Zbtb21 (zinc finger and BTB domain containing 21)

Gene: Zbtb21 (zinc finger and BTB domain containing 21) Rattus norvegicus

Analyze

Symbol:

Zbtb21

Name:

zinc finger and BTB domain containing 21

RGD ID:

1310841

Description:

Predicted to enable several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; POZ domain binding activity; and methyl-CpG binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in nucleus. Orthologous to human ZBTB21 (zinc finger and BTB domain containing 21); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC304056; Zfp295; zinc finger and BTB domain-containing protein 21; zinc finger protein 295; Znf295

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	50,781,697 - 50,796,399 (-)	NCBI		GRCr8
mRatBN7.2	11	37,312,337 - 37,327,040 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	37,312,378 - 37,326,996 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	46,012,721 - 46,027,376 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	38,684,112 - 38,698,767 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	37,844,073 - 37,858,728 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	38,442,716 - 38,457,411 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	38,442,742 - 38,457,373 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	41,952,579 - 41,967,272 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	37,960,562 - 37,973,333 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	38,017,645 - 38,030,920 (-)	NCBI
Celera	11	37,198,647 - 37,211,419 (-)	NCBI		Celera
Cytogenetic Map	11	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cataract 9 multiple types (ISO)

developmental and epileptic encephalopathy 30 (ISO)

genetic disease (ISO)

homocystinuria (ISO)

Neurodevelopmental Disorders (ISO)

primary ciliary dyskinesia (ISO)

progressive myoclonus epilepsy (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

15-acetyldeoxynivalenol (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-palmitoylglycerol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

antimycin A (ISO)

arsenous acid (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

deoxynivalenol (ISO)

diarsenic trioxide (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethyl methanesulfonate (ISO)

FR900359 (ISO)

genistein (ISO)

gentamycin (EXP)

gold atom (ISO)

gold(0) (ISO)

indole-3-methanol (EXP)

leflunomide (ISO)

metformin (ISO)

methyl methanesulfonate (ISO)

nickel atom (ISO)

paracetamol (EXP,ISO)

phenobarbital (ISO)

propiconazole (ISO)

quercetin (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

T-2 toxin (ISO)

tetrachloromethane (EXP,ISO)

thapsigargin (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

torcetrapib (ISO)

trichostatin A (ISO)

Triptolide (ISO)

tunicamycin (ISO)

urethane (ISO)

valproic acid (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of DNA-templated transcription (IBA)

negative regulation of transcription by RNA polymerase II (ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

cytosol (ISO)

nucleoplasm (ISO)

nucleus (IBA,ISO)

Molecular Function

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (ISO)

identical protein binding (ISO)

methyl-CpG binding (ISO)

POZ domain binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15629158	PMID:21029866

Genomics

Comparative Map Data

Zbtb21
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	50,781,697 - 50,796,399 (-)	NCBI		GRCr8
mRatBN7.2	11	37,312,337 - 37,327,040 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	37,312,378 - 37,326,996 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	46,012,721 - 46,027,376 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	38,684,112 - 38,698,767 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	37,844,073 - 37,858,728 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	38,442,716 - 38,457,411 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	38,442,742 - 38,457,373 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	41,952,579 - 41,967,272 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	37,960,562 - 37,973,333 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	38,017,645 - 38,030,920 (-)	NCBI
Celera	11	37,198,647 - 37,211,419 (-)	NCBI		Celera
Cytogenetic Map	11	q12	NCBI

ZBTB21
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	41,986,831 - 42,010,360 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	41,986,831 - 42,010,387 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	43,406,940 - 43,430,469 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	42,280,009 - 42,303,565 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	21	42,280,008 - 42,303,519	NCBI
Celera	21	28,554,479 - 28,578,036 (-)	NCBI		Celera
Cytogenetic Map	21	q22.3	NCBI
HuRef	21	28,824,422 - 28,847,984 (-)	NCBI		HuRef
CHM1_1	21	42,967,781 - 42,991,342 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	21	40,377,057 - 40,400,598 (-)	NCBI		T2T-CHM13v2.0

Zbtb21
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	97,746,993 - 97,763,850 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	97,744,557 - 97,763,822 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	97,945,795 - 97,962,627 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	97,943,357 - 97,962,622 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	98,168,599 - 98,183,786 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	98,103,856 - 98,117,095 (-)	NCBI		MGSCv36	mm8
Celera	16	98,999,188 - 99,014,381 (-)	NCBI		Celera
Cytogenetic Map	16	C4	NCBI
cM Map	16	57.75	NCBI

Zbtb21
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	39,584,146 - 39,599,381 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955407	39,583,998 - 39,599,381 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZBTB21
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	38,057,618 - 38,082,147 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	32,911,801 - 32,935,772 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	28,310,177 - 28,333,713 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	41,633,208 - 41,656,714 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	41,633,208 - 41,656,714 (-)	Ensembl	panpan1.1		panPan2

ZBTB21
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	36,378,200 - 36,394,894 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	36,379,566 - 36,394,911 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	35,527,041 - 35,546,651 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	35,892,390 - 35,912,002 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	35,894,361 - 35,912,817 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	35,785,769 - 35,793,200 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	35,765,471 - 35,785,062 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	36,260,200 - 36,279,825 (-)	NCBI		UU_Cfam_GSD_1.0

Zbtb21
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	35,619,647 - 35,640,036 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	1,827,750 - 1,848,472 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	1,827,785 - 1,848,176 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZBTB21
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	205,349,805 - 205,353,008 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	205,345,675 - 205,365,151 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	215,671,579 - 215,698,593 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZBTB21
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	85,871,708 - 85,894,964 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	85,875,805 - 85,879,005 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	13,731,642 - 13,754,899 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zbtb21
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624745	28,313,042 - 28,329,497 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624745	28,304,795 - 28,329,497 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Zbtb21
15 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	243
Count of miRNA genes:	163
Interacting mature miRNAs:	182
Transcripts:	ENSRNOT00000041177
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	1	69446234	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	1041931	66113562	Rat
1641927	Alcrsp10	Alcohol response QTL 10			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	11	8436674	53436674	Rat
724517	Uae18	Urinary albumin excretion QTL 18	3.7		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	16472047	44285911	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	18976208	86241447	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	22959403	67959403	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	23280456	68280456	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	23280456	68280456	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	27672410	82846715	Rat
1300130	Rf20	Renal function QTL 20	4.44		kidney glomerulus integrity trait (VT:0010546)	kidney glomerulus diameter (CMO:0001166)	11	29528418	60324829	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	29528418	82566702	Rat
2298551	Neuinf10	Neuroinflammation QTL 10	3.7		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	11	31239134	78851519	Rat
70180	BpQTLcluster10	Blood pressure QTL cluster 10	3.19		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	11	34918041	79918041	Rat

Markers in Region

UniSTS:234008

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	37,312,186 - 37,312,389 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	38,442,563 - 38,442,764	NCBI	Rnor6.0
Rnor_5.0	11	41,952,426 - 41,952,627	UniSTS	Rnor5.0
Celera	11	37,196,610 - 37,196,812	UniSTS
Cytogenetic Map	11	q12	UniSTS

BF403709

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	37,313,466 - 37,313,618 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	38,443,842 - 38,443,993	NCBI	Rnor6.0
Rnor_5.0	11	41,953,705 - 41,953,856	UniSTS	Rnor5.0
Celera	11	37,197,890 - 37,198,041	UniSTS
RH 3.4 Map	11	266.5	UniSTS
Cytogenetic Map	11	q12	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		4	19	4	15	4			74	22	35	11
Low	3	39	38	37	4	37	8	11		13	6		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001401434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000041177 ⟹ ENSRNOP00000049174

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	37,314,224 - 37,326,996 (-)	Ensembl
Rnor_6.0 Ensembl	11	38,442,742 - 38,457,373 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000102067 ⟹ ENSRNOP00000076506

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	37,314,571 - 37,326,996 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000116969 ⟹ ENSRNOP00000079938

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	37,312,378 - 37,326,980 (-)	Ensembl

RefSeq Acc Id:

NM_001107105 ⟹ NP_001100575

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,701 - 50,796,356 (-)	NCBI
mRatBN7.2	11	37,312,341 - 37,326,996 (-)	NCBI
Rnor_6.0	11	38,444,603 - 38,457,375 (-)	NCBI
Rnor_5.0	11	41,952,579 - 41,967,272 (-)	NCBI
RGSC_v3.4	11	37,960,562 - 37,973,333 (-)	RGD
Celera	11	37,198,647 - 37,211,419 (-)	RGD

Sequence:

show sequence

ATGACGTCAAATTCAAGATGGATGGAATCACAGCGGCAGCGGAGGCTGCGGGTTGCGCGAGCGG
AGTGTGAGCGGAAAGGGGCTTGGCGCCTGCCCCAGGGCTGAAGAGCGGTGAGTAACCGTCACGC
TCCGCGCCCTAGGAGGACGTCGGGCCCTGTCCGGGCTACGGCCTCTCTGCAAAACGCGGCCTTT
CCTGACGTAACTCTGAGTCACAGGAATGTGAGGTGCAGGAGAACAGGAAGCCAGCCAACGAGCT
CACCTCCCATCATCAGCACCTCTTATGATGCACAGTGTACAGCGGGCTCACAAACACTCGGGAG
AGGAAGAGAGAAGAAAGATGTGTGCTTGCCAGATAAACTGCAGAATGGAGGGACTACTGCATTA
CATCAACCCAGCACATGCCATCTCTCTGCTCAGTGCCCTCAATGAGGAGCGCCTCAAGGGACAG
CTGTGTGACGTGCTCCTGATTGTTGGAGACCAGAAGTTCCGAGCTCATAAGAACGTCTTGGCTG
CCAGCAGTGAGTACTTCCAGAGTTTATTCACGAATAAGGAGAACGAGGCTCAGACTGTCTTTCA
GCTGGACTTCTGTGAGCCTGATGCTTTTGACAACGTTCTGAACTACATTTACTCTTCTTCCCTC
TTTGTGGAGAAGGGCAGCCTTGCTGCTGTGCAGGAGCTGGGGTATAGCCTTGGTATCTCCTTCC
TGACCAACATCGTTGCCAAAGCCCCTCAGGCTCCTTTTCCAGCCTGTCCCAACAGGAAAAGAGT
GCCAGTGGAAGATGATGAAACCACCTCTCAAAAGCGAAGTGTCATTGTATGTCAGGGCAGGAGC
GAAGTGCCAGGGAAAGCCAGTGGTCCAGCCATGCAGGACCTTAGCCATGCTGCCCGAGCCTCCC
CCAGTGGTTCAGTCAAGACCAGCACCAGTAAGCCACATGTGGCCAAGCCACCAGAGCAGCTTCA
TAGTCTGTCCTTAACTGAAAAGAGCTGGACAAAGGAGAGTGCTGCAGTCTATGCAAAGTCTCTG
GAACAGCCTGGGGCTTTGGATGATCCTAATAGGGGCAGTTTGGTAAAGAGAACTACAGTCCTGC
CCCCAAAGCCTTCACAGGACAGAGAGGCCACAGATGATAAACCAGGGGTGAGCAGCCAGCTTCC
CAAGGGGAAAGCTATAGAACTGGCACTGAAGAGACCACGGCCCCCCGTTCTGTCTCTTCATAGC
TCATCAGAGACTCCATATCTCTTAAAAGAAACTAGCAAAGGAGGCGGTCAGGGGGAGGATAGGA
ACTTGCTCTACTACTCTAAGCTAGGGCTGGTGGTCCCATCTGGTGGTCCTGCTTCTGCAAACCA
GAGCATTGACAGAAGTGGCCCACTAGTGAAAAGCCTCCTCAGGCGGTCACTATCTATGGACAGC
CAGGTTCCTGTTTACTCCCCCTCCTTAGATTTGAAGTCATCCCAGGGATCATCCTCAGCGGCAA
ATGAGGCACCGGGCAGTGTGTTCTGTGCGATGTCTCAAAAGTCATCCTTAAAAGATTGCAGTGA
AAAAAAAGTCCTGGATGACAGGCCTCAAGTGCTCCAGCCTCATCGCCTCAGGTCCTTTAGTGCT
TCTCAGTCGACAGACAGGGAGGAGGCCTCCCCTGTGACTGAGGTACGCATTAAGACGGAGCCCA
GCAGCCCACTTTCGGACCCCTCAGACATCATCCGGGTCACTGTGGGAGGAGATGCAGCAGCAGC
AGCCGCCACGAGAGAGCTGCCCCTCAAAACAGAGGAAGACCAGAGAGATATGAGCAGACTCCCG
GCAAAGAGAAGGTTCCAGACAGACAGAAGGTCACCCTTGAAGAAGCCAAAGGCAAATGAACACG
GGCCTGCTGTCTCAGAAGAGAACTGTGAAGAGGGCAGGAGCCCTCCTTCCCTTGACAGCAACTT
CCCAGATTCTGACTTAAACAGAGAGGAGTTTGAGCAAGGCAACCACGAGCGCTTGTGCCGGAAC
GCCACCGTTTGCCCTTACTGCAGCCTCAGGTTCTTCTCCCCCGCGCTGAAGCAGGAACATGAGG
ACAGGTGTGAGTACAAAAAGCTGACTTGCCTGGAGTGCATGCGCACCTTCAAGTCCTCCTTCAG
CATCTGGCGGCACCAGGTGGAAGTGCATAACCAGAACAACATGGCTTTAGCAGAGAACTTCTCC
ATGCCCACCCTGGACCACAACGGTGAAGTGGCAGCTGCTTCCAGGCCTCAGACTGAGCCCAGCA
AGGTAAACCATGTGGCCACTCCGAAAGAGGATACGGCATTTAGCGACTCTTCAGAACAAGTGAA
CTTCGATTCTGAGGATTCCTCCTGCCTCCCTGAAGACTTGAGTCTTTCAAAGCAACTGAAAGTC
CAAGTCAAAGAGGAGCCTGTGGAGGAGGCTGAGGAGGAGGCTCCTGAGGTTAGCGCAGCTCCCA
GGGAGGCCGGCCCCAGCAAGGAGGCCGGCCTATGGCCCTGTGAGAAATGCGGAAAGATGTTCAC
GGCACACAAGCAGCTGGAGCGGCACCAGGAGCTGCTGTGTTCCGTGAAGCCCTTCATCTGCCAC
GTATGCCACAAAGCCTTCCGTACCAACTTCCGGCTCTGGAGTCACTTCCAGTCCCACATGTCTC
AGGCTACAGAGGAGCCTGTGCAGAAAGAGCCTGAGGTGTGTCCTGTGCCCACAAACTCCCCCTC
ACCACCACCTCTGCCACCTCCACCACCCTTGCCCAAGATTCAGCCCCTGGAGCCCGACAGCCCC
ACAGGCCTGCCTGAGAACCCAGCCCCAGCTACAGAGAAGCTCTTTGCACCCCAGGAGTCAGATA
CCCTATTCTACCACGCCCCGCCCCTTTCAGCAATCACATTTAAGAGACAGTTCATGTGCAAGCT
CTGCCACAGGACATTCAAGACGGCCTTCAGCCTTTGGAGTCATGAGCAGACACACAATTAAAGG
GCCTCCCCTTCACCTGTCGCAAAGCAGCAGGCCCTCAGCTTGTGAACTGTGTCCTAAGACAGAA
TATTTGATAAAAATAATAAAGGTTGGAAATTTTTATGTTTGAATTTAAGTTTGGGATGAATTAC
TATTGGCTAGGAATGACCTCACAGTTTTCTGGACCTCAGCAGCAGGGGTTGGATTCTATTACTC
TTGAAGTTGGGTTAATGTTGGTGATTAAGGTTTTTGGTTTCTGGGTAGTGGGATGCTGGGAAGA
GGTTTTTTTTGGTTTTGGTTTTGGGTTTGTTTTTGTTTTCTGATTATTGCAGACACCTAAGTTT
GAGGTAACCCTTAGCCATGTTTTTAAGGCCAAAAACATACAAGGAAGAAGAGGAGTCATTTGCA
GTATTGAGTCAGATTTTAGAATACTTTAGCAATAAGAAAAGCCAAGCCCCAACTTTAGTAAATT
ATCCTGACACTTG

hide sequence

RefSeq Acc Id:

NM_001401434 ⟹ NP_001388363

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,701 - 50,796,356 (-)	NCBI
mRatBN7.2	11	37,312,341 - 37,326,996 (-)	NCBI

RefSeq Acc Id:

XM_006248167 ⟹ XP_006248229

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,141 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,326,781 (-)	NCBI
Rnor_6.0	11	38,442,716 - 38,457,160 (-)	NCBI
Rnor_5.0	11	41,952,579 - 41,967,272 (-)	NCBI

Sequence:

show sequence

TCTCTCCTTTTTTTCCTCCACCAGTGGGTTGCGGGCGTCGGGCCCTTTTACGCGTGCGCGGGGC
CGCGGTCCTTACAGAGCATGCCCAGACTCCCACGTAGCCCTATGTGTCCTTGCACTGCGCATGC
TCTGTGCCCGCATTTGGCCTCACCCTCGCTCCTACGCATGCTCAGCCTCCAGGCCGCTGAGCTA
CTCACCCTGGCCGGGGCGGCCTGAGTAACCGCGGTATGGGTCTGGGGCGCTGGCCACAGCAGAG
CCGTTGAGACGCGGCTGCGGGCAAGGGCGCGCTCTCTGGGCTGGGTGGCGCGCGCTCGCGCGGG
GCCGGGAAACTGGTGGGCGGTGGCGGCACCCACACCTGCCGCGGCTGGAGCGTGACAGCCTGGC
AGCCAGCACCTCCGCGGCCACCTCCTTAGCCCATGCAGACCTTATCGTACTCCCCACCCCGACC
CTCGGGCCCGAGGCTTTTCTTAGGAAAAAGACCCTCCTCCGGGGACATAGCACGGAAGACCTCC
CTACAGCTCACATCTTGGCCGGGTCTCCCCATCTCACAGGCTTGGTTATTTGGAGCACCTTTGA
GTGCCCCTCTGCAGAGACTGCACCTTGTAACCATGCACTTGTGCGTCCCTGAGGCTCTTGGTTC
TGGAGAACCGCACACTGCAGCACGTGTACAGAGAGCCTTAAGCAGTCACAGGAATGTGAGGTGC
AGGAGAACAGGAAGCCAGCCAACGAGCTCACCTCCCATCATCAGCACCTCTTATGATGCACAGT
GTACAGCGGGCTCACAAACACTCGGGAGAGGAAGAGAGAAGAAAGATGTGTGCTTGCCAGATAA
ACTGCAGAATGGAGGGACTACTGCATTACATCAACCCAGCACATGCCATCTCTCTGCTCAGTGC
CCTCAATGAGGAGCGCCTCAAGGGACAGCTGTGTGACGTGCTCCTGATTGTTGGAGACCAGAAG
TTCCGAGCTCATAAGAACGTCTTGGCTGCCAGCAGTGAGTACTTCCAGAGTTTATTCACGAATA
AGGAGAACGAGGCTCAGACTGTCTTTCAGCTGGACTTCTGTGAGCCTGATGCTTTTGACAACGT
TCTGAACTACATTTACTCTTCTTCCCTCTTTGTGGAGAAGGGCAGCCTTGCTGCTGTGCAGGAG
CTGGGGTATAGCCTTGGTATCTCCTTCCTGACCAACATCGTTGCCAAAGCCCCTCAGGCTCCTT
TTCCAGCCTGTCCCAACAGGAAAAGAGTGCCAGTGGAAGATGATGAAACCACCTCTCAAAAGCG
AAGTGTCATTGTATGTCAGGGCAGGAGCGAAGTGCCAGGGAAAGCCAGTGGTCCAGCCATGCAG
GACCTTAGCCATGCTGCCCGAGCCTCCCCCAGTGGTTCAGTCAAGACCAGCACCAGTAAGCCAC
ATGTGGCCAAGCCACCAGAGCAGCTTCATAGTCTGTCCTTAACTGAAAAGAGCTGGACAAAGGA
GAGTGCTGCAGTCTATGCAAAGTCTCTGGAACAGCCTGGGGCTTTGGATGATCCTAATAGGGGC
AGTTTGGTAAAGAGAACTACAGTCCTGCCCCCAAAGCCTTCACAGGACAGAGAGGCCACAGATG
ATAAACCAGGGGTGAGCAGCCAGCTTCCCAAGGGGAAAGCTATAGAACTGGCACTGAAGAGACC
ACGGCCCCCCGTTCTGTCTCTTCATAGCTCATCAGAGACTCCATATCTCTTAAAAGAAACTAGC
AAAGGAGGCGGTCAGGGGGAGGATAGGAACTTGCTCTACTACTCTAAGCTAGGGCTGGTGGTCC
CATCTGGTGGTCCTGCTTCTGCAAACCAGAGCATTGACAGAAGTGGCCCACTAGTGAAAAGCCT
CCTCAGGCGGTCACTATCTATGGACAGCCAGGTTCCTGTTTACTCCCCCTCCTTAGATTTGAAG
TCATCCCAGGGATCATCCTCAGCGGCAAATGAGGCACCGGGCAGTGTGTTCTGTGCGATGTCTC
AAAAGTCATCCTTAAAAGATTGCAGTGAAAAAAAAGTCCTGGATGACAGGCCTCAAGTGCTCCA
GCCTCATCGCCTCAGGTCCTTTAGTGCTTCTCAGTCGACAGACAGGGAGGAGGCCTCCCCTGTG
ACTGAGGTACGCATTAAGACGGAGCCCAGCAGCCCACTTTCGGACCCCTCAGACATCATCCGGG
TCACTGTGGGAGGAGATGCAGCAGCAGCAGCCGCCACGAGAGAGCTGCCCCTCAAAACAGAGGA
AGACCAGAGAGATATGAGCAGACTCCCGGCAAAGAGAAGGTTCCAGACAGACAGAAGGTCACCC
TTGAAGAAGCCAAAGGCAAATGAACACGGGCCTGCTGTCTCAGAAGAGAACTGTGAAGAGGGCA
GGAGCCCTCCTTCCCTTGACAGCAACTTCCCAGATTCTGACTTAAACAGAGAGGAGTTTGGTGA
GTTGGAGGGGACGAGACCAAACAAAAAATTTAAATGCAAACATTGCCTTAAGATTTTTAGATCA
ACCGCGGGTCTTCACCGCCATGTTAACATGTACCATAACCCCGAGAAGCCTTACGCTTGTGACA
TCTGTCACAAGAGGTTTCATACCAACTTCAAAGTGTGGACACACTGTCAGACCCAACACGGCAT
AGTGAAGAACCCATCGCCAGCCTCTAGTTCCCATGCAGTTTTGGATGAGAAATTCCAAAGAAAG
CTGATTGACATAGTGAGAGAGAGGGAGATTAAGAAGGCCCTGATCATTAAGCTGAGGCGCAGCA
AGCCTGGCTTCCAGGGACAGAGTAGCTCCCCAGCACAGCAAGTCATCAAGAGGAACTTGCGCTC
CCGAGCCAAAGGGGCCTACATTTGTGCCTACTGTGGCAAGGCATACCGCTTTCTCTCTCAGTTT
AAGCAGCACATAAAGATGCACCCGGGAGAGAGGCCCCTCGGAGTAAGCAGAGCTGCTAAGCCAA
AAGCACGCGCGGTAGAGAGCAAGGAGGTTTACCCGTGCCGCCTCTGTAATGCTAAGCTCTCTTC
TCTTCTAGAGCAAGGCAACCACGAGCGCTTGTGCCGGAACGCCACCGTTTGCCCTTACTGCAGC
CTCAGGTTCTTCTCCCCCGCGCTGAAGCAGGAACATGAGGACAGGTGTGAGTACAAAAAGCTGA
CTTGCCTGGAGTGCATGCGCACCTTCAAGTCCTCCTTCAGCATCTGGCGGCACCAGGTGGAAGT
GCATAACCAGAACAACATGGCTTTAGCAGAGAACTTCTCCATGCCCACCCTGGACCACAACGGT
GAAGTGGCAGCTGCTTCCAGGCCTCAGACTGAGCCCAGCAAGGTAAACCATGTGGCCACTCCGA
AAGAGGATACGGCATTTAGCGACTCTTCAGAACAAGTGAACTTCGATTCTGAGGATTCCTCCTG
CCTCCCTGAAGACTTGAGTCTTTCAAAGCAACTGAAAGTCCAAGTCAAAGAGGAGCCTGTGGAG
GAGGCTGAGGAGGAGGCTCCTGAGGTTAGCGCAGCTCCCAGGGAGGCCGGCCCCAGCAAGGAGG
CCGGCCTATGGCCCTGTGAGAAATGCGGAAAGATGTTCACGGCACACAAGCAGCTGGAGCGGCA
CCAGGAGCTGCTGTGTTCCGTGAAGCCCTTCATCTGCCACGTATGCCACAAAGCCTTCCGTACC
AACTTCCGGCTCTGGAGTCACTTCCAGTCCCACATGTCTCAGGCTACAGAGGAGCCTGTGCAGA
AAGAGCCTGAGGTGTGTCCTGTGCCCACAAACTCCCCCTCACCACCACCTCTGCCACCTCCACC
ACCCTTGCCCAAGATTCAGCCCCTGGAGCCCGACAGCCCCACAGGCCTGCCTGAGAACCCAGCC
CCAGCTACAGAGAAGCTCTTTGCACCCCAGGAGTCAGATACCCTATTCTACCACGCCCCGCCCC
TTTCAGCAATCACATTTAAGAGACAGTTCATGTGCAAGCTCTGCCACAGGACATTCAAGACGGC
CTTCAGCCTTTGGAGTCATGAGCAGACACACAATTAAAGGGCCTCCCCTTCACCTGTCGCAAAG
CAGCAGGCCCTCAGCTTGTGAACTGTGTCCTAAGACAGAATATTTGATAAAAATAATAAAGGTT
GGAAATTTTTATGTTTGAATTTAAGTTTGGGATGAATTACTATTGGCTAGGAATGACCTCACAG
TTTTCTGGACCTCAGCAGCAGGGGTTGGATTCTATTACTCTTGAAGTTGGGTTAATGTTGGTGA
TTAAGGTTTTTGGTTTCTGGGTAGTGGGATGCTGGGAAGAGGTTTTTTTTGGTTTTGGTTTTGG
GTTTGTTTTTGTTTTCTGATTATTGCAGACACCTAAGTTTGAGGTAACCCTTAGCCATGTTTTT
AAGGCCAAAAACATACAAGGAAGAAGAGGAGTCATTTGCAGTATTGAGTCAGATTTTAGAATAC
TTTAGCAATAAGAAAAGCCAAGCCCCAACTTTAGTAAATTATCCTGACACTTGATAAGAAAAAT
AATTGGTATTTTGTGGTCCTAGGAAACTTTCTTTTTGTACGAAAATTGTGAGAATTTAAATCAG
CAATAGTCACACTTAGATTTTTTTATAAAAGAACGATCTGTCAATCACTCCATATNGCTAATCA
GTGATGGTCACGTGCTAAGGGAGGCAGAGTAATAGAAGCAAGTTTGTGGGGTGCTCTACAATCG
GCTGCAACAGGTTAGTTGTGAAAGCCGCTGAACTCTGGTATGTTCTCTCCATCATAGCATGGCT
TTCGACTGGCGCTTTAGAACTGACAATGTTCTCTGTCAGCTTGAAACTCAGGTGGCATTGAGAT
AAGCAGTGCTAGCATGAGGTTAGCAGAGCACAGCCTTACCATATCCTAGACCACCATTCACTCC
AGAGGCTTCAAAGATTGGAGGAAATGCCATGTTGCAGCTTCCATGTGTTTTCCAAGAACCGTAC
ACACAACATAACATTTTCTGCCTGCCTTTTGTGAGGACGTCTGTGGGGGTATTGGAATGGACAC
CAGTGAAATTATCACTACCCAATATGCAAATGTGTATTAAAGCACTAGCAAGGGTCCAAAATTA
GTTTTTACTACTTGACTTGGTACTTAGGGTTTGGGCTCCTCTTTTGTTTTTTCTTGTTCTGTTT
TTGTTTTGTTCTATGCAGGCTGTAATTAAATCTCTCCATAGGCAGAATCCAAAGTTCAGTGAAA
TATTTCAAAAGACAAAGGGAAGTTCACACCTGGGAAGGAAATTAGGGGACACAAACTCTCTGTT
CACTTTCGCTGCAAGCTGTTTCTTCCCATTTAAGGTGCATTCAACAGAGACACCGACTCATCTA
CTCACCAGCATTCCACACCCCTGGGAGCAAAGGCAATCTTTATATTGAAACTTTTTTTTTTTAT
AAAATACTAACTGACTTTGTATATTATAGAAGCTATATGTGGAATTTTGCCTTTTATCTTTTCA
CTTGAAAAAGCTATCAAAAGTCCCTAAGTATTCCTATTTTATTTCTTAAAATTCAGCGAAGAAG
GGAAATAAAATGAAGTTGCAGTTACTAATTCTTGCCATCTGCTTTCTTGAACTATGCATTTTAG
AGATAAACTAAAAGTGTCCACCATTTAATGAATGAAGCTAGTGCCGGGCTAAGTAGCTGTCCAC
TGAACTCATTTCCTGTGGTGAGTGAATGGTCTCTCCTCAGAGTGTTACTACTTCTTTAAGGCCA
TCTCCCTGCATGGTCATCTCCTGTGTAGCTACAGAGTGATAACCTCCAAACCTGGCATTGCCAG
CTCAGTGCCCCAAGACTTGAACCTATGCTACATTTTTGAAGATTTATAAAATAACATTCTTGGA
AAAAAAGAAAAAAAGTATTTTTGATCTAAATACAGGCTCTGCATATGTTAGGTTTTACAAATTA
CCAGTGTTTGTCACCTTTTTTTGTCTAGGAAGAAAACATAAGATTTCAAATAAAATTTTGAACC
AAAAACATTTATAATGCAGTTGTGGTTTTTCTATTGCTTTTTATACTGTATCTTAAAAGACATC
AGGCTGCAAGAATTTATTTTGATGTCAAACACTATCCTTCCATTCATGTAACTATTTTAAATGC
TAAGAAACAAAGTAATAAAAAACAGTAGTCACTTTATTCAGTAAACCGTTTTTTAGAGAATGTT
TATCTCAGCAGGCAGATGTTTAGTGCGAAATAACTAGTCTTTCACCATTGTAAATCTTTAGATA
GTAAAGATATTCTTGTAAATGTTTTTCTGATTGTATTAATTTTTGCAAGTATAGAGAGCTCATT
GTTTCTTGTAATTATTTAAGATGCCTGTTTTTTTATGCAGTTGTGGAAAGAATGTAAACTTTTA
ATATATTCTTTGTTAACATG

hide sequence

RefSeq Acc Id:

XM_006248169 ⟹ XP_006248231

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,399 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,040 (-)	NCBI
Rnor_6.0	11	38,442,716 - 38,457,410 (-)	NCBI
Rnor_5.0	11	41,952,579 - 41,967,272 (-)	NCBI

Sequence:

