Gene: Lrrc4c (leucine rich repeat containing 4C) Rattus norvegicus
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Symbol: Lrrc4c
Name: leucine rich repeat containing 4C
Description: INVOLVED IN regulation of axonogenesis (ortholog); FOUND IN extracellular space (ortholog); membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: leucine-rich repeat-containing protein 4C; LOC311236; RGD1311013; similar to NAG14 protein
Orthologs:
Homo sapiens (human) : LRRC4C (leucine rich repeat containing 4C)  HGNC  AGR
Mus musculus (house mouse) : Lrrc4c (leucine rich repeat containing 4C)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Lrrc4c (leucine rich repeat containing 4C)
Pan paniscus (bonobo/pygmy chimpanzee) : LRRC4C (leucine rich repeat containing 4C)
Canis lupus familiaris (dog) : LRRC4C (leucine rich repeat containing 4C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lrrc4c (leucine rich repeat containing 4C)
more info ...
Allele / Splice: Lrrc4cTn(sb-T2/Bart3)2.224Mcwi   Lrrc4cTn(sb-T2/Bart3)2.254Mcwi  
Genetic Models: F344-Lrrc4cTn(sb-T2/Bart3)2.224Mcwi F344-Lrrc4cTn(sb-T2/Bart3)2.254Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly; Note: This gene aligns across a gap in the Rnor_6.0 reference genome assembly, and therefore, annotation of this gene is split across NW_007905762.1 and NW_007905761.1 in NCBI's Rattus norvegicus Annotation Release 105. [19 Jun 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0385,421,169 - 86,821,783 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0392,537,591 - 92,682,037 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0393,268,661 - 93,502,229 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0392,119,546 - 92,392,069 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4380,921,606 - 82,413,671 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1382,143,382 - 82,309,562 (+)NCBI
Celera381,468,604 - 82,840,791 (+)NCBICelera
Cytogenetic Map3q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Lrrc4c
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311013
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE