Naa50 (N(alpha)-acetyltransferase 50, NatE catalytic subunit) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Naa50 (N(alpha)-acetyltransferase 50, NatE catalytic subunit) Rattus norvegicus
Analyze
Symbol: Naa50
Name: N(alpha)-acetyltransferase 50, NatE catalytic subunit
RGD ID: 1310944
Description: Predicted to enable protein-N-terminal amino-acid acetyltransferase activity and protein-lysine-acetyltransferase activity. Predicted to be involved in mitotic sister chromatid cohesion. Predicted to be part of NatA complex. Orthologous to human NAA50 (N-alpha-acetyltransferase 50, NatE catalytic subunit); INTERACTS WITH (+)-schisandrin B; 3-chloropropane-1,2-diol; alpha-Zearalanol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC102553099; LOC288108; Mak3; Mak3 homolog; Mak3 homolog (S. cerevisiae); MGC189357; N-acetyltransferase 13; N-alpha-acetyltransferase 50; N-alpha-acetyltransferase 50, NatE catalytic subunit; N-alpha-acetyltransferase 50-like; Nat13
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81170,044,281 - 70,066,754 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1170,044,281 - 70,066,754 (-)EnsemblGRCr8
mRatBN7.21156,538,366 - 56,560,842 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,538,366 - 56,560,842 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1165,351,540 - 65,374,017 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01158,013,772 - 58,036,254 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01157,062,496 - 57,085,000 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1171,963,170 - 71,985,647 (-)NCBI
Lyon_Normotensive1170,146,404 - 70,168,881 (-)NCBI
Lyon_Hypertensive1171,090,814 - 71,113,291 (-)NCBI
F344_StmMcwi1169,887,847 - 69,910,325 (-)NCBI
Rnor_6.01161,508,162 - 61,530,830 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,466,962 - 61,470,348 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl1161,462,994 - 61,530,837 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.01165,614,950 - 65,637,732 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41158,103,982 - 58,126,566 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1156,091,522 - 56,113,995 (-)NCBICelera
RGSC_v3.11158,165,242 - 58,184,158 (-)NCBI
Cytogenetic Map11q21NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(-)-demecolcine  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
alpha-Zearalanol  (EXP)
amitrole  (EXP)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
clofibrate  (ISO)
cobalt dichloride  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
decabromodiphenyl ether  (EXP)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dioxygen  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
ethyl methanesulfonate  (ISO)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
ivermectin  (ISO)
lipopolysaccharide  (ISO)
methimazole  (EXP)
methyl methanesulfonate  (ISO)
nefazodone  (EXP)
nimesulide  (EXP)
nitrates  (ISO)
ozone  (ISO)
p-toluidine  (EXP)
paracetamol  (ISO)
perfluorooctanoic acid  (EXP)
permethrin  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
Pyridostigmine bromide  (ISO)
rotenone  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
succimer  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
toluene  (EXP)
triptonide  (ISO)
triticonazole  (EXP)
valproic acid  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA,ISO)
cytosol  (IEA,ISO)
NatA complex  (IBA,IEA,ISO)
nucleolus  (IEA,ISO)
nucleus  (IEA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:16507339   PMID:17502424   PMID:19056867   PMID:19744929   PMID:21900231   PMID:22311970   PMID:23376485   PMID:25732826   PMID:27422821   PMID:27484799  


Genomics

Comparative Map Data
Naa50
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81170,044,281 - 70,066,754 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1170,044,281 - 70,066,754 (-)EnsemblGRCr8
mRatBN7.21156,538,366 - 56,560,842 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,538,366 - 56,560,842 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1165,351,540 - 65,374,017 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01158,013,772 - 58,036,254 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01157,062,496 - 57,085,000 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1171,963,170 - 71,985,647 (-)NCBI