show sequence

AGCGCTGCCTGCGATGACCTCATCCCTGGTGTGGGATGACGTCAAATTCAAGATGGATGGAATC
ACAGCGGCAGCGGAGGCTGCGGGTTGCGCGAGCGGAGTGTGAGCGGAAAGGGGCTTGGCGCCTG
CCCCAGGGCTGAAGAGCGTCACAGGAATGTGAGGTGCAGGAGAACAGGAAGCCAGCCAACGAGC
TCACCTCCCATCATCAGCACCTCTTATGATGCACAGTGTACAGCGGGCTCACAAACACTCGGGA
GAGGAAGAGAGAAGAAAGATGTGTGCTTGCCAGATAAACTGCAGAATGGAGGGACTACTGCATT
ACATCAACCCAGCACATGCCATCTCTCTGCTCAGTGCCCTCAATGAGGAGCGCCTCAAGGGACA
GCTGTGTGACGTGCTCCTGATTGTTGGAGACCAGAAGTTCCGAGCTCATAAGAACGTCTTGGCT
GCCAGCAGTGAGTACTTCCAGAGTTTATTCACGAATAAGGAGAACGAGGCTCAGACTGTCTTTC
AGCTGGACTTCTGTGAGCCTGATGCTTTTGACAACGTTCTGAACTACATTTACTCTTCTTCCCT
CTTTGTGGAGAAGGGCAGCCTTGCTGCTGTGCAGGAGCTGGGGTATAGCCTTGGTATCTCCTTC
CTGACCAACATCGTTGCCAAAGCCCCTCAGGCTCCTTTTCCAGCCTGTCCCAACAGGAAAAGAG
TGCCAGTGGAAGATGATGAAACCACCTCTCAAAAGCGAAGTGTCATTGTATGTCAGGGCAGGAG
CGAAGTGCCAGGGAAAGCCAGTGGTCCAGCCATGCAGGACCTTAGCCATGCTGCCCGAGCCTCC
CCCAGTGGTTCAGTCAAGACCAGCACCAGTAAGCCACATGTGGCCAAGCCACCAGAGCAGCTTC
ATAGTCTGTCCTTAACTGAAAAGAGCTGGACAAAGGAGAGTGCTGCAGTCTATGCAAAGTCTCT
GGAACAGCCTGGGGCTTTGGATGATCCTAATAGGGGCAGTTTGGTAAAGAGAACTACAGTCCTG
CCCCCAAAGCCTTCACAGGACAGAGAGGCCACAGATGATAAACCAGGGGTGAGCAGCCAGCTTC
CCAAGGGGAAAGCTATAGAACTGGCACTGAAGAGACCACGGCCCCCCGTTCTGTCTCTTCATAG
CTCATCAGAGACTCCATATCTCTTAAAAGAAACTAGCAAAGGAGGCGGTCAGGGGGAGGATAGG
AACTTGCTCTACTACTCTAAGCTAGGGCTGGTGGTCCCATCTGGTGGTCCTGCTTCTGCAAACC
AGAGCATTGACAGAAGTGGCCCACTAGTGAAAAGCCTCCTCAGGCGGTCACTATCTATGGACAG
CCAGGTTCCTGTTTACTCCCCCTCCTTAGATTTGAAGTCATCCCAGGGATCATCCTCAGCGGCA
AATGAGGCACCGGGCAGTGTGTTCTGTGCGATGTCTCAAAAGTCATCCTTAAAAGATTGCAGTG
AAAAAAAAGTCCTGGATGACAGGCCTCAAGTGCTCCAGCCTCATCGCCTCAGGTCCTTTAGTGC
TTCTCAGTCGACAGACAGGGAGGAGGCCTCCCCTGTGACTGAGGTACGCATTAAGACGGAGCCC
AGCAGCCCACTTTCGGACCCCTCAGACATCATCCGGGTCACTGTGGGAGGAGATGCAGCAGCAG
CAGCCGCCACGAGAGAGCTGCCCCTCAAAACAGAGGAAGACCAGAGAGATATGAGCAGACTCCC
GGCAAAGAGAAGGTTCCAGACAGACAGAAGGTCACCCTTGAAGAAGCCAAAGGCAAATGAACAC
GGGCCTGCTGTCTCAGAAGAGAACTGTGAAGAGGGCAGGAGCCCTCCTTCCCTTGACAGCAACT
TCCCAGATTCTGACTTAAACAGAGAGGAGTTTGGTGAGTTGGAGGGGACGAGACCAAACAAAAA
ATTTAAATGCAAACATTGCCTTAAGATTTTTAGATCAACCGCGGGTCTTCACCGCCATGTTAAC
ATGTACCATAACCCCGAGAAGCCTTACGCTTGTGACATCTGTCACAAGAGGTTTCATACCAACT
TCAAAGTGTGGACACACTGTCAGACCCAACACGGCATAGTGAAGAACCCATCGCCAGCCTCTAG
TTCCCATGCAGTTTTGGATGAGAAATTCCAAAGAAAGCTGATTGACATAGTGAGAGAGAGGGAG
ATTAAGAAGGCCCTGATCATTAAGCTGAGGCGCAGCAAGCCTGGCTTCCAGGGACAGAGTAGCT
CCCCAGCACAGCAAGTCATCAAGAGGAACTTGCGCTCCCGAGCCAAAGGGGCCTACATTTGTGC
CTACTGTGGCAAGGCATACCGCTTTCTCTCTCAGTTTAAGCAGCACATAAAGATGCACCCGGGA
GAGAGGCCCCTCGGAGTAAGCAGAGCTGCTAAGCCAAAAGCACGCGCGGTAGAGAGCAAGGAGG
TTTACCCGTGCCGCCTCTGTAATGCTAAGCTCTCTTCTCTTCTAGAGCAAGGCAACCACGAGCG
CTTGTGCCGGAACGCCACCGTTTGCCCTTACTGCAGCCTCAGGTTCTTCTCCCCCGCGCTGAAG
CAGGAACATGAGGACAGGTGTGAGTACAAAAAGCTGACTTGCCTGGAGTGCATGCGCACCTTCA
AGTCCTCCTTCAGCATCTGGCGGCACCAGGTGGAAGTGCATAACCAGAACAACATGGCTTTAGC
AGAGAACTTCTCCATGCCCACCCTGGACCACAACGGTGAAGTGGCAGCTGCTTCCAGGCCTCAG
ACTGAGCCCAGCAAGGTAAACCATGTGGCCACTCCGAAAGAGGATACGGCATTTAGCGACTCTT
CAGAACAAGTGAACTTCGATTCTGAGGATTCCTCCTGCCTCCCTGAAGACTTGAGTCTTTCAAA
GCAACTGAAAGTCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCTGAGGAGGAGGCTCCTGAGGTT
AGCGCAGCTCCCAGGGAGGCCGGCCCCAGCAAGGAGGCCGGCCTATGGCCCTGTGAGAAATGCG
GAAAGATGTTCACGGCACACAAGCAGCTGGAGCGGCACCAGGAGCTGCTGTGTTCCGTGAAGCC
CTTCATCTGCCACGTATGCCACAAAGCCTTCCGTACCAACTTCCGGCTCTGGAGTCACTTCCAG
TCCCACATGTCTCAGGCTACAGAGGAGCCTGTGCAGAAAGAGCCTGAGGTGTGTCCTGTGCCCA
CAAACTCCCCCTCACCACCACCTCTGCCACCTCCACCACCCTTGCCCAAGATTCAGCCCCTGGA
GCCCGACAGCCCCACAGGCCTGCCTGAGAACCCAGCCCCAGCTACAGAGAAGCTCTTTGCACCC
CAGGAGTCAGATACCCTATTCTACCACGCCCCGCCCCTTTCAGCAATCACATTTAAGAGACAGT
TCATGTGCAAGCTCTGCCACAGGACATTCAAGACGGCCTTCAGCCTTTGGAGTCATGAGCAGAC
ACACAATTAAAGGGCCTCCCCTTCACCTGTCGCAAAGCAGCAGGCCCTCAGCTTGTGAACTGTG
TCCTAAGACAGAATATTTGATAAAAATAATAAAGGTTGGAAATTTTTATGTTTGAATTTAAGTT
TGGGATGAATTACTATTGGCTAGGAATGACCTCACAGTTTTCTGGACCTCAGCAGCAGGGGTTG
GATTCTATTACTCTTGAAGTTGGGTTAATGTTGGTGATTAAGGTTTTTGGTTTCTGGGTAGTGG
GATGCTGGGAAGAGGTTTTTTTTGGTTTTGGTTTTGGGTTTGTTTTTGTTTTCTGATTATTGCA
GACACCTAAGTTTGAGGTAACCCTTAGCCATGTTTTTAAGGCCAAAAACATACAAGGAAGAAGA
GGAGTCATTTGCAGTATTGAGTCAGATTTTAGAATACTTTAGCAATAAGAAAAGCCAAGCCCCA
ACTTTAGTAAATTATCCTGACACTTGATAAGAAAAATAATTGGTATTTTGTGGTCCTAGGAAAC
TTTCTTTTTGTACGAAAATTGTGAGAATTTAAATCAGCAATAGTCACACTTAGATTTTTTTATA
AAAGAACGATCTGTCAATCACTCCATATNGCTAATCAGTGATGGTCACGTGCTAAGGGAGGCAG
AGTAATAGAAGCAAGTTTGTGGGGTGCTCTACAATCGGCTGCAACAGGTTAGTTGTGAAAGCCG
CTGAACTCTGGTATGTTCTCTCCATCATAGCATGGCTTTCGACTGGCGCTTTAGAACTGACAAT
GTTCTCTGTCAGCTTGAAACTCAGGTGGCATTGAGATAAGCAGTGCTAGCATGAGGTTAGCAGA
GCACAGCCTTACCATATCCTAGACCACCATTCACTCCAGAGGCTTCAAAGATTGGAGGAAATGC
CATGTTGCAGCTTCCATGTGTTTTCCAAGAACCGTACACACAACATAACATTTTCTGCCTGCCT
TTTGTGAGGACGTCTGTGGGGGTATTGGAATGGACACCAGTGAAATTATCACTACCCAATATGC
AAATGTGTATTAAAGCACTAGCAAGGGTCCAAAATTAGTTTTTACTACTTGACTTGGTACTTAG
GGTTTGGGCTCCTCTTTTGTTTTTTCTTGTTCTGTTTTTGTTTTGTTCTATGCAGGCTGTAATT
AAATCTCTCCATAGGCAGAATCCAAAGTTCAGTGAAATATTTCAAAAGACAAAGGGAAGTTCAC
ACCTGGGAAGGAAATTAGGGGACACAAACTCTCTGTTCACTTTCGCTGCAAGCTGTTTCTTCCC
ATTTAAGGTGCATTCAACAGAGACACCGACTCATCTACTCACCAGCATTCCACACCCCTGGGAG
CAAAGGCAATCTTTATATTGAAACTTTTTTTTTTTATAAAATACTAACTGACTTTGTATATTAT
AGAAGCTATATGTGGAATTTTGCCTTTTATCTTTTCACTTGAAAAAGCTATCAAAAGTCCCTAA
GTATTCCTATTTTATTTCTTAAAATTCAGCGAAGAAGGGAAATAAAATGAAGTTGCAGTTACTA
ATTCTTGCCATCTGCTTTCTTGAACTATGCATTTTAGAGATAAACTAAAAGTGTCCACCATTTA
ATGAATGAAGCTAGTGCCGGGCTAAGTAGCTGTCCACTGAACTCATTTCCTGTGGTGAGTGAAT
GGTCTCTCCTCAGAGTGTTACTACTTCTTTAAGGCCATCTCCCTGCATGGTCATCTCCTGTGTA
GCTACAGAGTGATAACCTCCAAACCTGGCATTGCCAGCTCAGTGCCCCAAGACTTGAACCTATG
CTACATTTTTGAAGATTTATAAAATAACATTCTTGGAAAAAAAGAAAAAAAGTATTTTTGATCT
AAATACAGGCTCTGCATATGTTAGGTTTTACAAATTACCAGTGTTTGTCACCTTTTTTTGTCTA
GGAAGAAAACATAAGATTTCAAATAAAATTTTGAACCAAAAACATTTATAATGCAGTTGTGGTT
TTTCTATTGCTTTTTATACTGTATCTTAAAAGACATCAGGCTGCAAGAATTTATTTTGATGTCA
AACACTATCCTTCCATTCATGTAACTATTTTAAATGCTAAGAAACAAAGTAATAAAAAACAGTA
GTCACTTTATTCAGTAAACCGTTTTTTAGAGAATGTTTATCTCAGCAGGCAGATGTTTAGTGCG
AAATAACTAGTCTTTCACCATTGTAAATCTTTAGATAGTAAAGATATTCTTGTAAATGTTTTTC
TGATTGTATTAATTTTTGCAAGTATAGAGAGCTCATTGTTTCTTGTAATTATTTAAGATGCCTG
TTTTTTTATGCAGTTGTGGAAAGAATGTAAACTTTTAATATATTCTTTGTTAACATG

hide sequence

RefSeq Acc Id:

