Gene: Vcl (vinculin) Rattus norvegicus
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Symbol: Vcl
Name: vinculin
Description: ENCODES a protein that exhibits Rho GTPase binding; alpha-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); apical junction assembly (ortholog); axon extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; Entamoeba histolyca infection pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Cardiomyopathies (ortholog); cardiomyopathy (ortholog); FOUND IN actin filament; focal adhesion; intercalated disc; INTERACTS WITH 1,3-dinitrobenzene; 2,6-dinitrotoluene; 2-methoxyethanol
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305679; metavinculin
Orthologs:
Homo sapiens (human) : VCL (vinculin)  HGNC
Mus musculus (house mouse) : Vcl (vinculin)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Vcl (vinculin)
Pan paniscus (bonobo/pygmy chimpanzee) : VCL (vinculin)
Canis lupus familiaris (dog) : VCL (vinculin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vcl (vinculin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0153,455,211 - 3,544,738 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0153,433,521 - 3,522,441 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4153,478,214 - 3,576,911 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1153,480,194 - 3,654,123 (-)NCBI
Celera151,235,777 - 1,325,408 (+)NCBI
Cytogenetic Map15p16NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Vcl
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1311217
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2017-09-05
Status: ACTIVE