Lyon_Normotensive1170,146,404 - 70,168,881 (-)NCBI
Lyon_Hypertensive1171,090,814 - 71,113,291 (-)NCBI
F344_StmMcwi1169,887,847 - 69,910,325 (-)NCBI
Rnor_6.01161,508,162 - 61,530,830 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,466,962 - 61,470,348 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl1161,462,994 - 61,530,837 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.01165,614,950 - 65,637,732 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41158,103,982 - 58,126,566 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1156,091,522 - 56,113,995 (-)NCBICelera
RGSC_v3.11158,165,242 - 58,184,158 (-)NCBI
Cytogenetic Map11q21NCBI
NAA50
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383113,716,458 - 113,746,249 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3113,716,458 - 113,746,786 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh373113,435,305 - 113,465,096 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363114,920,531 - 114,947,786 (-)NCBIBuild 36Build 36hg18NCBI36
Build 343114,920,530 - 114,947,786NCBI
Celera3111,846,332 - 111,873,586 (-)NCBICelera
Cytogenetic Map3q13.31NCBI
HuRef3110,810,207 - 110,840,018 (-)NCBIHuRef
CHM1_13113,398,653 - 113,428,466 (-)NCBICHM1_1
T2T-CHM13v2.03116,437,658 - 116,467,450 (-)NCBIT2T-CHM13v2.0
Naa50
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391643,960,154 - 43,983,825 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1643,959,513 - 43,983,885 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381644,139,791 - 44,163,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1644,139,830 - 44,163,366 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv371644,139,922 - 44,163,477 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361644,059,141 - 44,082,696 (+)NCBIMGSCv36mm8
Celera1644,497,008 - 44,520,827 (+)NCBICelera
Cytogenetic Map16B4NCBI
cM Map1628.47NCBI
Naa50
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542713,845,806 - 13,868,321 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_00495542713,845,806 - 13,868,323 (-)NCBIChiLan1.0ChiLan1.0
NAA50
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22111,714,482 - 111,741,982 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13111,719,261 - 111,746,737 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03110,860,595 - 110,888,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13117,781,455 - 117,808,913 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3117,781,455 - 117,808,913 (-)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
NAA50
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3318,111,480 - 18,139,497 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03318,253,597 - 18,281,699 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3318,253,597 - 18,281,720 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13318,057,364 - 18,085,408 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03318,104,745 - 18,132,483 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03318,655,841 - 18,683,924 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Naa50
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap13153,461,663 - 153,496,012 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_024405602136,264,699 - 136,285,768 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365361,221,080 - 1,257,263 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365361,221,080 - 1,257,196 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAA50
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13146,193,231 - 146,222,133 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.113146,193,186 - 146,217,739 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213155,778,467 - 155,802,802 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NAA50
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap12233,442,346 - 33,471,163 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366604199,328,044 - 99,356,888 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.12267,113,126 - 67,142,391 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2267,113,123 - 67,139,627 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Naa50