XM_006248172 ⟹ XP_006248234

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,375 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,034 (-)	NCBI
Rnor_6.0	11	38,442,716 - 38,457,411 (-)	NCBI
Rnor_5.0	11	41,952,579 - 41,967,272 (-)	NCBI

Sequence:

show sequence

GAGCGCTGCCTGCGATGACCTCATCCCTGGTGTGGGATGACGTCAAATTCAAGATGGATGGAAT
CACAGCGGCAGCGGAGGCTGCGGGTTGCGCGAGCGGAGTGTGAGCGGAAAGGGGCTTGGCGCCT
GCCCCAGGGCTGAAGAGCGGTGAGTAACCGTCACGCTCCGCGCCCTAGGAGGACGTCGGGCCCT
GTCCGGGCTACGGCCTCTCTGCAAAACGCGGCCTTTCCTGACGTAACTCTGAGATAAACTGCAG
AATGGAGGGACTACTGCATTACATCAACCCAGCACATGCCATCTCTCTGCTCAGTGCCCTCAAT
GAGGAGCGCCTCAAGGGACAGCTGTGTGACGTGCTCCTGATTGTTGGAGACCAGAAGTTCCGAG
CTCATAAGAACGTCTTGGCTGCCAGCAGTGAGTACTTCCAGAGTTTATTCACGAATAAGGAGAA
CGAGGCTCAGACTGTCTTTCAGCTGGACTTCTGTGAGCCTGATGCTTTTGACAACGTTCTGAAC
TACATTTACTCTTCTTCCCTCTTTGTGGAGAAGGGCAGCCTTGCTGCTGTGCAGGAGCTGGGGT
ATAGCCTTGGTATCTCCTTCCTGACCAACATCGTTGCCAAAGCCCCTCAGGCTCCTTTTCCAGC
CTGTCCCAACAGGAAAAGAGTGCCAGTGGAAGATGATGAAACCACCTCTCAAAAGCGAAGTGTC
ATTGTATGTCAGGGCAGGAGCGAAGTGCCAGGGAAAGCCAGTGGTCCAGCCATGCAGGACCTTA
GCCATGCTGCCCGAGCCTCCCCCAGTGGTTCAGTCAAGACCAGCACCAGTAAGCCACATGTGGC
CAAGCCACCAGAGCAGCTTCATAGTCTGTCCTTAACTGAAAAGAGCTGGACAAAGGAGAGTGCT
GCAGTCTATGCAAAGTCTCTGGAACAGCCTGGGGCTTTGGATGATCCTAATAGGGGCAGTTTGG
TAAAGAGAACTACAGTCCTGCCCCCAAAGCCTTCACAGGACAGAGAGGCCACAGATGATAAACC
AGGGGTGAGCAGCCAGCTTCCCAAGGGGAAAGCTATAGAACTGGCACTGAAGAGACCACGGCCC
CCCGTTCTGTCTCTTCATAGCTCATCAGAGACTCCATATCTCTTAAAAGAAACTAGCAAAGGAG
GCGGTCAGGGGGAGGATAGGAACTTGCTCTACTACTCTAAGCTAGGGCTGGTGGTCCCATCTGG
TGGTCCTGCTTCTGCAAACCAGAGCATTGACAGAAGTGGCCCACTAGTGAAAAGCCTCCTCAGG
CGGTCACTATCTATGGACAGCCAGGTTCCTGTTTACTCCCCCTCCTTAGATTTGAAGTCATCCC
AGGGATCATCCTCAGCGGCAAATGAGGCACCGGGCAGTGTGTTCTGTGCGATGTCTCAAAAGTC
ATCCTTAAAAGATTGCAGTGAAAAAAAAGTCCTGGATGACAGGCCTCAAGTGCTCCAGCCTCAT
CGCCTCAGGTCCTTTAGTGCTTCTCAGTCGACAGACAGGGAGGAGGCCTCCCCTGTGACTGAGG
TACGCATTAAGACGGAGCCCAGCAGCCCACTTTCGGACCCCTCAGACATCATCCGGGTCACTGT
GGGAGGAGATGCAGCAGCAGCAGCCGCCACGAGAGAGCTGCCCCTCAAAACAGAGGAAGACCAG
AGAGATATGAGCAGACTCCCGGCAAAGAGAAGGTTCCAGACAGACAGAAGGTCACCCTTGAAGA
AGCCAAAGGCAAATGAACACGGGCCTGCTGTCTCAGAAGAGAACTGTGAAGAGGGCAGGAGCCC
TCCTTCCCTTGACAGCAACTTCCCAGATTCTGACTTAAACAGAGAGGAGTTTGGTGAGTTGGAG
GGGACGAGACCAAACAAAAAATTTAAATGCAAACATTGCCTTAAGATTTTTAGATCAACCGCGG
GTCTTCACCGCCATGTTAACATGTACCATAACCCCGAGAAGCCTTACGCTTGTGACATCTGTCA
CAAGAGGTTTCATACCAACTTCAAAGTGTGGACACACTGTCAGACCCAACACGGCATAGTGAAG
AACCCATCGCCAGCCTCTAGTTCCCATGCAGTTTTGGATGAGAAATTCCAAAGAAAGCTGATTG
ACATAGTGAGAGAGAGGGAGATTAAGAAGGCCCTGATCATTAAGCTGAGGCGCAGCAAGCCTGG
CTTCCAGGGACAGAGTAGCTCCCCAGCACAGCAAGTCATCAAGAGGAACTTGCGCTCCCGAGCC
AAAGGGGCCTACATTTGTGCCTACTGTGGCAAGGCATACCGCTTTCTCTCTCAGTTTAAGCAGC
ACATAAAGATGCACCCGGGAGAGAGGCCCCTCGGAGTAAGCAGAGCTGCTAAGCCAAAAGCACG
CGCGGTAGAGAGCAAGGAGGTTTACCCGTGCCGCCTCTGTAATGCTAAGCTCTCTTCTCTTCTA
GAGCAAGGCAACCACGAGCGCTTGTGCCGGAACGCCACCGTTTGCCCTTACTGCAGCCTCAGGT
TCTTCTCCCCCGCGCTGAAGCAGGAACATGAGGACAGGTGTGAGTACAAAAAGCTGACTTGCCT
GGAGTGCATGCGCACCTTCAAGTCCTCCTTCAGCATCTGGCGGCACCAGGTGGAAGTGCATAAC
CAGAACAACATGGCTTTAGCAGAGAACTTCTCCATGCCCACCCTGGACCACAACGGTGAAGTGG
CAGCTGCTTCCAGGCCTCAGACTGAGCCCAGCAAGGTAAACCATGTGGCCACTCCGAAAGAGGA
TACGGCATTTAGCGACTCTTCAGAACAAGTGAACTTCGATTCTGAGGATTCCTCCTGCCTCCCT
GAAGACTTGAGTCTTTCAAAGCAACTGAAAGTCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCTG
AGGAGGAGGCTCCTGAGGTTAGCGCAGCTCCCAGGGAGGCCGGCCCCAGCAAGGAGGCCGGCCT
ATGGCCCTGTGAGAAATGCGGAAAGATGTTCACGGCACACAAGCAGCTGGAGCGGCACCAGGAG
CTGCTGTGTTCCGTGAAGCCCTTCATCTGCCACGTATGCCACAAAGCCTTCCGTACCAACTTCC
GGCTCTGGAGTCACTTCCAGTCCCACATGTCTCAGGCTACAGAGGAGCCTGTGCAGAAAGAGCC
TGAGGTGTGTCCTGTGCCCACAAACTCCCCCTCACCACCACCTCTGCCACCTCCACCACCCTTG
CCCAAGATTCAGCCCCTGGAGCCCGACAGCCCCACAGGCCTGCCTGAGAACCCAGCCCCAGCTA
CAGAGAAGCTCTTTGCACCCCAGGAGTCAGATACCCTATTCTACCACGCCCCGCCCCTTTCAGC
AATCACATTTAAGAGACAGTTCATGTGCAAGCTCTGCCACAGGACATTCAAGACGGCCTTCAGC
CTTTGGAGTCATGAGCAGACACACAATTAAAGGGCCTCCCCTTCACCTGTCGCAAAGCAGCAGG
CCCTCAGCTTGTGAACTGTGTCCTAAGACAGAATATTTGATAAAAATAATAAAGGTTGGAAATT
TTTATGTTTGAATTTAAGTTTGGGATGAATTACTATTGGCTAGGAATGACCTCACAGTTTTCTG
GACCTCAGCAGCAGGGGTTGGATTCTATTACTCTTGAAGTTGGGTTAATGTTGGTGATTAAGGT
TTTTGGTTTCTGGGTAGTGGGATGCTGGGAAGAGGTTTTTTTTGGTTTTGGTTTTGGGTTTGTT
TTTGTTTTCTGATTATTGCAGACACCTAAGTTTGAGGTAACCCTTAGCCATGTTTTTAAGGCCA
AAAACATACAAGGAAGAAGAGGAGTCATTTGCAGTATTGAGTCAGATTTTAGAATACTTTAGCA
ATAAGAAAAGCCAAGCCCCAACTTTAGTAAATTATCCTGACACTTGATAAGAAAAATAATTGGT
ATTTTGTGGTCCTAGGAAACTTTCTTTTTGTACGAAAATTGTGAGAATTTAAATCAGCAATAGT
CACACTTAGATTTTTTTATAAAAGAACGATCTGTCAATCACTCCATATNGCTAATCAGTGATGG
TCACGTGCTAAGGGAGGCAGAGTAATAGAAGCAAGTTTGTGGGGTGCTCTACAATCGGCTGCAA
CAGGTTAGTTGTGAAAGCCGCTGAACTCTGGTATGTTCTCTCCATCATAGCATGGCTTTCGACT
GGCGCTTTAGAACTGACAATGTTCTCTGTCAGCTTGAAACTCAGGTGGCATTGAGATAAGCAGT
GCTAGCATGAGGTTAGCAGAGCACAGCCTTACCATATCCTAGACCACCATTCACTCCAGAGGCT
TCAAAGATTGGAGGAAATGCCATGTTGCAGCTTCCATGTGTTTTCCAAGAACCGTACACACAAC
ATAACATTTTCTGCCTGCCTTTTGTGAGGACGTCTGTGGGGGTATTGGAATGGACACCAGTGAA
ATTATCACTACCCAATATGCAAATGTGTATTAAAGCACTAGCAAGGGTCCAAAATTAGTTTTTA
CTACTTGACTTGGTACTTAGGGTTTGGGCTCCTCTTTTGTTTTTTCTTGTTCTGTTTTTGTTTT
GTTCTATGCAGGCTGTAATTAAATCTCTCCATAGGCAGAATCCAAAGTTCAGTGAAATATTTCA
AAAGACAAAGGGAAGTTCACACCTGGGAAGGAAATTAGGGGACACAAACTCTCTGTTCACTTTC
GCTGCAAGCTGTTTCTTCCCATTTAAGGTGCATTCAACAGAGACACCGACTCATCTACTCACCA
GCATTCCACACCCCTGGGAGCAAAGGCAATCTTTATATTGAAACTTTTTTTTTTTATAAAATAC
TAACTGACTTTGTATATTATAGAAGCTATATGTGGAATTTTGCCTTTTATCTTTTCACTTGAAA
AAGCTATCAAAAGTCCCTAAGTATTCCTATTTTATTTCTTAAAATTCAGCGAAGAAGGGAAATA
AAATGAAGTTGCAGTTACTAATTCTTGCCATCTGCTTTCTTGAACTATGCATTTTAGAGATAAA
CTAAAAGTGTCCACCATTTAATGAATGAAGCTAGTGCCGGGCTAAGTAGCTGTCCACTGAACTC
ATTTCCTGTGGTGAGTGAATGGTCTCTCCTCAGAGTGTTACTACTTCTTTAAGGCCATCTCCCT
GCATGGTCATCTCCTGTGTAGCTACAGAGTGATAACCTCCAAACCTGGCATTGCCAGCTCAGTG
CCCCAAGACTTGAACCTATGCTACATTTTTGAAGATTTATAAAATAACATTCTTGGAAAAAAAG
AAAAAAAGTATTTTTGATCTAAATACAGGCTCTGCATATGTTAGGTTTTACAAATTACCAGTGT
TTGTCACCTTTTTTTGTCTAGGAAGAAAACATAAGATTTCAAATAAAATTTTGAACCAAAAACA
TTTATAATGCAGTTGTGGTTTTTCTATTGCTTTTTATACTGTATCTTAAAAGACATCAGGCTGC
AAGAATTTATTTTGATGTCAAACACTATCCTTCCATTCATGTAACTATTTTAAATGCTAAGAAA
CAAAGTAATAAAAAACAGTAGTCACTTTATTCAGTAAACCGTTTTTTAGAGAATGTTTATCTCA
GCAGGCAGATGTTTAGTGCGAAATAACTAGTCTTTCACCATTGTAAATCTTTAGATAGTAAAGA
TATTCTTGTAAATGTTTTTCTGATTGTATTAATTTTTGCAAGTATAGAGAGCTCATTGTTTCTT
GTAATTATTTAAGATGCCTGTTTTTTTATGCAGTTGTGGAAAGAATGTAAACTTTTAATATATT
CTTTGTTAACATG

