Gene: Vcl (vinculin) Rattus norvegicus
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Symbol: Vcl
Name: vinculin
Description: ENCODES a protein that exhibits Rho GTPase binding; alpha-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); apical junction assembly (ortholog); axon extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; Entamoeba histolyca infection pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Cardiomyopathies (ortholog); cardiomyopathy (ortholog); FOUND IN actin filament; focal adhesion; intercalated disc; INTERACTS WITH 1,3-dinitrobenzene; 2,6-dinitrotoluene; 2-methoxyethanol
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305679; metavinculin
Orthologs:
Homo sapiens (human) : VCL (vinculin)  HGNC  AGR
Mus musculus (house mouse) : Vcl (vinculin)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Vcl (vinculin)
Pan paniscus (bonobo/pygmy chimpanzee) : VCL (vinculin)
Canis lupus familiaris (dog) : VCL (vinculin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vcl (vinculin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0153,455,211 - 3,544,738 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0153,433,521 - 3,522,441 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4153,478,214 - 3,576,911 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1153,480,194 - 3,654,123 (-)NCBI
Celera151,235,777 - 1,325,408 (+)NCBI
Cytogenetic Map15p16NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Vcl
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1311217
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2017-11-07
Status: ACTIVE