | MGI:MGI:1276222 PMID:9702197 | regulation of transcription from RNA polymerase II promoter | | ISO | RGD:1322646 | 1624291 | MGI:MGI:3055632|PMID:15363409 | RGD | MGI:MGI:3055632 PMID:15363409 | secondary heart field specification | | ISO | RGD:1322646 | 1624291 | MGI:MGI:3055632|PMID:15363409 | RGD | MGI:MGI:3055632 PMID:15363409 | secondary heart field specification | | IEA | Ensembl:ENSMUSP00000036591 | 1600115 | GO_REF:0000019 | ENSEMBL | GO_REF:0000019 | specification of organ position | | IBA | PANTHER:PTN000215616 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | transforming growth factor beta receptor signaling pathway | | ISO | RGD:1322646 | 1624291 | MGI:MGI:1321467|PMID:9858566 | RGD | MGI:MGI:1321467 PMID:9858566 | transforming growth factor beta receptor signaling pathway | | IBA | PANTHER:PTN000215616 | 1600115 | GO_REF:0000033 | RefGenome | GO_REF:0000033 | transforming growth factor beta receptor signaling pathway | | ISO | RGD:1322646 | 1624291 | MGI:MGI:1328655|PMID:10349617 | RGD | MGI:MGI:1328655 PMID:10349617 | ventricular trabecula myocardium morphogenesis | | ISO | RGD:1322646 | 1624291 | MGI:MGI:3055632|PMID:15363409 | RGD | MGI:MGI:3055632 PMID:15363409 | ventricular trabecula myocardium morphogenesis | | IEA | Ensembl:ENSMUSP00000036591 | 1600115 | GO_REF:0000019 | ENSEMBL | GO_REF:0000019 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Pathway Annotations| External Database Links | |
| Pathway Interaction Database | Regulation of nuclear SMAD2/3 signaling (PID:200003) |
Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Molecular Pathway Annotations
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| External Database Links | |
| Pathway Interaction Database | Regulation of nuclear SMAD2/3 signaling (PID:200003) |
References - curated| 1. |
GOA data from the GO Consortium |
| 2. |
Massague J, etal., Genes Dev. 2005 Dec 1;19(23):2783-810. |
| 3. |
MGD data from the GO Consortium |
| 4. |
RGD automated import pipeline for gene-chemical interactions |
| 5. |
Ross S and Hill CS, Int J Biochem Cell Biol. 2008;40(3):383-408. Epub 2007 Oct 7. |
References - uncurated| PubMed | 12477932 |
RGD Disease Portals| Foxh1 has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| Foxh1 (Rattus norvegicus) |
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| FOXH1 (Homo sapiens) |
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| Foxh1 (Mus musculus) |
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Position Markers| Foxh1 |
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| AI045836 |
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| PMC313795P1 |
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QTLs in Region (RGSC Genome Assembly v3.4)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NM_001130493 | (Get FASTA) | Search GEO for Microarray Profiles |
| GenBank Nucleotide | AABR06051912 | (Get FASTA) | Search GEO for Microarray Profiles |
| AAHX01051644 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC158731 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH473950 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | XM_001075361 | ||||||||||
| RefSeq Status: | |||||||||||
| Type: | CODING | ||||||||||
| Position: |
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| RefSeq Acc Id: | XM_235454 | ||||||||||
| RefSeq Status: | |||||||||||
| Type: | CODING | ||||||||||
| Position: |
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| RefSeq Acc Id: | NM_001130493 | ||||||||||
| RefSeq Status: | VALIDATED | ||||||||||
| Type: | CODING | ||||||||||
| Protein Acc Id: | NP_001123965 | ||||||||||
| Position: |
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Protein Sequences| Protein RefSeqs | NP_001123965 | (Get FASTA) |
| GenBank Protein | AAI58732 | (Get FASTA) |
| EDM15950 | (Get FASTA) |
Strain Sequence Variants
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External Database Links| Database | Acc Id | Source(s) |
| Ensembl Genes | ENSRNOG00000015371 | ENTREZGENE, UniProtKB/TrEMBL |
| Ensembl Protein | ENSRNOP00000020696 | ENTREZGENE, UniProtKB/TrEMBL |
| Ensembl Transcript | ENSRNOT00000020696 | ENTREZGENE, UniProtKB/TrEMBL |
| Entrez Gene | 300054 | ENTREZGENE |
| Gene3D-CATH | Wing_hlx_DNA_bd | UniProtKB/TrEMBL |
| HomoloGene Group ID | 2914 | ENTREZGENE |
| IMAGE_CLONE | IMAGE:9092498 | IMAGE-MGC_LOAD |
| InterPro | TF_fork_head | UniProtKB/TrEMBL |
| TF_fork_head_CS | UniProtKB/TrEMBL | |
| WHTH_trsnscrt_rep_DNA-bd | UniProtKB/TrEMBL | |
| KEGG Report | rno:300054 | ENTREZGENE, UniProtKB/TrEMBL |
| MGC_CLONE | MGC:187890 | IMAGE-MGC_LOAD |
| Pfam | Fork_head | UniProtKB/TrEMBL |
| PRINTS | FORKHEAD | UniProtKB/TrEMBL |
| PROSITE | FORK_HEAD_2 | UniProtKB/TrEMBL |
| FORK_HEAD_3 | UniProtKB/TrEMBL | |
| SMART | SM00339 | UniProtKB/TrEMBL |
| UniGene | Rn.100970 | ENTREZGENE |
| Rn.233590 | ENTREZGENE | |
| UniProt | G3V7Y6_RAT | UniProtKB/TrEMBL |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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| 2008-04-30 | Foxh1 | forkhead box H1 | Foxh1_predicted | forkhead box H1 (predicted) | 'predicted' is removed | 24709 | APPROVED |
| 2005-01-12 | Foxh1_predicted | forkhead box H1 (predicted) | Symbol and Name status set to approved | 1724 | APPROVED |
| More on Foxh1 | |
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Entrez Gene |
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Ensembl Gene |
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NCBI Map Viewer |
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Vista |
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Vista + UCSC |
| RGD Object Information | |
| RGD ID: | 1311275 |
| Created: | 2005-01-12 |
| Species: | Rattus norvegicus |
| Last Modified: | 2013-04-16 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