hide sequence

RefSeq Acc Id:

XM_006248174 ⟹ XP_006248236

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,377 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,037 (-)	NCBI
Rnor_6.0	11	38,442,716 - 38,457,410 (-)	NCBI
Rnor_5.0	11	41,952,579 - 41,967,272 (-)	NCBI

Sequence:

show sequence

AGCGCTGCCTGCGATGACCTCATCCCTGGTGTGGGATGACGTCAAATTCAAGATGGATGGAATC
ACAGCGGCAGCGGAGGCTGCGGGTTGCGCGAGCGGAGTGTGAGCGGAAAGGGGCTTGGCGCCTG
CCCCAGGGCTGAAGAGCGATAAACTGCAGAATGGAGGGACTACTGCATTACATCAACCCAGCAC
ATGCCATCTCTCTGCTCAGTGCCCTCAATGAGGAGCGCCTCAAGGGACAGCTGTGTGACGTGCT
CCTGATTGTTGGAGACCAGAAGTTCCGAGCTCATAAGAACGTCTTGGCTGCCAGCAGTGAGTAC
TTCCAGAGTTTATTCACGAATAAGGAGAACGAGGCTCAGACTGTCTTTCAGCTGGACTTCTGTG
AGCCTGATGCTTTTGACAACGTTCTGAACTACATTTACTCTTCTTCCCTCTTTGTGGAGAAGGG
CAGCCTTGCTGCTGTGCAGGAGCTGGGGTATAGCCTTGGTATCTCCTTCCTGACCAACATCGTT
GCCAAAGCCCCTCAGGCTCCTTTTCCAGCCTGTCCCAACAGGAAAAGAGTGCCAGTGGAAGATG
ATGAAACCACCTCTCAAAAGCGAAGTGTCATTGTATGTCAGGGCAGGAGCGAAGTGCCAGGGAA
AGCCAGTGGTCCAGCCATGCAGGACCTTAGCCATGCTGCCCGAGCCTCCCCCAGTGGTTCAGTC
AAGACCAGCACCAGTAAGCCACATGTGGCCAAGCCACCAGAGCAGCTTCATAGTCTGTCCTTAA
CTGAAAAGAGCTGGACAAAGGAGAGTGCTGCAGTCTATGCAAAGTCTCTGGAACAGCCTGGGGC
TTTGGATGATCCTAATAGGGGCAGTTTGGTAAAGAGAACTACAGTCCTGCCCCCAAAGCCTTCA
CAGGACAGAGAGGCCACAGATGATAAACCAGGGGTGAGCAGCCAGCTTCCCAAGGGGAAAGCTA
TAGAACTGGCACTGAAGAGACCACGGCCCCCCGTTCTGTCTCTTCATAGCTCATCAGAGACTCC
ATATCTCTTAAAAGAAACTAGCAAAGGAGGCGGTCAGGGGGAGGATAGGAACTTGCTCTACTAC
TCTAAGCTAGGGCTGGTGGTCCCATCTGGTGGTCCTGCTTCTGCAAACCAGAGCATTGACAGAA
GTGGCCCACTAGTGAAAAGCCTCCTCAGGCGGTCACTATCTATGGACAGCCAGGTTCCTGTTTA
CTCCCCCTCCTTAGATTTGAAGTCATCCCAGGGATCATCCTCAGCGGCAAATGAGGCACCGGGC
AGTGTGTTCTGTGCGATGTCTCAAAAGTCATCCTTAAAAGATTGCAGTGAAAAAAAAGTCCTGG
ATGACAGGCCTCAAGTGCTCCAGCCTCATCGCCTCAGGTCCTTTAGTGCTTCTCAGTCGACAGA
CAGGGAGGAGGCCTCCCCTGTGACTGAGGTACGCATTAAGACGGAGCCCAGCAGCCCACTTTCG
GACCCCTCAGACATCATCCGGGTCACTGTGGGAGGAGATGCAGCAGCAGCAGCCGCCACGAGAG
AGCTGCCCCTCAAAACAGAGGAAGACCAGAGAGATATGAGCAGACTCCCGGCAAAGAGAAGGTT
CCAGACAGACAGAAGGTCACCCTTGAAGAAGCCAAAGGCAAATGAACACGGGCCTGCTGTCTCA
GAAGAGAACTGTGAAGAGGGCAGGAGCCCTCCTTCCCTTGACAGCAACTTCCCAGATTCTGACT
TAAACAGAGAGGAGTTTGGTGAGTTGGAGGGGACGAGACCAAACAAAAAATTTAAATGCAAACA
TTGCCTTAAGATTTTTAGATCAACCGCGGGTCTTCACCGCCATGTTAACATGTACCATAACCCC
GAGAAGCCTTACGCTTGTGACATCTGTCACAAGAGGTTTCATACCAACTTCAAAGTGTGGACAC
ACTGTCAGACCCAACACGGCATAGTGAAGAACCCATCGCCAGCCTCTAGTTCCCATGCAGTTTT
GGATGAGAAATTCCAAAGAAAGCTGATTGACATAGTGAGAGAGAGGGAGATTAAGAAGGCCCTG
ATCATTAAGCTGAGGCGCAGCAAGCCTGGCTTCCAGGGACAGAGTAGCTCCCCAGCACAGCAAG
TCATCAAGAGGAACTTGCGCTCCCGAGCCAAAGGGGCCTACATTTGTGCCTACTGTGGCAAGGC
ATACCGCTTTCTCTCTCAGTTTAAGCAGCACATAAAGATGCACCCGGGAGAGAGGCCCCTCGGA
GTAAGCAGAGCTGCTAAGCCAAAAGCACGCGCGGTAGAGAGCAAGGAGGTTTACCCGTGCCGCC
TCTGTAATGCTAAGCTCTCTTCTCTTCTAGAGCAAGGCAACCACGAGCGCTTGTGCCGGAACGC
CACCGTTTGCCCTTACTGCAGCCTCAGGTTCTTCTCCCCCGCGCTGAAGCAGGAACATGAGGAC
AGGTGTGAGTACAAAAAGCTGACTTGCCTGGAGTGCATGCGCACCTTCAAGTCCTCCTTCAGCA
TCTGGCGGCACCAGGTGGAAGTGCATAACCAGAACAACATGGCTTTAGCAGAGAACTTCTCCAT
GCCCACCCTGGACCACAACGGTGAAGTGGCAGCTGCTTCCAGGCCTCAGACTGAGCCCAGCAAG
GTAAACCATGTGGCCACTCCGAAAGAGGATACGGCATTTAGCGACTCTTCAGAACAAGTGAACT
TCGATTCTGAGGATTCCTCCTGCCTCCCTGAAGACTTGAGTCTTTCAAAGCAACTGAAAGTCCA
AGTCAAAGAGGAGCCTGTGGAGGAGGCTGAGGAGGAGGCTCCTGAGGTTAGCGCAGCTCCCAGG
GAGGCCGGCCCCAGCAAGGAGGCCGGCCTATGGCCCTGTGAGAAATGCGGAAAGATGTTCACGG
CACACAAGCAGCTGGAGCGGCACCAGGAGCTGCTGTGTTCCGTGAAGCCCTTCATCTGCCACGT
ATGCCACAAAGCCTTCCGTACCAACTTCCGGCTCTGGAGTCACTTCCAGTCCCACATGTCTCAG
GCTACAGAGGAGCCTGTGCAGAAAGAGCCTGAGGTGTGTCCTGTGCCCACAAACTCCCCCTCAC
CACCACCTCTGCCACCTCCACCACCCTTGCCCAAGATTCAGCCCCTGGAGCCCGACAGCCCCAC
AGGCCTGCCTGAGAACCCAGCCCCAGCTACAGAGAAGCTCTTTGCACCCCAGGAGTCAGATACC
CTATTCTACCACGCCCCGCCCCTTTCAGCAATCACATTTAAGAGACAGTTCATGTGCAAGCTCT
GCCACAGGACATTCAAGACGGCCTTCAGCCTTTGGAGTCATGAGCAGACACACAATTAAAGGGC
CTCCCCTTCACCTGTCGCAAAGCAGCAGGCCCTCAGCTTGTGAACTGTGTCCTAAGACAGAATA
TTTGATAAAAATAATAAAGGTTGGAAATTTTTATGTTTGAATTTAAGTTTGGGATGAATTACTA
TTGGCTAGGAATGACCTCACAGTTTTCTGGACCTCAGCAGCAGGGGTTGGATTCTATTACTCTT
GAAGTTGGGTTAATGTTGGTGATTAAGGTTTTTGGTTTCTGGGTAGTGGGATGCTGGGAAGAGG
TTTTTTTTGGTTTTGGTTTTGGGTTTGTTTTTGTTTTCTGATTATTGCAGACACCTAAGTTTGA
GGTAACCCTTAGCCATGTTTTTAAGGCCAAAAACATACAAGGAAGAAGAGGAGTCATTTGCAGT
ATTGAGTCAGATTTTAGAATACTTTAGCAATAAGAAAAGCCAAGCCCCAACTTTAGTAAATTAT
CCTGACACTTGATAAGAAAAATAATTGGTATTTTGTGGTCCTAGGAAACTTTCTTTTTGTACGA
AAATTGTGAGAATTTAAATCAGCAATAGTCACACTTAGATTTTTTTATAAAAGAACGATCTGTC
AATCACTCCATATNGCTAATCAGTGATGGTCACGTGCTAAGGGAGGCAGAGTAATAGAAGCAAG
TTTGTGGGGTGCTCTACAATCGGCTGCAACAGGTTAGTTGTGAAAGCCGCTGAACTCTGGTATG
TTCTCTCCATCATAGCATGGCTTTCGACTGGCGCTTTAGAACTGACAATGTTCTCTGTCAGCTT
GAAACTCAGGTGGCATTGAGATAAGCAGTGCTAGCATGAGGTTAGCAGAGCACAGCCTTACCAT
ATCCTAGACCACCATTCACTCCAGAGGCTTCAAAGATTGGAGGAAATGCCATGTTGCAGCTTCC
ATGTGTTTTCCAAGAACCGTACACACAACATAACATTTTCTGCCTGCCTTTTGTGAGGACGTCT
GTGGGGGTATTGGAATGGACACCAGTGAAATTATCACTACCCAATATGCAAATGTGTATTAAAG
CACTAGCAAGGGTCCAAAATTAGTTTTTACTACTTGACTTGGTACTTAGGGTTTGGGCTCCTCT
TTTGTTTTTTCTTGTTCTGTTTTTGTTTTGTTCTATGCAGGCTGTAATTAAATCTCTCCATAGG
CAGAATCCAAAGTTCAGTGAAATATTTCAAAAGACAAAGGGAAGTTCACACCTGGGAAGGAAAT
TAGGGGACACAAACTCTCTGTTCACTTTCGCTGCAAGCTGTTTCTTCCCATTTAAGGTGCATTC
AACAGAGACACCGACTCATCTACTCACCAGCATTCCACACCCCTGGGAGCAAAGGCAATCTTTA
TATTGAAACTTTTTTTTTTTATAAAATACTAACTGACTTTGTATATTATAGAAGCTATATGTGG
AATTTTGCCTTTTATCTTTTCACTTGAAAAAGCTATCAAAAGTCCCTAAGTATTCCTATTTTAT
TTCTTAAAATTCAGCGAAGAAGGGAAATAAAATGAAGTTGCAGTTACTAATTCTTGCCATCTGC
TTTCTTGAACTATGCATTTTAGAGATAAACTAAAAGTGTCCACCATTTAATGAATGAAGCTAGT
GCCGGGCTAAGTAGCTGTCCACTGAACTCATTTCCTGTGGTGAGTGAATGGTCTCTCCTCAGAG
TGTTACTACTTCTTTAAGGCCATCTCCCTGCATGGTCATCTCCTGTGTAGCTACAGAGTGATAA
CCTCCAAACCTGGCATTGCCAGCTCAGTGCCCCAAGACTTGAACCTATGCTACATTTTTGAAGA
TTTATAAAATAACATTCTTGGAAAAAAAGAAAAAAAGTATTTTTGATCTAAATACAGGCTCTGC
ATATGTTAGGTTTTACAAATTACCAGTGTTTGTCACCTTTTTTTGTCTAGGAAGAAAACATAAG
ATTTCAAATAAAATTTTGAACCAAAAACATTTATAATGCAGTTGTGGTTTTTCTATTGCTTTTT
ATACTGTATCTTAAAAGACATCAGGCTGCAAGAATTTATTTTGATGTCAAACACTATCCTTCCA
TTCATGTAACTATTTTAAATGCTAAGAAACAAAGTAATAAAAAACAGTAGTCACTTTATTCAGT
AAACCGTTTTTTAGAGAATGTTTATCTCAGCAGGCAGATGTTTAGTGCGAAATAACTAGTCTTT
CACCATTGTAAATCTTTAGATAGTAAAGATATTCTTGTAAATGTTTTTCTGATTGTATTAATTT
TTGCAAGTATAGAGAGCTCATTGTTTCTTGTAATTATTTAAGATGCCTGTTTTTTTATGCAGTT
GTGGAAAGAATGTAAACTTTTAATATATTCTTTGTTAACATG