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473134,781,120 - 34,808,863 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_00462473134,781,157 - 34,808,265 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl269,376,754 - 69,402,482 (+)Ensembl
Naa50
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1429,033,346 - 29,052,285 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in Naa50
176 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:609
Count of miRNA genes:261
Interacting mature miRNAs:332
Transcripts:ENSRNOT00000059666, ENSRNOT00000068345
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)114644316891443168Rat
1598841Memor7Memory QTL 7exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)113330600878306008Rat
1598811Bp291Blood pressure QTL 2911.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113330600878306008Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)115892833699753367Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)113191546976915469Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)115893182292356038Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)115441539196071021Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)113461876079618760Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)115775483796071021Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)116796218499753367Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)116859932196497754Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)116985594399753367Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)115107102196071021Rat
631510Spl2Serum phospholipid level QTL 24.1blood phospholipid amount (VT:0006084)serum phospholipid level (CMO:0001171)112755668572556685Rat

Markers in Region
AI175556  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21156,539,375 - 56,539,513 (+)MAPPERmRatBN7.2
Rnor_6.01161,509,172 - 61,509,309NCBIRnor6.0
Rnor_6.01161,464,108 - 61,464,245NCBIRnor6.0
Rnor_5.01165,571,022 - 65,571,159UniSTSRnor5.0
Rnor_5.01165,616,064 - 65,616,201UniSTSRnor5.0
RGSC_v3.41158,105,096 - 58,105,233UniSTSRGSC3.4
Celera1156,092,532 - 56,092,669UniSTS
Cytogenetic Map11q21UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
276 156 730 1591 4066 1011 1727 133 874 490 856 156 5392 2592 449 3979 38 1393 741 908 160 158

Sequence


Ensembl Acc Id: ENSRNOT00000059666   ⟹   ENSRNOP00000056418
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1156,541,204 - 56,560,842 (-)Ensembl
Rnor_6.0 Ensembl1161,510,994 - 61,530,830 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000068345   ⟹   ENSRNOP00000061273
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1170,044,281 - 70,066,754 (-)Ensembl
mRatBN7.2 Ensembl1156,538,366 - 56,560,842 (-)Ensembl
Rnor_6.0 Ensembl1161,462,994 - 61,530,837 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000073436   ⟹   ENSRNOP00000066920
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1161,466,962 - 61,470,046 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000076277   ⟹   ENSRNOP00000068286
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1161,511,969 - 61,530,567 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000083841   ⟹   ENSRNOP00000071756
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1161,466,962 - 61,470,348 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098332   ⟹   ENSRNOP00000089489
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1170,044,281 - 70,062,337 (-)Ensembl
mRatBN7.2 Ensembl1156,538,366 - 56,556,425 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000104295   ⟹   ENSRNOP00000080534
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1170,044,281 - 70,066,411 (-)Ensembl
mRatBN7.2 Ensembl1156,538,366 - 56,560,372 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117963   ⟹   ENSRNOP00000079703
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1170,044,281 - 70,051,189 (-)Ensembl
mRatBN7.2 Ensembl1156,538,366 - 56,546,295 (-)Ensembl
RefSeq Acc Id: NM_001105881   ⟹   NP_001099351
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,044,281 - 70,066,754 (-)NCBI
mRatBN7.21156,538,366 - 56,560,842 (-)NCBI
Dahl_SR_JrHsd1171,963,170 - 71,985,647 (-)NCBI
Lyon_Normotensive1170,146,404 - 70,168,881 (-)NCBI
Lyon_Hypertensive1171,090,814 - 71,113,291 (-)NCBI
F344_StmMcwi1169,887,847 - 69,910,325 (-)NCBI
Rnor_6.01161,508,162 - 61,530,830 (-)NCBI
Rnor_5.01165,614,950 - 65,637,732 (-)NCBI
RGSC_v3.41158,103,982 - 58,126,566 (-)RGD
Celera1156,091,522 - 56,113,995 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001309804   ⟹   NP_001296733
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,047,118 - 70,066,754 (-)NCBI
mRatBN7.21156,541,203 - 56,560,842 (-)NCBI
Dahl_SR_JrHsd1171,966,007 - 71,985,647 (-)NCBI
Lyon_Normotensive1170,149,241 - 70,168,881 (-)NCBI
Lyon_Hypertensive1171,093,651 - 71,113,291 (-)NCBI
F344_StmMcwi1169,890,684 - 69,910,325 (-)NCBI
Rnor_6.01161,511,003 - 61,530,830 (-)NCBI
Celera1156,094,359 - 56,113,995 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001099351 (Get FASTA)   NCBI Sequence Viewer  
  NP_001296733 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI69000 (Get FASTA)   NCBI Sequence Viewer  
  EDM11167 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000061273
  ENSRNOP00000061273.1
  ENSRNOP00000079703.2
  ENSRNOP00000080534.1
  ENSRNOP00000089489.1
RefSeq Acc Id: NP_001099351   ⟸   NM_001105881
- Peptide Label: isoform 2
- UniProtKB: D4A5Y6 (UniProtKB/TrEMBL),   A0A8I6A8V0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001296733   ⟸   NM_001309804
- Peptide Label: isoform 1
- UniProtKB: B5DFB7 (UniProtKB/TrEMBL),   F1M272 (UniProtKB/TrEMBL),   A0A8I6A8V0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000056418   ⟸   ENSRNOT00000059666
Ensembl Acc Id: ENSRNOP00000061273   ⟸   ENSRNOT00000068345
Ensembl Acc Id: ENSRNOP00000068286   ⟸   ENSRNOT00000076277
Ensembl Acc Id: ENSRNOP00000066920   ⟸   ENSRNOT00000073436
Ensembl Acc Id: ENSRNOP00000071756   ⟸   ENSRNOT00000083841
Ensembl Acc Id: ENSRNOP00000079703   ⟸   ENSRNOT00000117963
Ensembl Acc Id: ENSRNOP00000089489   ⟸   ENSRNOT00000098332
Ensembl Acc Id: ENSRNOP00000080534   ⟸   ENSRNOT00000104295
Protein Domains
N-acetyltransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K1A0-F1-model_v2 AlphaFold A0A0G2K1A0 1-169 view protein structure
AF-B5DFB7-F1-model_v2 AlphaFold B5DFB7 1-169 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698151
Promoter ID:EPDNEW_R8676
Type:initiation region
Name:Naa50_1
Description:N-acetyltransferase 50, NatE catalytic subunit
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01161,530,822 - 61,530,882EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310944 AgrOrtholog
BioCyc Gene G2FUF-21341 BioCyc
Ensembl Genes ENSRNOG00000039017 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000049740 Ensembl
Ensembl Transcript ENSRNOT00000068345 ENTREZGENE
  ENSRNOT00000068345.5 UniProtKB/TrEMBL
  ENSRNOT00000098332.2 UniProtKB/TrEMBL
  ENSRNOT00000104295.2 UniProtKB/TrEMBL
  ENSRNOT00000117963.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.630.30 UniProtKB/TrEMBL
InterPro AcTrfase_GCN5-related_dom UniProtKB/TrEMBL
  Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  N-term/lysine_N-AcTrnsfr UniProtKB/TrEMBL
KEGG Report rno:288108 UniProtKB/TrEMBL
NCBI Gene 288108 ENTREZGENE
PANTHER N-ALPHA-ACETYLTRANSFERASE UniProtKB/TrEMBL
  N-ALPHA-ACETYLTRANSFERASE 50 UniProtKB/TrEMBL
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PhenoGen Naa50 PhenoGen
PROSITE GNAT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000039017 RatGTEx
  ENSRNOG00000049740 RatGTEx
Superfamily-SCOP Acyl_CoA_acyltransferase UniProtKB/TrEMBL
UniProt A0A8I5ZQ10_RAT UniProtKB/TrEMBL
  A0A8I6A8V0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G5M7_RAT UniProtKB/TrEMBL
  B5DFB7 ENTREZGENE, UniProtKB/TrEMBL
  D4A5Y6 ENTREZGENE, UniProtKB/TrEMBL
  F1M272 ENTREZGENE
UniProt Secondary F1M272 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Naa50  N(alpha)-acetyltransferase 50, NatE catalytic subunit  LOC102553099  N-alpha-acetyltransferase 50-like  Data merged from RGD:7711915 737654 PROVISIONAL
2013-12-18 LOC102553099  N-alpha-acetyltransferase 50-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-02-27 Naa50  N(alpha)-acetyltransferase 50, NatE catalytic subunit  Nat13  N-acetyltransferase 13  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Nat13  N-acetyltransferase 13  Mak3_predicted  Mak3 homolog (S. cerevisiae) (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Mak3_predicted  Mak3 homolog (S. cerevisiae) (predicted)      Symbol and Name status set to approved 70820 APPROVED