hide sequence

RefSeq Acc Id:

XM_039088400 ⟹ XP_038944328

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,375 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,033 (-)	NCBI

RefSeq Acc Id:

XM_039088401 ⟹ XP_038944329

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,375 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,033 (-)	NCBI

RefSeq Acc Id:

XM_039088403 ⟹ XP_038944331

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,344 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,030 (-)	NCBI

RefSeq Acc Id:

XM_039088404 ⟹ XP_038944332

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,375 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,034 (-)	NCBI

RefSeq Acc Id:

XM_039088405 ⟹ XP_038944333

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,374 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,034 (-)	NCBI

RefSeq Acc Id:

XM_039088406 ⟹ XP_038944334

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,372 (-)	NCBI
mRatBN7.2	11	37,312,337 - 37,327,029 (-)	NCBI

RefSeq Acc Id:

XM_063270575 ⟹ XP_063126645

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,795,450 (-)	NCBI

RefSeq Acc Id:

XM_063270576 ⟹ XP_063126646

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,373 (-)	NCBI

RefSeq Acc Id:

XM_063270577 ⟹ XP_063126647

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,349 (-)	NCBI

RefSeq Acc Id:

XM_063270578 ⟹ XP_063126648

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,371 (-)	NCBI

RefSeq Acc Id:

XM_063270579 ⟹ XP_063126649

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,372 (-)	NCBI

RefSeq Acc Id:

XM_063270580 ⟹ XP_063126650

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	50,781,697 - 50,796,349 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100575	(Get FASTA)	NCBI Sequence Viewer
	NP_001388363	(Get FASTA)	NCBI Sequence Viewer
	XP_006248229	(Get FASTA)	NCBI Sequence Viewer
	XP_006248231	(Get FASTA)	NCBI Sequence Viewer
	XP_006248234	(Get FASTA)	NCBI Sequence Viewer
	XP_006248236	(Get FASTA)	NCBI Sequence Viewer
	XP_038944328	(Get FASTA)	NCBI Sequence Viewer
	XP_038944329	(Get FASTA)	NCBI Sequence Viewer
	XP_038944331	(Get FASTA)	NCBI Sequence Viewer
	XP_038944332	(Get FASTA)	NCBI Sequence Viewer
	XP_038944333	(Get FASTA)	NCBI Sequence Viewer
	XP_038944334	(Get FASTA)	NCBI Sequence Viewer
	XP_063126645	(Get FASTA)	NCBI Sequence Viewer
	XP_063126646	(Get FASTA)	NCBI Sequence Viewer
	XP_063126647	(Get FASTA)	NCBI Sequence Viewer
	XP_063126648	(Get FASTA)	NCBI Sequence Viewer
	XP_063126649	(Get FASTA)	NCBI Sequence Viewer
	XP_063126650	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM10982	(Get FASTA)	NCBI Sequence Viewer
	EDM10983	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000049174
	ENSRNOP00000049174.5
	ENSRNOP00000076506
	ENSRNOP00000076506.1
	ENSRNOP00000079938
	ENSRNOP00000079938.1

RefSeq Acc Id:	NP_001100575 ⟸ NM_001107105
- Peptide Label:	isoform 2
- UniProtKB:	D3ZVF2 (UniProtKB/TrEMBL), A6IQH9 (UniProtKB/TrEMBL), A6IQI0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGLLHYINPAHAISLLSALNEERLKGQLCDVLLIVGDQKFRAHKNVLAASSEYFQSLFTNKEN EAQTVFQLDFCEPDAFDNVLNYIYSSSLFVEKGSLAAVQELGYSLGISFLTNIVAKAPQAPFPA CPNRKRVPVEDDETTSQKRSVIVCQGRSEVPGKASGPAMQDLSHAARASPSGSVKTSTSKPHVA KPPEQLHSLSLTEKSWTKESAAVYAKSLEQPGALDDPNRGSLVKRTTVLPPKPSQDREATDDKP GVSSQLPKGKAIELALKRPRPPVLSLHSSSETPYLLKETSKGGGQGEDRNLLYYSKLGLVVPSG GPASANQSIDRSGPLVKSLLRRSLSMDSQVPVYSPSLDLKSSQGSSSAANEAPGSVFCAMSQKS SLKDCSEKKVLDDRPQVLQPHRLRSFSASQSTDREEASPVTEVRIKTEPSSPLSDPSDIIRVTV GGDAAAAAATRELPLKTEEDQRDMSRLPAKRRFQTDRRSPLKKPKANEHGPAVSEENCEEGRSP PSLDSNFPDSDLNREEFEQGNHERLCRNATVCPYCSLRFFSPALKQEHEDRCEYKKLTCLECMR TFKSSFSIWRHQVEVHNQNNMALAENFSMPTLDHNGEVAAASRPQTEPSKVNHVATPKEDTAFS DSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKEEPVEEAEEEAPEVSAAPREAGPSKEAGLWPCE KCGKMFTAHKQLERHQELLCSVKPFICHVCHKAFRTNFRLWSHFQSHMSQATEEPVQKEPEVCP VPTNSPSPPPLPPPPPLPKIQPLEPDSPTGLPENPAPATEKLFAPQESDTLFYHAPPLSAITFK RQFMCKLCHRTFKTAFSLWSHEQTHN hide sequence

RefSeq Acc Id:	XP_006248236 ⟸ XM_006248174
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZPL5 (UniProtKB/TrEMBL), A6IQI0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGLLHYINPAHAISLLSALNEERLKGQLCDVLLIVGDQKFRAHKNVLAASSEYFQSLFTNKEN EAQTVFQLDFCEPDAFDNVLNYIYSSSLFVEKGSLAAVQELGYSLGISFLTNIVAKAPQAPFPA CPNRKRVPVEDDETTSQKRSVIVCQGRSEVPGKASGPAMQDLSHAARASPSGSVKTSTSKPHVA KPPEQLHSLSLTEKSWTKESAAVYAKSLEQPGALDDPNRGSLVKRTTVLPPKPSQDREATDDKP GVSSQLPKGKAIELALKRPRPPVLSLHSSSETPYLLKETSKGGGQGEDRNLLYYSKLGLVVPSG GPASANQSIDRSGPLVKSLLRRSLSMDSQVPVYSPSLDLKSSQGSSSAANEAPGSVFCAMSQKS SLKDCSEKKVLDDRPQVLQPHRLRSFSASQSTDREEASPVTEVRIKTEPSSPLSDPSDIIRVTV GGDAAAAAATRELPLKTEEDQRDMSRLPAKRRFQTDRRSPLKKPKANEHGPAVSEENCEEGRSP PSLDSNFPDSDLNREEFGELEGTRPNKKFKCKHCLKIFRSTAGLHRHVNMYHNPEKPYACDICH KRFHTNFKVWTHCQTQHGIVKNPSPASSSHAVLDEKFQRKLIDIVREREIKKALIIKLRRSKPG FQGQSSSPAQQVIKRNLRSRAKGAYICAYCGKAYRFLSQFKQHIKMHPGERPLGVSRAAKPKAR AVESKEVYPCRLCNAKLSSLLEQGNHERLCRNATVCPYCSLRFFSPALKQEHEDRCEYKKLTCL ECMRTFKSSFSIWRHQVEVHNQNNMALAENFSMPTLDHNGEVAAASRPQTEPSKVNHVATPKED TAFSDSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKEEPVEEAEEEAPEVSAAPREAGPSKEAGL WPCEKCGKMFTAHKQLERHQELLCSVKPFICHVCHKAFRTNFRLWSHFQSHMSQATEEPVQKEP EVCPVPTNSPSPPPLPPPPPLPKIQPLEPDSPTGLPENPAPATEKLFAPQESDTLFYHAPPLSA ITFKRQFMCKLCHRTFKTAFSLWSHEQTHN hide sequence

RefSeq Acc Id:	XP_006248231 ⟸ XM_006248169
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5Y585 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMHSVQRAHKHSGEEERRKMCACQINCRMEGLLHYINPAHAISLLSALNEERLKGQLCDVLLIV GDQKFRAHKNVLAASSEYFQSLFTNKENEAQTVFQLDFCEPDAFDNVLNYIYSSSLFVEKGSLA AVQELGYSLGISFLTNIVAKAPQAPFPACPNRKRVPVEDDETTSQKRSVIVCQGRSEVPGKASG PAMQDLSHAARASPSGSVKTSTSKPHVAKPPEQLHSLSLTEKSWTKESAAVYAKSLEQPGALDD PNRGSLVKRTTVLPPKPSQDREATDDKPGVSSQLPKGKAIELALKRPRPPVLSLHSSSETPYLL KETSKGGGQGEDRNLLYYSKLGLVVPSGGPASANQSIDRSGPLVKSLLRRSLSMDSQVPVYSPS LDLKSSQGSSSAANEAPGSVFCAMSQKSSLKDCSEKKVLDDRPQVLQPHRLRSFSASQSTDREE ASPVTEVRIKTEPSSPLSDPSDIIRVTVGGDAAAAAATRELPLKTEEDQRDMSRLPAKRRFQTD RRSPLKKPKANEHGPAVSEENCEEGRSPPSLDSNFPDSDLNREEFGELEGTRPNKKFKCKHCLK IFRSTAGLHRHVNMYHNPEKPYACDICHKRFHTNFKVWTHCQTQHGIVKNPSPASSSHAVLDEK FQRKLIDIVREREIKKALIIKLRRSKPGFQGQSSSPAQQVIKRNLRSRAKGAYICAYCGKAYRF LSQFKQHIKMHPGERPLGVSRAAKPKARAVESKEVYPCRLCNAKLSSLLEQGNHERLCRNATVC PYCSLRFFSPALKQEHEDRCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMALAENFSMPTL DHNGEVAAASRPQTEPSKVNHVATPKEDTAFSDSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKE EPVEEAEEEAPEVSAAPREAGPSKEAGLWPCEKCGKMFTAHKQLERHQELLCSVKPFICHVCHK AFRTNFRLWSHFQSHMSQATEEPVQKEPEVCPVPTNSPSPPPLPPPPPLPKIQPLEPDSPTGLP ENPAPATEKLFAPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFKTAFSLWSHEQTHN hide sequence

RefSeq Acc Id:	XP_006248234 ⟸ XM_006248172
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZPL5 (UniProtKB/TrEMBL), A6IQI0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGLLHYINPAHAISLLSALNEERLKGQLCDVLLIVGDQKFRAHKNVLAASSEYFQSLFTNKEN EAQTVFQLDFCEPDAFDNVLNYIYSSSLFVEKGSLAAVQELGYSLGISFLTNIVAKAPQAPFPA CPNRKRVPVEDDETTSQKRSVIVCQGRSEVPGKASGPAMQDLSHAARASPSGSVKTSTSKPHVA KPPEQLHSLSLTEKSWTKESAAVYAKSLEQPGALDDPNRGSLVKRTTVLPPKPSQDREATDDKP GVSSQLPKGKAIELALKRPRPPVLSLHSSSETPYLLKETSKGGGQGEDRNLLYYSKLGLVVPSG GPASANQSIDRSGPLVKSLLRRSLSMDSQVPVYSPSLDLKSSQGSSSAANEAPGSVFCAMSQKS SLKDCSEKKVLDDRPQVLQPHRLRSFSASQSTDREEASPVTEVRIKTEPSSPLSDPSDIIRVTV GGDAAAAAATRELPLKTEEDQRDMSRLPAKRRFQTDRRSPLKKPKANEHGPAVSEENCEEGRSP PSLDSNFPDSDLNREEFGELEGTRPNKKFKCKHCLKIFRSTAGLHRHVNMYHNPEKPYACDICH KRFHTNFKVWTHCQTQHGIVKNPSPASSSHAVLDEKFQRKLIDIVREREIKKALIIKLRRSKPG FQGQSSSPAQQVIKRNLRSRAKGAYICAYCGKAYRFLSQFKQHIKMHPGERPLGVSRAAKPKAR AVESKEVYPCRLCNAKLSSLLEQGNHERLCRNATVCPYCSLRFFSPALKQEHEDRCEYKKLTCL ECMRTFKSSFSIWRHQVEVHNQNNMALAENFSMPTLDHNGEVAAASRPQTEPSKVNHVATPKED TAFSDSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKEEPVEEAEEEAPEVSAAPREAGPSKEAGL WPCEKCGKMFTAHKQLERHQELLCSVKPFICHVCHKAFRTNFRLWSHFQSHMSQATEEPVQKEP EVCPVPTNSPSPPPLPPPPPLPKIQPLEPDSPTGLPENPAPATEKLFAPQESDTLFYHAPPLSA ITFKRQFMCKLCHRTFKTAFSLWSHEQTHN hide sequence

RefSeq Acc Id:	XP_006248229 ⟸ XM_006248167
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5Y585 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMHSVQRAHKHSGEEERRKMCACQINCRMEGLLHYINPAHAISLLSALNEERLKGQLCDVLLIV GDQKFRAHKNVLAASSEYFQSLFTNKENEAQTVFQLDFCEPDAFDNVLNYIYSSSLFVEKGSLA AVQELGYSLGISFLTNIVAKAPQAPFPACPNRKRVPVEDDETTSQKRSVIVCQGRSEVPGKASG PAMQDLSHAARASPSGSVKTSTSKPHVAKPPEQLHSLSLTEKSWTKESAAVYAKSLEQPGALDD PNRGSLVKRTTVLPPKPSQDREATDDKPGVSSQLPKGKAIELALKRPRPPVLSLHSSSETPYLL KETSKGGGQGEDRNLLYYSKLGLVVPSGGPASANQSIDRSGPLVKSLLRRSLSMDSQVPVYSPS LDLKSSQGSSSAANEAPGSVFCAMSQKSSLKDCSEKKVLDDRPQVLQPHRLRSFSASQSTDREE ASPVTEVRIKTEPSSPLSDPSDIIRVTVGGDAAAAAATRELPLKTEEDQRDMSRLPAKRRFQTD RRSPLKKPKANEHGPAVSEENCEEGRSPPSLDSNFPDSDLNREEFGELEGTRPNKKFKCKHCLK IFRSTAGLHRHVNMYHNPEKPYACDICHKRFHTNFKVWTHCQTQHGIVKNPSPASSSHAVLDEK FQRKLIDIVREREIKKALIIKLRRSKPGFQGQSSSPAQQVIKRNLRSRAKGAYICAYCGKAYRF LSQFKQHIKMHPGERPLGVSRAAKPKARAVESKEVYPCRLCNAKLSSLLEQGNHERLCRNATVC PYCSLRFFSPALKQEHEDRCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMALAENFSMPTL DHNGEVAAASRPQTEPSKVNHVATPKEDTAFSDSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKE EPVEEAEEEAPEVSAAPREAGPSKEAGLWPCEKCGKMFTAHKQLERHQELLCSVKPFICHVCHK AFRTNFRLWSHFQSHMSQATEEPVQKEPEVCPVPTNSPSPPPLPPPPPLPKIQPLEPDSPTGLP ENPAPATEKLFAPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFKTAFSLWSHEQTHN hide sequence

RefSeq Acc Id:

ENSRNOP00000049174 ⟸ ENSRNOT00000041177

RefSeq Acc Id:	XP_038944333 ⟸ XM_039088405
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038944332 ⟸ XM_039088404
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZPL5 (UniProtKB/TrEMBL), A6IQI0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944329 ⟸ XM_039088401
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5Y585 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944328 ⟸ XM_039088400
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5Y585 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944331 ⟸ XM_039088403
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5Y585 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944334 ⟸ XM_039088406
- Peptide Label:	isoform X6

RefSeq Acc Id:

ENSRNOP00000076506 ⟸ ENSRNOT00000102067

RefSeq Acc Id:

ENSRNOP00000079938 ⟸ ENSRNOT00000116969

RefSeq Acc Id:	NP_001388363 ⟸ NM_001401434
- Peptide Label:	isoform 1
- UniProtKB:	A0A8I5Y585 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063126646 ⟸ XM_063270576
- Peptide Label:	isoform X3
- UniProtKB:	A6IQH9 (UniProtKB/TrEMBL), D3ZVF2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063126649 ⟸ XM_063270579
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063126648 ⟸ XM_063270578
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063126650 ⟸ XM_063270580
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063126647 ⟸ XM_063270577
- Peptide Label:	isoform X3
- UniProtKB:	A6IQH9 (UniProtKB/TrEMBL), D3ZVF2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063126645 ⟸ XM_063270575
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZPL5 (UniProtKB/TrEMBL)

Protein Domains

BTB C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZVF2-F1-model_v2	AlphaFold	D3ZVF2	1-886	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698097

Promoter ID:

EPDNEW_R8622

Type:

multiple initiation site

Name:

Zbtb21_1

Description:

zinc finger and BTB domain containing 21

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	11	38,457,367 - 38,457,427	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310841	AgrOrtholog
BioCyc Gene	G2FUF-21666	BioCyc
Ensembl Genes	ENSRNOG00000001623	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000041177	ENTREZGENE
	ENSRNOT00000041177.6	UniProtKB/TrEMBL
	ENSRNOT00000102067	ENTREZGENE
	ENSRNOT00000102067.1	UniProtKB/TrEMBL
	ENSRNOT00000116969.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	BTB/POZ-like	UniProtKB/TrEMBL
	BTB/POZ_fold	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_6	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:304056	UniProtKB/TrEMBL
NCBI Gene	304056	ENTREZGENE
PANTHER	ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 21	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
Pfam	BTB	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
	zf_C2H2_6	UniProtKB/TrEMBL
PhenoGen	Zbtb21	PhenoGen
PROSITE	BTB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000001623	RatGTEx
SMART	BTB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	BTB/POZ_fold	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A8I5Y585	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZPL5	ENTREZGENE, UniProtKB/TrEMBL
	A6IQH9	ENTREZGENE, UniProtKB/TrEMBL
	A6IQI0	ENTREZGENE, UniProtKB/TrEMBL
	D3ZVF2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-06-28	Zbtb21	zinc finger and BTB domain containing 21	Zfp295	zinc finger protein 295	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-07-19	Zfp295	zinc finger protein 295	Znf295	zinc finger protein 295	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-09	Znf295	zinc finger protein 295	Zfp295	zinc finger protein 295	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Zfp295	zinc finger protein 295	Zfp295_predicted	zinc finger protein 295 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Zfp295_predicted	zinc finger protein 295 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar