Qtrt2 (queuine tRNA-ribosyltransferase accessory subunit 2)

Gene: Qtrt2 (queuine tRNA-ribosyltransferase accessory subunit 2) Rattus norvegicus

Analyze

Symbol:

Qtrt2

Name:

queuine tRNA-ribosyltransferase accessory subunit 2

RGD ID:

1310054

Description:

Predicted to enable protein heterodimerization activity; protein homodimerization activity; and tRNA binding activity. Predicted to be involved in tRNA-guanine transglycosylation. Predicted to be located in mitochondrion. Predicted to be part of transferase complex. Orthologous to human QTRT2 (queuine tRNA-ribosyltransferase accessory subunit 2); INTERACTS WITH (+)-schisandrin B; amphetamine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC288364; Qtrtd1; queuine tRNA-ribosyltransferase domain containing 1; queuine tRNA-ribosyltransferase subunit QTRTD1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	70,312,352 - 70,343,139 (+)	NCBI		GRCr8
mRatBN7.2	11	56,806,417 - 56,837,239 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	56,806,385 - 56,837,228 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	65,632,383 - 65,650,397 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	58,294,634 - 58,312,646 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	57,343,262 - 57,361,262 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	61,748,822 - 61,779,631 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	61,748,878 - 61,779,631 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	60,882,637 - 60,913,401 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	58,386,436 - 58,402,983 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	58,442,080 - 58,460,354 (+)	NCBI
Celera	11	56,372,175 - 56,390,188 (+)	NCBI		Celera
Cytogenetic Map	11	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

17beta-estradiol (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

aflatoxin B1 (ISO)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

cannabidiol (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

diethylstilbestrol (ISO)

doxorubicin (ISO)

enzyme inhibitor (ISO)

ethyl methanesulfonate (ISO)

fluoranthene (ISO)

folic acid (ISO)

ivermectin (ISO)

lead diacetate (ISO)

lead(0) (ISO)

paracetamol (ISO)

paraquat (EXP)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

resveratrol (ISO)

sulforaphane (ISO)

sunitinib (ISO)

tetrachloromethane (EXP,ISO)

trichostatin A (ISO)

troglitazone (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

tRNA-guanine transglycosylation (IBA,ISO)

Cellular Component

cytoplasm (ISO)

mitochondrial outer membrane (IEA)

mitochondrion (ISO)

protein-containing complex (ISO)

transferase complex (ISO)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

protein heterodimerization activity (ISO)

protein homodimerization activity (ISO)

tRNA binding (ISO)

tRNA-guanosine(34) queuine transglycosylase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19414587	PMID:20354154

Genomics

Comparative Map Data

Qtrt2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	70,312,352 - 70,343,139 (+)	NCBI		GRCr8
mRatBN7.2	11	56,806,417 - 56,837,239 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	56,806,385 - 56,837,228 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	65,632,383 - 65,650,397 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	58,294,634 - 58,312,646 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	57,343,262 - 57,361,262 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	61,748,822 - 61,779,631 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	61,748,878 - 61,779,631 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	60,882,637 - 60,913,401 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	58,386,436 - 58,402,983 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	58,442,080 - 58,460,354 (+)	NCBI
Celera	11	56,372,175 - 56,390,188 (+)	NCBI		Celera
Cytogenetic Map	11	q21	NCBI

QTRT2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	114,056,737 - 114,088,422 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	114,005,833 - 114,088,422 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	113,775,584 - 113,807,269 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	115,258,301 - 115,289,959 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	115,258,300 - 115,289,956	NCBI
Celera	3	112,184,038 - 112,215,695 (+)	NCBI		Celera
Cytogenetic Map	3	q13.31	NCBI
HuRef	3	111,149,602 - 111,181,262 (+)	NCBI		HuRef
CHM1_1	3	113,738,942 - 113,770,623 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	116,778,012 - 116,809,687 (+)	NCBI		T2T-CHM13v2.0

Qtrt2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	43,681,879 - 43,710,063 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	43,681,770 - 43,747,172 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	43,861,407 - 43,889,797 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	43,861,407 - 43,926,809 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	43,861,520 - 43,889,789 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	43,780,739 - 43,809,008 (-)	NCBI		MGSCv36	mm8
Celera	16	44,217,238 - 44,245,427 (-)	NCBI		Celera
Cytogenetic Map	16	B4	NCBI
cM Map	16	28.44	NCBI

Qtrt2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955427	14,138,161 - 14,171,709 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955427	14,139,024 - 14,169,402 (+)	NCBI	ChiLan1.0	ChiLan1.0

QTRT2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	112,048,159 - 112,079,745 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	112,052,937 - 112,084,527 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	111,194,231 - 111,225,895 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	118,114,739 - 118,146,349 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	118,114,739 - 118,146,349 (+)	Ensembl	panpan1.1		panPan2

QTRT2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	18,317,322 - 18,341,962 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	18,317,348 - 18,349,988 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	18,425,344 - 18,569,319 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	18,563,000 - 18,707,657 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	18,563,070 - 18,595,453 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	18,366,002 - 18,515,450 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	18,418,039 - 18,562,342 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	18,962,963 - 19,107,555 (+)	NCBI		UU_Cfam_GSD_1.0

Qtrt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	135,970,138 - 135,995,473 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936536	1,526,418 - 1,551,928 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936536	1,526,408 - 1,551,922 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

QTRT2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	145,853,371 - 145,879,845 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	145,853,367 - 145,879,863 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	155,445,574 - 155,472,647 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

QTRT2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	66,779,065 - 66,809,427 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	66,778,116 - 66,809,412 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	99,656,986 - 99,687,695 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Qtrt2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624731	34,407,484 - 34,449,138 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Qtrt2
59 total Variants

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	1	69446234	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	1041931	66113562	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	18976208	86241447	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	22959403	67959403	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	23280456	68280456	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	23280456	68280456	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	27672410	82846715	Rat
1300130	Rf20	Renal function QTL 20	4.44		kidney glomerulus integrity trait (VT:0010546)	kidney glomerulus diameter (CMO:0001166)	11	29528418	60324829	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	29528418	82566702	Rat
2298551	Neuinf10	Neuroinflammation QTL 10	3.7		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	11	31239134	78851519	Rat
70180	BpQTLcluster10	Blood pressure QTL cluster 10	3.19		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	11	34918041	79918041	Rat
1300135	Rf19	Renal function QTL 19	3.38		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	11	40946188	82566702	Rat
2312566	Glom20	Glomerulus QTL 20	3.6	0.001	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	44285759	82566702	Rat
1581565	Pur10	Proteinuria QTL 10		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	44803318	82846466	Rat
1581572	Uae35	Urinary albumin excretion QTL 35		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	44803318	82846466	Rat
4889859	Pur28	Proteinuria QTL 28	19.5	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	11	45459323	75190161	Rat
724561	Plsm4	Polydactyly-luxate syndrome (PLS) morphotypes QTL 4		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	11	54457534	86241447	Rat
4889521	Gluco62	Glucose level QTL 62	2.82	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	55136729	82993457	Rat
7411658	Foco27	Food consumption QTL 27	16.2	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	11	56351424	86241447	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		2	6	4		4			26	12	26
Low	3	41	51	37	19	37	8	11	48	23	15	11	8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001305153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005491014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC114526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000089340 ⟹ ENSRNOP00000070976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	11	61,761,613 - 61,777,942 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000091598 ⟹ ENSRNOP00000072467

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	56,817,760 - 56,837,228 (+)	Ensembl
Rnor_6.0 Ensembl	11	61,761,616 - 61,777,942 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000093552 ⟹ ENSRNOP00000076283

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	56,806,385 - 56,837,228 (+)	Ensembl
Rnor_6.0 Ensembl	11	61,748,883 - 61,779,631 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000093719 ⟹ ENSRNOP00000076331

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	56,806,385 - 56,837,228 (+)	Ensembl
Rnor_6.0 Ensembl	11	61,748,878 - 61,779,631 (+)	Ensembl

RefSeq Acc Id:

NM_001305153 ⟹ NP_001292082

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,325,121 - 70,343,135 (+)	NCBI
mRatBN7.2	11	56,819,219 - 56,837,235 (+)	NCBI
Rnor_6.0	11	61,761,613 - 61,779,627 (+)	NCBI
Celera	11	56,372,175 - 56,390,188 (+)	NCBI

Sequence:

show sequence

ATGATGAAGCTGAATCTCACCAAAGTTGTTAACGGCTGTCGTCTAGGAAAAATACAAAACCTGG
GCAAAGCAGGGGACTGCACAGTGGACATTCCAGGCTGTCTGCTCTACACGAGGACTGGCTCTGC
CCCACACCTGACACATCAGACACTGCATAATATCCATGGGGTCCCAGCCATGGCCCAGCTCACA
CTGTCATCCCTAGCAGAACATCATGAAGTCTTGGCAGAATATAAGAAAGGAATTGGAAGCTTTA
TAGGCATGCCAGACTCGCTCTTCTACTGTTCCCTGCACGATCCAGTCAGCCCTGGCCCACCTGG
TTACGTAACAAATAAGTCTGTGTCTGTGTGGGGTTTTGGAGGTCGAGTGGAAATGACCGTTTCC
AAGTTCATGGCAATTCAGGAGGCCCTGCAGCCTGATTGGTTCCAATGCCTCTCAGATGGGGAGG
CATCTTGTGCAGAGGCAACTTCCATCAAAAGGGCCAGGAAGTCTGTGGACCGGTCGCTTCTGTT
CCTGGACAGCTGTTTGCGACTGCAGGAGGACTCTGAGGTCCTTCAGAAAAGCGTGATCATTGGA
GTGATTGAAGGTGGAGATGTGACGGAAGAGAGGTTGAGGTCGGCGCGAGAGACAGCCAAGCGGC
CCGTGGGGGGCTTCCTTCTGGACGGCTTCCAAGGGGGTCCAGCAGTCACAGAAACCAGGCTGCA
CTTGCTGTCATCAGTCACTGCCGAGCTGCCGGAGGACAAACCAAGGCTCATCTGTGGTGTCAGC
CGGCCAGATGAAGTGCTCGAGTGTATTGAAAGGGGAGTGGACTTGTTTGAGAGTTTTTTCCCAT
ATCAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGCCAGCTGAATCCTGAGGA
GACATTACTGCAACAAAATGGAATCCAAGAAGAAATAAAATGTTTGGATCAAATAAAGAAAATG
GAAGCAACTGGGTGCAACCAAGAGATGACATCATTTGAAATCAATCTGAAGGAGAAAAAGTACC
AGGAAGACTTTCAGCCTCTCGTAAGAGGGTGCTCCTGTTACTGCTGTACGAACCACACTCGTGC
ATACGTCCACCATCTGCTGGTGACCAACGAGCTGCTGGCCAGTGTCCTGCTGATGATGCACAAC
TTCGAGCACTACTTCCGGTTTTTCTGCTCCATCCGAGAGGCACTAAAGAGTGACACGCTGGCAC
AGCTGAAAGAGCTCATCCGCAGACAGATGTCCTGAGAACTGGAAAGACAAACCTGTCCCATCTT
TGGAAACAGTGAAGTGGCAGAGATCTGAGCTTTCAGCAGTTGTGGTGGGACTGAAGAGCATCTG
CCCCACAGGAGTGCACCCACAGGAGTGTGGAGGAAGGCCTTCTGCAGCTTTCCTGGACCAGATC
GATCAGAACTGTGACTTTACATTTTTCTAGGTTTATTCTGCTAGTGGGTAAATTCCTTTAGTTG
AAGACAAAAATATTTGATATGAGAGAGACTTGAAAGGATTTGAGGTTCTAGAAACCACTGAGGA
TGGATGAGACCTGAGTGAGGCCCTAGTAGAGATGACTGTCATAGCTGGAGGCACAGCTATTTCC
TAGAGAAGTCTAGCTGATTCTACAGGTTTTTGTTTGTTTCTCCTCATGCTGTCAGGGGCTTTGG
GGCATACCTTTGTCTTCAGGGCTACCACAGCAGGACAGTCACTCAGAAGGGCTCTCCTGCCTCA
ACCATGCTCATCTCTCCAAAGACTATGGGGCCCAAGTCATGCTTTCGTGATCTGTTAACTTCAT
TTGGCTACAAGGCTCTGTGAACTTGTCTTCTGAGAGCCGCTGTGCTTGCCTGTTAGGAACCAAA
TACTGCCTGGCTGCTCTGCCTGGTGCAGATCCAGCATGACCTGCCCAGGCTCATAGACTGTGTG
TCTAGCTCTGTCACTAGGGGGAGATTCCTTTGCTGTGTGTTTATGTGGCTAGAATCCTGGCCTG
ACAGCAGATTCCATTCCACTCAGCCGTAAGCTCAGGCTAATCCTGCCTTTTCTACCTTTCTGTG
CCGGTTCCCTGATAGTAAACGGGGACAGGCATGGTAGGTGGAAGCAAAATGTTGACCATCTCCG
TCATGCCTTTCACCCTTCTCTACTAGTCACTGCCGGCCTGACCCTTTCCCTCTCTCTCTCCCCT
TCTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTGGTTTTTTGTTTGGTTTTTATGCAGCTATAGT
TTGTCCTGTGGATCTTGAAGTGATTGGTGGGTGAATCAACCTTCTACAGACCTGAGGCTGGTTG
TCCCTCTTGGGTTCTCTGTAATTGTGTATTTTTGTTGGTGGCATGATAGGGCTTTTTTTTTAAT
GTATCTTTCTATATTTATCAATTTTTCTAAGGAGTACATAAAACATACATGTACGTATATGTAG
TTTTTATAAAAATAATGCATTTTAAAAGATTCATTTTTGTAGGTATAAGAAATGTGTTTCTTAT
ATTTTATTGGTTTTTAATTTATAGAGGACATTACTGAACATCGTGTACAGTAATTATGTAGTAA
CTGCATTTTTATGTGTTGGAGATCCAACGTTGTTTGTCCTTTTTGTGGTATGACTTCTCAATGA
ATGCAAGGGAGTCATAGAATGCAGACGTACAGATAGTTTCTGTTCTCAGTGATCCATGGGAATG
TGTTTTGTACTTGTTTATATGTTTTATTCTTGGTCAAGACCAAACCTATTATTGAAGGATTATT
AGTAAATATCTAAAATCCCATATAAATTTATGAGTTTTATTTATGTCTAAAACACTGAAAATTC
TGTTAAACGTTGTTCAATTCCCTGGGTCTTTTTCTTATTAGCACATTTGAAAAGATTCTTTCCT
TTTATGTTGTAAATGTATGAAGGCTAACAAGCAATAAACATTTTTAATTAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006248320 ⟹ XP_006248382

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,312,575 - 70,343,139 (+)	NCBI
mRatBN7.2	11	56,806,419 - 56,837,239 (+)	NCBI
Rnor_6.0	11	61,748,822 - 61,779,631 (+)	NCBI
Rnor_5.0	11	60,882,637 - 60,913,401 (+)	NCBI

Sequence:

show sequence

TGATGATGCAGAACTTCCTGATTGGCTCTGCGGCGGAGGCGTTGGTTTAGTGGGCCAAGAGTTC
TGGGAGCCGGAACACGTGTTATCGCTTGCGAAGAGTTTAGGGGACCTGAAGGTACCGAGTTTTG
TAATCTACCGGTTTCTGGCAGCTCAGAGTCTCCTAGCGAGATTGCCGATCACTTCTCAGAAAAG
AAAGGACCTCCTTTCTCCTGGCCTCTGCTGGAGCGTAAGCTTCTCAGCTGCAAGTTTTTCTGAA
TTTAGCAGAACCCAGACGAATCCCTAATGATGAAGCTGAATCTCACCAAAGTTGTTAACGGCTG
TCGTCTAGGAAAAATACAAAACCTGGGCAAAGCAGGGGACTGCACAGTGGACATTCCAGGCTGT
CTGCTCTACACGAGGACTGGCTCTGCCCCACACCTGACACATCAGACACTGCATAATATCCATG
GGGTCCCAGCCATGGCCCAGCTCACACTGTCATCCCTAGCAGAACATCATGAAGTCTTGGCAGA
ATATAAGAAAGGAATTGGAAGCTTTATAGGCATGCCAGACTCGCTCTTCTACTGTTCCCTGCAC
GATCCAGTCAGCCCTGGCCCACCTGGTTACGTAACAAATAAGTCTGTGTCTGTGTGGGGTTTTG
GAGGTCGAGTGGAAATGACCGTTTCCAAGTTCATGGCAATTCAGGAGGCCCTGCAGCCTGATTG
GTTCCAATGCCTCTCAGATGGGGAGGCATCTTGTGCAGAGGCAACTTCCATCAAAAGGGCCAGG
AAGTCTGTGGACCGGTCGCTTCTGTTCCTGGACAGCTGTTTGCGACTGCAGGAGGACTCTGAGG
TCCTTCAGAAAAGCGTGATCATTGGAGTGATTGAAGGTGGAGATGTGACGGAAGAGAGGTTGAG
GTCGGCGCGAGAGACAGCCAAGCGGCCCGTGGGGGGCTTCCTTCTGGACGGCTTCCAAGGGGGT
CCAGCAGTCACAGAAACCAGGCTGCACTTGCTGTCATCAGTCACTGCCGAGCTGCCGGAGGACA
AACCAAGGCTCATCTGTGGTGTCAGCCGGCCAGATGAAGTGCTCGAGTGTATTGAAAGGGGAGT
GGACTTGTTTGAGAGTTTTTTCCCATATCAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACC
TTTGATTGCCAGCTGAATCCTGAGGAGACATTACTGCAACAAAATGGAATCCAAGAAGAAATAA
AATGTTTGGATCAAATAAAGAAAATGGAAGCAACTGGGTGCAACCAAGAGATGACATCATTTGA
AATCAATCTGAAGGAGAAAAAGTACCAGGAAGACTTTCAGCCTCTCGTAAGAGGGTGCTCCTGT
TACTGCTGTACGAACCACACTCGTGCATACGTCCACCATCTGCTGGTGACCAACGAGCTGCTGG
CCAGTGTCCTGCTGATGATGCACAACTTCGAGCACTACTTCCGGTTTTTCTGCTCCATCCGAGA
GGCACTAAAGAGTGACACGCTGGCACAGCTGAAAGAGCTCATCCGCAGACAGATGTCCTGAGAA
CTGGAAAGACAAACCTGTCCCATCTTTGGAAACAGTGAAGTGGCAGAGATCTGAGCTTTCAGCA
GTTGTGGTGGGACTGAAGAGCATCTGCCCCACAGGAGTGCACCCACAGGAGTGTGGAGGAAGGC
CTTCTGCAGCTTTCCTGGACCAGATCGATCAGAACTGTGACTTTACATTTTTCTAGGTTTATTC
TGCTAGTGGGTAAATTCCTTTAGTTGAAGACAAAAATATTTGATATGAGAGAGACTTGAAAGGA
TTTGAGGTTCTAGAAACCACTGAGGATGGATGAGACCTGAGTGAGGCCCTAGTAGAGATGACTG
TCATAGCTGGAGGCACAGCTATTTCCTAGAGAAGTCTAGCTGATTCTACAGGTTTTTGTTTGTT
TCTCCTCATGCTGTCAGGGGCTTTGGGGCATACCTTTGTCTTCAGGGCTACCACAGCAGGACAG
TCACTCAGAAGGGCTCTCCTGCCTCAACCATGCTCATCTCTCCAAAGACTATGGGGCCCAAGTC
ATGCTTTCGTGATCTGTTAACTTCATTTGGCTACAAGGCTCTGTGAACTTGTCTTCTGAGAGCC
GCTGTGCTTGCCTGTTAGGAACCAAATACTGCCTGGCTGCTCTGCCTGGTGCAGATCCAGCATG
ACCTGCCCAGGCTCATAGACTGTGTGTCTAGCTCTGTCACTAGGGGGAGATTCCTTTGCTGTGT
GTTTATGTGGCTAGAATCCTGGCCTGACAGCAGATTCCATTCCACTCAGCCGTAAGCTCAGGCT
AATCCTGCCTTTTCTACCTTTCTGTGCCGGTTCCCTGATAGTAAACGGGGACAGGCATGGTAGG
TGGAAGCAAAATGTTGACCATCTCCGTCATGCCTTTCACCCTTCTCTACTAGTCACTGCCGGCC
TGACCCTTTCCCTCTCTCTCTCCCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTGGTTTT
TTGTTTGGTTTTTATGCAGCTATAGTTTGTCCTGTGGATCTTGAAGTGATTGGTGGGTGAATCA
ACCTTCTACAGACCTGAGGCTGGTTGTCCCTCTTGGGTTCTCTGTAATTGTGTATTTTTGTTGG
TGGCATGATAGGGCTTTTTTTTTAATGTATCTTTCTATATTTATCAATTTTTCTAAGGAGTACA
TAAAACATACATGTACGTATATGTAGTTTTTATAAAAATAATGCATTTTAAAAGATTCATTTTT
GTAGGTATAAGAAATGTGTTTCTTATATTTTATTGGTTTTTAATTTATAGAGGACATTACTGAA
CATCGTGTACAGTAATTATGTAGTAACTGCATTTTTATGTGTTGGAGATCCAACGTTGTTTGTC
CTTTTTGTGGTATGACTTCTCAATGAATGCAAGGGAGTCATAGAATGCAGACGTACAGATAGTT
TCTGTTCTCAGTGATCCATGGGAATGTGTTTTGTACTTGTTTATATGTTTTATTCTTGGTCAAG
ACCAAACCTATTATTGAAGGATTATTAGTAAATATCTAAAATCCCATATAAATTTATGAGTTTT
ATTTATGTCTAAAACACTGAAAATTCTGTTAAACGTTGTTCAATTCCCTGGGTCTTTTTCTTAT
TAGCACATTTGAAAAGATTCTTTCCTTTTATGTTGTAAATGTATGAAGGCTAACAAGCAATAAA
CATTTTTAATTAAAAAAACAAA

hide sequence

RefSeq Acc Id:

XM_008768759 ⟹ XP_008766981

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,312,449 - 70,343,139 (+)	NCBI
mRatBN7.2	11	56,806,418 - 56,837,239 (+)	NCBI
Rnor_6.0	11	61,748,822 - 61,779,631 (+)	NCBI

Sequence:

show sequence

TGATGATGCAGAACTTCCTGATTGGCTCTGCGGCGGAGGCGTTGGTTTAGTGGGCCAAGAGTTC
TGGGAGCCGGAACACGTGTTATCGCTTGCGAAGAGTTTAGGGGACCTGAAGGTACCGAGTTTTG
TAATCTACCGGTTTCTGGCAGCTCAGAGTCTCCTAGCGAGATTGCCGATCACTTCTCAGAAAAG
AAAGGACCTCCTTTCTCCTGGCCTCTGCTGGAGCGTAAGCTTCTCAGCTGCAAGTTTTTCTGAA
TTTAGCAGAACCCAGACGAATCCCTAATGATGAAGCTGAATCTCACCAAAGTTGTTAACGGCTG
TCGTCTAGGAAAAATACAAAACCTGGGCAAAGCAGGGGACTGCACAGTGGACATTCCAGGCTGT
CTGCTCTACACGAGGACTGGCTCTGCCCCACACCTGACACATCAGACACTGCATAATATCCATG
GGGTCCCAGCCATGGCCCAGCTCACACTGTCATCCCTAGCAGAACATCATGAAGTCTTGGCAGA
ATATAAGAAAGGAATTGGAAGCTTTATAGGCATGCCAGACTCGCTCTTCTACTGTTCCCTGCAC
GATCCAGTCAGCCCTGGCCCACCTGGTTACGTAACAAATAAGTCTGTGTCTGTGTGGGGTTTTG
GAGGTCGAGTGGAAATGACCGTTTCCAAGTTCATGGCAATTCAGGAGGCCCTGCAGCCTGATTG
GTTCCAATGCCTCTCAGATGGGGAGGCATCTTGTGCAGAGGCAACTTCCATCAAAAGGGCCAGG
AAGTCTGTGGACCGGTCGCTTCTGTTCCTGGACAGCTGTTTGCGACTGCAGGAGGACTCTGAGG
TCCTTCAGAAAAGCGTGATCATTGGAGTGATTGAAGGTGGAGATGTGACGGAAGAGAGGTTGAG
GTCGGCGCGAGAGACAGCCAAGCGGCCCGTGGGGGGCTTCCTTCTGGACGGCTTCCAAGGGGGT
CCAGCAGTCACAGAAACCAGGCTGCACTTGCTGTCATCAGTCACTGCCGAGCTGCCGGAGGACA
AACCAAGGCCAGTGCTGGATTGGGATGCAGGCCAGCCTCATGGGAGGCTCATCTGTGGTGTCAG
CCGGCCAGATGAAGTGCTCGAGTGTATTGAAAGGGGAGTGGACTTGTTTGAGAGTTTTTTCCCA
TATCAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGCCAGCTGAATCCTGAGG
AGACATTACTGCAACAAAATGGAATCCAAGAAGAAATAAAATGTTTGGATCAAATAAAGAAAAT
GGAAGCAACTGGGTGCAACCAAGAGATGACATCATTTGAAATCAATCTGAAGGAGAAAAAGTAC
CAGGAAGACTTTCAGCCTCTCGTAAGAGGGTGCTCCTGTTACTGCTGTACGAACCACACTCGTG
CATACGTCCACCATCTGCTGGTGACCAACGAGCTGCTGGCCAGTGTCCTGCTGATGATGCACAA
CTTCGAGCACTACTTCCGGTTTTTCTGCTCCATCCGAGAGGCACTAAAGAGTGACACGCTGGCA
CAGCTGAAAGAGCTCATCCGCAGACAGATGTCCTGAGAACTGGAAAGACAAACCTGTCCCATCT
TTGGAAACAGTGAAGTGGCAGAGATCTGAGCTTTCAGCAGTTGTGGTGGGACTGAAGAGCATCT
GCCCCACAGGAGTGCACCCACAGGAGTGTGGAGGAAGGCCTTCTGCAGCTTTCCTGGACCAGAT
CGATCAGAACTGTGACTTTACATTTTTCTAGGTTTATTCTGCTAGTGGGTAAATTCCTTTAGTT
GAAGACAAAAATATTTGATATGAGAGAGACTTGAAAGGATTTGAGGTTCTAGAAACCACTGAGG
ATGGATGAGACCTGAGTGAGGCCCTAGTAGAGATGACTGTCATAGCTGGAGGCACAGCTATTTC
CTAGAGAAGTCTAGCTGATTCTACAGGTTTTTGTTTGTTTCTCCTCATGCTGTCAGGGGCTTTG
GGGCATACCTTTGTCTTCAGGGCTACCACAGCAGGACAGTCACTCAGAAGGGCTCTCCTGCCTC
AACCATGCTCATCTCTCCAAAGACTATGGGGCCCAAGTCATGCTTTCGTGATCTGTTAACTTCA
TTTGGCTACAAGGCTCTGTGAACTTGTCTTCTGAGAGCCGCTGTGCTTGCCTGTTAGGAACCAA
ATACTGCCTGGCTGCTCTGCCTGGTGCAGATCCAGCATGACCTGCCCAGGCTCATAGACTGTGT
GTCTAGCTCTGTCACTAGGGGGAGATTCCTTTGCTGTGTGTTTATGTGGCTAGAATCCTGGCCT
GACAGCAGATTCCATTCCACTCAGCCGTAAGCTCAGGCTAATCCTGCCTTTTCTACCTTTCTGT
GCCGGTTCCCTGATAGTAAACGGGGACAGGCATGGTAGGTGGAAGCAAAATGTTGACCATCTCC
GTCATGCCTTTCACCCTTCTCTACTAGTCACTGCCGGCCTGACCCTTTCCCTCTCTCTCTCCCC
TTCTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTGGTTTTTTGTTTGGTTTTTATGCAGCTATAG
TTTGTCCTGTGGATCTTGAAGTGATTGGTGGGTGAATCAACCTTCTACAGACCTGAGGCTGGTT
GTCCCTCTTGGGTTCTCTGTAATTGTGTATTTTTGTTGGTGGCATGATAGGGCTTTTTTTTTAA
TGTATCTTTCTATATTTATCAATTTTTCTAAGGAGTACATAAAACATACATGTACGTATATGTA
GTTTTTATAAAAATAATGCATTTTAAAAGATTCATTTTTGTAGGTATAAGAAATGTGTTTCTTA
TATTTTATTGGTTTTTAATTTATAGAGGACATTACTGAACATCGTGTACAGTAATTATGTAGTA
ACTGCATTTTTATGTGTTGGAGATCCAACGTTGTTTGTCCTTTTTGTGGTATGACTTCTCAATG
AATGCAAGGGAGTCATAGAATGCAGACGTACAGATAGTTTCTGTTCTCAGTGATCCATGGGAAT
GTGTTTTGTACTTGTTTATATGTTTTATTCTTGGTCAAGACCAAACCTATTATTGAAGGATTAT
TAGTAAATATCTAAAATCCCATATAAATTTATGAGTTTTATTTATGTCTAAAACACTGAAAATT
CTGTTAAACGTTGTTCAATTCCCTGGGTCTTTTTCTTATTAGCACATTTGAAAAGATTCTTTCC
TTTTATGTTGTAAATGTATGAAGGCTAACAAGCAATAAACATTTTTAATTAAAAAAACAAA

hide sequence

RefSeq Acc Id:

XM_008768760 ⟹ XP_008766982

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,312,449 - 70,343,139 (+)	NCBI
mRatBN7.2	11	56,806,417 - 56,837,239 (+)	NCBI
Rnor_6.0	11	61,748,822 - 61,779,631 (+)	NCBI

Sequence:

show sequence

TGATGATGCAGAACTTCCTGATTGGCTCTGCGGCGGAGGCGTTGGTTTAGTGGGCCAAGAGTTC
TGGGAGCCGGAACACGTGTTATCGCTTGCGAAGAGTTTAGGGGACCTGAAGGTACCGAGTTTTG
TAATCTACCGGTTTCTGGCAGCTCAGAGTCTCCTAGCGAGATTGCCGATCACTTCTCAGAAAAG
AAAGGACCTCCTTTCTCCTGGCCTCTGCTGGAGCGTAAGCTTCTCAGCTGCAAGTTTTTCTGAA
TTTAGCAGAACCCAGACGAATCCCTAATGATGAAGCTGAATCTCACCAAAGTTGTTAACGGCTG
TCGTCTAGGAAAAATACAAAACCTGGGCAAAGCAGGGGACTGCACAGTGGACATTCCAGGCTGT
CTGCTCTACACGAGGACTGGCTCTGCCCCACACCTGACACATCAGACACTGCATAATATCCATG
GGGTCCCAGCCATGGCCCAGCTCACACTGTCATCCCTAGCAGAACATCATGAAGTCTTGGCAGA
ATATAAGAAAGGAATTGGAAGCTTTATAGGCATGCCAGACTCGCTCTTCTACTGTTCCCTGCAC
GATCCAGTCAGCCCTGGCCCACCTGGTTACGTAACAAATAAGGTCCTTCAGAAAAGCGTGATCA
TTGGAGTGATTGAAGGTGGAGATGTGACGGAAGAGAGGTTGAGGTCGGCGCGAGAGACAGCCAA
GCGGCCCGTGGGGGGCTTCCTTCTGGACGGCTTCCAAGGGGGTCCAGCAGTCACAGAAACCAGG
CTGCACTTGCTGTCATCAGTCACTGCCGAGCTGCCGGAGGACAAACCAAGGCCAGTGCTGGATT
GGGATGCAGGCCAGCCTCATGGGAGGCTCATCTGTGGTGTCAGCCGGCCAGATGAAGTGCTCGA
GTGTATTGAAAGGGGAGTGGACTTGTTTGAGAGTTTTTTCCCATATCAAGTGACCGAGCGGGGC
TGTGCCCTGACTTTCACCTTTGATTGCCAGCTGAATCCTGAGGAGACATTACTGCAACAAAATG
GAATCCAAGAAGAAATAAAATGTTTGGATCAAATAAAGAAAATGGAAGCAACTGGGTGCAACCA
AGAGATGACATCATTTGAAATCAATCTGAAGGAGAAAAAGTACCAGGAAGACTTTCAGCCTCTC
GTAAGAGGGTGCTCCTGTTACTGCTGTACGAACCACACTCGTGCATACGTCCACCATCTGCTGG
TGACCAACGAGCTGCTGGCCAGTGTCCTGCTGATGATGCACAACTTCGAGCACTACTTCCGGTT
TTTCTGCTCCATCCGAGAGGCACTAAAGAGTGACACGCTGGCACAGCTGAAAGAGCTCATCCGC
AGACAGATGTCCTGAGAACTGGAAAGACAAACCTGTCCCATCTTTGGAAACAGTGAAGTGGCAG
AGATCTGAGCTTTCAGCAGTTGTGGTGGGACTGAAGAGCATCTGCCCCACAGGAGTGCACCCAC
AGGAGTGTGGAGGAAGGCCTTCTGCAGCTTTCCTGGACCAGATCGATCAGAACTGTGACTTTAC
ATTTTTCTAGGTTTATTCTGCTAGTGGGTAAATTCCTTTAGTTGAAGACAAAAATATTTGATAT
GAGAGAGACTTGAAAGGATTTGAGGTTCTAGAAACCACTGAGGATGGATGAGACCTGAGTGAGG
CCCTAGTAGAGATGACTGTCATAGCTGGAGGCACAGCTATTTCCTAGAGAAGTCTAGCTGATTC
TACAGGTTTTTGTTTGTTTCTCCTCATGCTGTCAGGGGCTTTGGGGCATACCTTTGTCTTCAGG
GCTACCACAGCAGGACAGTCACTCAGAAGGGCTCTCCTGCCTCAACCATGCTCATCTCTCCAAA
GACTATGGGGCCCAAGTCATGCTTTCGTGATCTGTTAACTTCATTTGGCTACAAGGCTCTGTGA
ACTTGTCTTCTGAGAGCCGCTGTGCTTGCCTGTTAGGAACCAAATACTGCCTGGCTGCTCTGCC
TGGTGCAGATCCAGCATGACCTGCCCAGGCTCATAGACTGTGTGTCTAGCTCTGTCACTAGGGG
GAGATTCCTTTGCTGTGTGTTTATGTGGCTAGAATCCTGGCCTGACAGCAGATTCCATTCCACT
CAGCCGTAAGCTCAGGCTAATCCTGCCTTTTCTACCTTTCTGTGCCGGTTCCCTGATAGTAAAC
GGGGACAGGCATGGTAGGTGGAAGCAAAATGTTGACCATCTCCGTCATGCCTTTCACCCTTCTC
TACTAGTCACTGCCGGCCTGACCCTTTCCCTCTCTCTCTCCCCTTCTTTTTTTTTTTTTTTTTT
TTTTTTTGGTTTGGTTTTTTGTTTGGTTTTTATGCAGCTATAGTTTGTCCTGTGGATCTTGAAG
TGATTGGTGGGTGAATCAACCTTCTACAGACCTGAGGCTGGTTGTCCCTCTTGGGTTCTCTGTA
ATTGTGTATTTTTGTTGGTGGCATGATAGGGCTTTTTTTTTAATGTATCTTTCTATATTTATCA
ATTTTTCTAAGGAGTACATAAAACATACATGTACGTATATGTAGTTTTTATAAAAATAATGCAT
TTTAAAAGATTCATTTTTGTAGGTATAAGAAATGTGTTTCTTATATTTTATTGGTTTTTAATTT
ATAGAGGACATTACTGAACATCGTGTACAGTAATTATGTAGTAACTGCATTTTTATGTGTTGGA
GATCCAACGTTGTTTGTCCTTTTTGTGGTATGACTTCTCAATGAATGCAAGGGAGTCATAGAAT
GCAGACGTACAGATAGTTTCTGTTCTCAGTGATCCATGGGAATGTGTTTTGTACTTGTTTATAT
GTTTTATTCTTGGTCAAGACCAAACCTATTATTGAAGGATTATTAGTAAATATCTAAAATCCCA
TATAAATTTATGAGTTTTATTTATGTCTAAAACACTGAAAATTCTGTTAAACGTTGTTCAATTC
CCTGGGTCTTTTTCTTATTAGCACATTTGAAAAGATTCTTTCCTTTTATGTTGTAAATGTATGA
AGGCTAACAAGCAATAAACATTTTTAATTAAAAAAACAAA

hide sequence

RefSeq Acc Id:

XM_008768761 ⟹ XP_008766983

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,312,449 - 70,343,139 (+)	NCBI
mRatBN7.2	11	56,806,418 - 56,837,239 (+)	NCBI
Rnor_6.0	11	61,748,822 - 61,779,631 (+)	NCBI

Sequence:

show sequence

TGATGATGCAGAACTTCCTGATTGGCTCTGCGGCGGAGGCGTTGGTTTAGTGGGCCAAGAGTTC
TGGGAGCCGGAACACGTGTTATCGCTTGCGAAGAGTTTAGGGGACCTGAAGGTACCGAGTTTTG
TAATCTACCGGTTTCTGGCAGCTCAGAGTCTCCTAGCGAGATTGCCGATCACTTCTCAGAAAAG
AAAGGACCTCCTTTCTCCTGGCCTCTGCTGGAGCGTAAGCTTCTCAGCTGCAAGTTTTTCTGAA
TTTAGCAGAACCCAGACGAATCCCTAATGATGAAGCTGAATCTCACCAAAGTTGTTAACGGCTG
TCGTCTAGGAAAAATACAAAACCTGGGCAAAGCAGGGGACTGCACAGTGGACATTCCAGGCTGT
CTGCTCTACACGAGGACTGGCTCTGCCCCACACCTGACACATCAGACACTGCATAATATCCATG
GGGTCCCAGCCATGGCCCAGCTCACACTGTCATCCCTAGCAGAACATCATGAAGTCTTGGCAGA
ATATAAGAAAGGAATTGGAAGCTTTATAGGCATGCCAGACTCGCTCTTCTACTGTTCCCTGCAC
GATCCAGTCAGCCCTGGCCCACCTGGTTACGTAACAAATAAGGTCCTTCAGAAAAGCGTGATCA
TTGGAGTGATTGAAGGTGGAGATGTGACGGAAGAGAGGTTGAGGTCGGCGCGAGAGACAGCCAA
GCGGCCCGTGGGGGGCTTCCTTCTGGACGGCTTCCAAGGGGGTCCAGCAGTCACAGAAACCAGG
CTGCACTTGCTGTCATCAGTCACTGCCGAGCTGCCGGAGGACAAACCAAGGCTCATCTGTGGTG
TCAGCCGGCCAGATGAAGTGCTCGAGTGTATTGAAAGGGGAGTGGACTTGTTTGAGAGTTTTTT
CCCATATCAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGCCAGCTGAATCCT
GAGGAGACATTACTGCAACAAAATGGAATCCAAGAAGAAATAAAATGTTTGGATCAAATAAAGA
AAATGGAAGCAACTGGGTGCAACCAAGAGATGACATCATTTGAAATCAATCTGAAGGAGAAAAA
GTACCAGGAAGACTTTCAGCCTCTCGTAAGAGGGTGCTCCTGTTACTGCTGTACGAACCACACT
CGTGCATACGTCCACCATCTGCTGGTGACCAACGAGCTGCTGGCCAGTGTCCTGCTGATGATGC
ACAACTTCGAGCACTACTTCCGGTTTTTCTGCTCCATCCGAGAGGCACTAAAGAGTGACACGCT
GGCACAGCTGAAAGAGCTCATCCGCAGACAGATGTCCTGAGAACTGGAAAGACAAACCTGTCCC
ATCTTTGGAAACAGTGAAGTGGCAGAGATCTGAGCTTTCAGCAGTTGTGGTGGGACTGAAGAGC
ATCTGCCCCACAGGAGTGCACCCACAGGAGTGTGGAGGAAGGCCTTCTGCAGCTTTCCTGGACC
AGATCGATCAGAACTGTGACTTTACATTTTTCTAGGTTTATTCTGCTAGTGGGTAAATTCCTTT
AGTTGAAGACAAAAATATTTGATATGAGAGAGACTTGAAAGGATTTGAGGTTCTAGAAACCACT
GAGGATGGATGAGACCTGAGTGAGGCCCTAGTAGAGATGACTGTCATAGCTGGAGGCACAGCTA
TTTCCTAGAGAAGTCTAGCTGATTCTACAGGTTTTTGTTTGTTTCTCCTCATGCTGTCAGGGGC
TTTGGGGCATACCTTTGTCTTCAGGGCTACCACAGCAGGACAGTCACTCAGAAGGGCTCTCCTG
CCTCAACCATGCTCATCTCTCCAAAGACTATGGGGCCCAAGTCATGCTTTCGTGATCTGTTAAC
TTCATTTGGCTACAAGGCTCTGTGAACTTGTCTTCTGAGAGCCGCTGTGCTTGCCTGTTAGGAA
CCAAATACTGCCTGGCTGCTCTGCCTGGTGCAGATCCAGCATGACCTGCCCAGGCTCATAGACT
GTGTGTCTAGCTCTGTCACTAGGGGGAGATTCCTTTGCTGTGTGTTTATGTGGCTAGAATCCTG
GCCTGACAGCAGATTCCATTCCACTCAGCCGTAAGCTCAGGCTAATCCTGCCTTTTCTACCTTT
CTGTGCCGGTTCCCTGATAGTAAACGGGGACAGGCATGGTAGGTGGAAGCAAAATGTTGACCAT
CTCCGTCATGCCTTTCACCCTTCTCTACTAGTCACTGCCGGCCTGACCCTTTCCCTCTCTCTCT
CCCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTGGTTTTTTGTTTGGTTTTTATGCAGCT
ATAGTTTGTCCTGTGGATCTTGAAGTGATTGGTGGGTGAATCAACCTTCTACAGACCTGAGGCT
GGTTGTCCCTCTTGGGTTCTCTGTAATTGTGTATTTTTGTTGGTGGCATGATAGGGCTTTTTTT
TTAATGTATCTTTCTATATTTATCAATTTTTCTAAGGAGTACATAAAACATACATGTACGTATA
TGTAGTTTTTATAAAAATAATGCATTTTAAAAGATTCATTTTTGTAGGTATAAGAAATGTGTTT
CTTATATTTTATTGGTTTTTAATTTATAGAGGACATTACTGAACATCGTGTACAGTAATTATGT
AGTAACTGCATTTTTATGTGTTGGAGATCCAACGTTGTTTGTCCTTTTTGTGGTATGACTTCTC
AATGAATGCAAGGGAGTCATAGAATGCAGACGTACAGATAGTTTCTGTTCTCAGTGATCCATGG
GAATGTGTTTTGTACTTGTTTATATGTTTTATTCTTGGTCAAGACCAAACCTATTATTGAAGGA
TTATTAGTAAATATCTAAAATCCCATATAAATTTATGAGTTTTATTTATGTCTAAAACACTGAA
AATTCTGTTAAACGTTGTTCAATTCCCTGGGTCTTTTTCTTATTAGCACATTTGAAAAGATTCT
TTCCTTTTATGTTGTAAATGTATGAAGGCTAACAAGCAATAAACATTTTTAATTAAAAAAACAA
A

hide sequence

RefSeq Acc Id:

XM_008768762 ⟹ XP_008766984

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,325,212 - 70,343,139 (+)	NCBI
mRatBN7.2	11	56,819,310 - 56,837,239 (+)	NCBI
Rnor_6.0	11	61,761,758 - 61,779,631 (+)	NCBI

Sequence:

show sequence

AGACACTGCATAATATCCATGGGGTCCCAGCCATGGCCCAGCTCACACTGTCATCCCTGTGAGT
GCTGAACCTAATCATTCAGAGCAGAACATCATGAAGTCTTGGCAGAATATAAGAAAGGAATTGG
AAGCTTTATAGGCATGCCAGACTCGCTCTTCTACTGTTCCCTGCACGATCCAGTCAGCCCTGGC
CCACCTGGTTACGTAACAAATAAGTCTGTGTCTGTGTGGGGTTTTGGAGGTCGAGTGGAAATGA
CCGTTTCCAAGTTCATGGCAATTCAGGAGGCCCTGCAGCCTGATTGGTTCCAATGCCTCTCAGA
TGGGGAGGCATCTTGTGCAGAGGCAACTTCCATCAAAAGGGCCAGGAAGTCTGTGGACCGGTCG
CTTCTGTTCCTGGACAGCTGTTTGCGACTGCAGGAGGACTCTGAGGTCCTTCAGAAAAGCGTGA
TCATTGGAGTGATTGAAGGTGGAGATGTGACGGAAGAGAGGTTGAGGTCGGCGCGAGAGACAGC
CAAGCGGCCCGTGGGGGGCTTCCTTCTGGACGGCTTCCAAGGGGGTCCAGCAGTCACAGAAACC
AGGCTGCACTTGCTGTCATCAGTCACTGCCGAGCTGCCGGAGGACAAACCAAGGCCAGTGCTGG
ATTGGGATGCAGGCCAGCCTCATGGGAGGCTCATCTGTGGTGTCAGCCGGCCAGATGAAGTGCT
CGAGTGTATTGAAAGGGGAGTGGACTTGTTTGAGAGTTTTTTCCCATATCAAGTGACCGAGCGG
GGCTGTGCCCTGACTTTCACCTTTGATTGCCAGCTGAATCCTGAGGAGACATTACTGCAACAAA
ATGGAATCCAAGAAGAAATAAAATGTTTGGATCAAATAAAGAAAATGGAAGCAACTGGGTGCAA
CCAAGAGATGACATCATTTGAAATCAATCTGAAGGAGAAAAAGTACCAGGAAGACTTTCAGCCT
CTCGTAAGAGGGTGCTCCTGTTACTGCTGTACGAACCACACTCGTGCATACGTCCACCATCTGC
TGGTGACCAACGAGCTGCTGGCCAGTGTCCTGCTGATGATGCACAACTTCGAGCACTACTTCCG
GTTTTTCTGCTCCATCCGAGAGGCACTAAAGAGTGACACGCTGGCACAGCTGAAAGAGCTCATC
CGCAGACAGATGTCCTGAGAACTGGAAAGACAAACCTGTCCCATCTTTGGAAACAGTGAAGTGG
CAGAGATCTGAGCTTTCAGCAGTTGTGGTGGGACTGAAGAGCATCTGCCCCACAGGAGTGCACC
CACAGGAGTGTGGAGGAAGGCCTTCTGCAGCTTTCCTGGACCAGATCGATCAGAACTGTGACTT
TACATTTTTCTAGGTTTATTCTGCTAGTGGGTAAATTCCTTTAGTTGAAGACAAAAATATTTGA
TATGAGAGAGACTTGAAAGGATTTGAGGTTCTAGAAACCACTGAGGATGGATGAGACCTGAGTG
AGGCCCTAGTAGAGATGACTGTCATAGCTGGAGGCACAGCTATTTCCTAGAGAAGTCTAGCTGA
TTCTACAGGTTTTTGTTTGTTTCTCCTCATGCTGTCAGGGGCTTTGGGGCATACCTTTGTCTTC
AGGGCTACCACAGCAGGACAGTCACTCAGAAGGGCTCTCCTGCCTCAACCATGCTCATCTCTCC
AAAGACTATGGGGCCCAAGTCATGCTTTCGTGATCTGTTAACTTCATTTGGCTACAAGGCTCTG
TGAACTTGTCTTCTGAGAGCCGCTGTGCTTGCCTGTTAGGAACCAAATACTGCCTGGCTGCTCT
GCCTGGTGCAGATCCAGCATGACCTGCCCAGGCTCATAGACTGTGTGTCTAGCTCTGTCACTAG
GGGGAGATTCCTTTGCTGTGTGTTTATGTGGCTAGAATCCTGGCCTGACAGCAGATTCCATTCC
ACTCAGCCGTAAGCTCAGGCTAATCCTGCCTTTTCTACCTTTCTGTGCCGGTTCCCTGATAGTA
AACGGGGACAGGCATGGTAGGTGGAAGCAAAATGTTGACCATCTCCGTCATGCCTTTCACCCTT
CTCTACTAGTCACTGCCGGCCTGACCCTTTCCCTCTCTCTCTCCCCTTCTTTTTTTTTTTTTTT
TTTTTTTTTTGGTTTGGTTTTTTGTTTGGTTTTTATGCAGCTATAGTTTGTCCTGTGGATCTTG
AAGTGATTGGTGGGTGAATCAACCTTCTACAGACCTGAGGCTGGTTGTCCCTCTTGGGTTCTCT
GTAATTGTGTATTTTTGTTGGTGGCATGATAGGGCTTTTTTTTTAATGTATCTTTCTATATTTA
TCAATTTTTCTAAGGAGTACATAAAACATACATGTACGTATATGTAGTTTTTATAAAAATAATG
CATTTTAAAAGATTCATTTTTGTAGGTATAAGAAATGTGTTTCTTATATTTTATTGGTTTTTAA
TTTATAGAGGACATTACTGAACATCGTGTACAGTAATTATGTAGTAACTGCATTTTTATGTGTT
GGAGATCCAACGTTGTTTGTCCTTTTTGTGGTATGACTTCTCAATGAATGCAAGGGAGTCATAG
AATGCAGACGTACAGATAGTTTCTGTTCTCAGTGATCCATGGGAATGTGTTTTGTACTTGTTTA
TATGTTTTATTCTTGGTCAAGACCAAACCTATTATTGAAGGATTATTAGTAAATATCTAAAATC
CCATATAAATTTATGAGTTTTATTTATGTCTAAAACACTGAAAATTCTGTTAAACGTTGTTCAA
TTCCCTGGGTCTTTTTCTTATTAGCACATTTGAAAAGATTCTTTCCTTTTATGTTGTAAATGTA
TGAAGGCTAACAAGCAATAAACATTTTTAATTAAAAAAACAAA

hide sequence

RefSeq Acc Id:

XM_039088231 ⟹ XP_038944159

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,312,352 - 70,343,139 (+)	NCBI
mRatBN7.2	11	56,806,469 - 56,837,239 (+)	NCBI

RefSeq Acc Id:

XM_039088233 ⟹ XP_038944161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,312,353 - 70,343,139 (+)	NCBI
mRatBN7.2	11	56,806,455 - 56,837,239 (+)	NCBI

RefSeq Acc Id:

XR_005491014

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,312,449 - 70,339,610 (+)	NCBI
mRatBN7.2	11	56,806,417 - 56,833,793 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001292082	(Get FASTA)	NCBI Sequence Viewer
	XP_006248382	(Get FASTA)	NCBI Sequence Viewer
	XP_008766981	(Get FASTA)	NCBI Sequence Viewer
	XP_008766982	(Get FASTA)	NCBI Sequence Viewer
	XP_008766983	(Get FASTA)	NCBI Sequence Viewer
	XP_008766984	(Get FASTA)	NCBI Sequence Viewer
	XP_038944159	(Get FASTA)	NCBI Sequence Viewer
	XP_038944161	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM11174	(Get FASTA)	NCBI Sequence Viewer
	EDM11176	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000072467
	ENSRNOP00000072467.2
	ENSRNOP00000076283
	ENSRNOP00000076283.1
	ENSRNOP00000076331
	ENSRNOP00000076331.2

RefSeq Acc Id:	XP_006248382 ⟸ XM_006248320
- Peptide Label:	isoform X2
- UniProtKB:	A0A1W2Q6P4 (UniProtKB/TrEMBL), A6IR22 (UniProtKB/TrEMBL), M0RB91 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMKLNLTKVVNGCRLGKIQNLGKAGDCTVDIPGCLLYTRTGSAPHLTHQTLHNIHGVPAMAQLT LSSLAEHHEVLAEYKKGIGSFIGMPDSLFYCSLHDPVSPGPPGYVTNKSVSVWGFGGRVEMTVS KFMAIQEALQPDWFQCLSDGEASCAEATSIKRARKSVDRSLLFLDSCLRLQEDSEVLQKSVIIG VIEGGDVTEERLRSARETAKRPVGGFLLDGFQGGPAVTETRLHLLSSVTAELPEDKPRLICGVS RPDEVLECIERGVDLFESFFPYQVTERGCALTFTFDCQLNPEETLLQQNGIQEEIKCLDQIKKM EATGCNQEMTSFEINLKEKKYQEDFQPLVRGCSCYCCTNHTRAYVHHLLVTNELLASVLLMMHN FEHYFRFFCSIREALKSDTLAQLKELIRRQMS hide sequence

RefSeq Acc Id:	XP_008766981 ⟸ XM_008768759
- Peptide Label:	isoform X1
- UniProtKB:	M0RB91 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMKLNLTKVVNGCRLGKIQNLGKAGDCTVDIPGCLLYTRTGSAPHLTHQTLHNIHGVPAMAQLT LSSLAEHHEVLAEYKKGIGSFIGMPDSLFYCSLHDPVSPGPPGYVTNKSVSVWGFGGRVEMTVS KFMAIQEALQPDWFQCLSDGEASCAEATSIKRARKSVDRSLLFLDSCLRLQEDSEVLQKSVIIG VIEGGDVTEERLRSARETAKRPVGGFLLDGFQGGPAVTETRLHLLSSVTAELPEDKPRPVLDWD AGQPHGRLICGVSRPDEVLECIERGVDLFESFFPYQVTERGCALTFTFDCQLNPEETLLQQNGI QEEIKCLDQIKKMEATGCNQEMTSFEINLKEKKYQEDFQPLVRGCSCYCCTNHTRAYVHHLLVT NELLASVLLMMHNFEHYFRFFCSIREALKSDTLAQLKELIRRQMS hide sequence

RefSeq Acc Id:

XP_008766982 ⟸ XM_008768760

- Peptide Label:

isoform X3

- Sequence:

show sequence

MMKLNLTKVVNGCRLGKIQNLGKAGDCTVDIPGCLLYTRTGSAPHLTHQTLHNIHGVPAMAQLT
LSSLAEHHEVLAEYKKGIGSFIGMPDSLFYCSLHDPVSPGPPGYVTNKVLQKSVIIGVIEGGDV
TEERLRSARETAKRPVGGFLLDGFQGGPAVTETRLHLLSSVTAELPEDKPRPVLDWDAGQPHGR
LICGVSRPDEVLECIERGVDLFESFFPYQVTERGCALTFTFDCQLNPEETLLQQNGIQEEIKCL
DQIKKMEATGCNQEMTSFEINLKEKKYQEDFQPLVRGCSCYCCTNHTRAYVHHLLVTNELLASV
LLMMHNFEHYFRFFCSIREALKSDTLAQLKELIRRQMS

hide sequence

RefSeq Acc Id:	XP_008766983 ⟸ XM_008768761
- Peptide Label:	isoform X4
- UniProtKB:	D3ZBQ4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMKLNLTKVVNGCRLGKIQNLGKAGDCTVDIPGCLLYTRTGSAPHLTHQTLHNIHGVPAMAQLT LSSLAEHHEVLAEYKKGIGSFIGMPDSLFYCSLHDPVSPGPPGYVTNKVLQKSVIIGVIEGGDV TEERLRSARETAKRPVGGFLLDGFQGGPAVTETRLHLLSSVTAELPEDKPRLICGVSRPDEVLE CIERGVDLFESFFPYQVTERGCALTFTFDCQLNPEETLLQQNGIQEEIKCLDQIKKMEATGCNQ EMTSFEINLKEKKYQEDFQPLVRGCSCYCCTNHTRAYVHHLLVTNELLASVLLMMHNFEHYFRF FCSIREALKSDTLAQLKELIRRQMS hide sequence

RefSeq Acc Id:

XP_008766984 ⟸ XM_008768762

- Peptide Label:

isoform X5

- Sequence:

show sequence

MPDSLFYCSLHDPVSPGPPGYVTNKSVSVWGFGGRVEMTVSKFMAIQEALQPDWFQCLSDGEAS
CAEATSIKRARKSVDRSLLFLDSCLRLQEDSEVLQKSVIIGVIEGGDVTEERLRSARETAKRPV
GGFLLDGFQGGPAVTETRLHLLSSVTAELPEDKPRPVLDWDAGQPHGRLICGVSRPDEVLECIE
RGVDLFESFFPYQVTERGCALTFTFDCQLNPEETLLQQNGIQEEIKCLDQIKKMEATGCNQEMT
SFEINLKEKKYQEDFQPLVRGCSCYCCTNHTRAYVHHLLVTNELLASVLLMMHNFEHYFRFFCS
IREALKSDTLAQLKELIRRQMS

hide sequence

RefSeq Acc Id:

NP_001292082 ⟸ NM_001305153

- UniProtKB:

A0A1W2Q6P4 (UniProtKB/TrEMBL), A6IR22 (UniProtKB/TrEMBL), M0RB91 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MMKLNLTKVVNGCRLGKIQNLGKAGDCTVDIPGCLLYTRTGSAPHLTHQTLHNIHGVPAMAQLT
LSSLAEHHEVLAEYKKGIGSFIGMPDSLFYCSLHDPVSPGPPGYVTNKSVSVWGFGGRVEMTVS
KFMAIQEALQPDWFQCLSDGEASCAEATSIKRARKSVDRSLLFLDSCLRLQEDSEVLQKSVIIG
VIEGGDVTEERLRSARETAKRPVGGFLLDGFQGGPAVTETRLHLLSSVTAELPEDKPRLICGVS
RPDEVLECIERGVDLFESFFPYQVTERGCALTFTFDCQLNPEETLLQQNGIQEEIKCLDQIKKM
EATGCNQEMTSFEINLKEKKYQEDFQPLVRGCSCYCCTNHTRAYVHHLLVTNELLASVLLMMHN
FEHYFRFFCSIREALKSDTLAQLKELIRRQMS

hide sequence

RefSeq Acc Id:

ENSRNOP00000070976 ⟸ ENSRNOT00000089340

RefSeq Acc Id:

ENSRNOP00000076283 ⟸ ENSRNOT00000093552

RefSeq Acc Id:

ENSRNOP00000076331 ⟸ ENSRNOT00000093719

RefSeq Acc Id:

ENSRNOP00000072467 ⟸ ENSRNOT00000091598

RefSeq Acc Id:	XP_038944161 ⟸ XM_039088233
- Peptide Label:	isoform X2
- UniProtKB:	A0A1W2Q6P4 (UniProtKB/TrEMBL), A6IR22 (UniProtKB/TrEMBL), M0RB91 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944159 ⟸ XM_039088231
- Peptide Label:	isoform X1
- UniProtKB:	M0RB91 (UniProtKB/TrEMBL)

Protein Domains

tRNA-guanine(15) transglycosylase-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0RB91-F1-model_v2	AlphaFold	M0RB91	1-415	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698157

Promoter ID:

EPDNEW_R8680

Type:

initiation region

Name:

Qtrt2_1

Description:

queuine tRNA-ribosyltransferase accessory subunit 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	11	61,748,909 - 61,748,969	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310054	AgrOrtholog
BioCyc Gene	G2FUF-21333	BioCyc
BioCyc Pathway	PWY-8105 [queuosine biosynthesis II (queuine salvage)]	BioCyc
BioCyc Pathway Image	PWY-8105	BioCyc
Ensembl Genes	ENSRNOG00000060729	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000091598	ENTREZGENE
	ENSRNOT00000091598.2	UniProtKB/TrEMBL
	ENSRNOT00000093552.2	UniProtKB/TrEMBL
	ENSRNOT00000093719.2	UniProtKB/TrEMBL
Gene3D-CATH	3.20.20.105	UniProtKB/TrEMBL
InterPro	QTRTD1	UniProtKB/TrEMBL
	TGT-like_sf	UniProtKB/TrEMBL
	tRNA_ribo_trans	UniProtKB/TrEMBL
KEGG Report	rno:288364	UniProtKB/TrEMBL
NCBI Gene	288364	ENTREZGENE
PANTHER	QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2	UniProtKB/TrEMBL
	QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2	UniProtKB/TrEMBL
Pfam	TGT	UniProtKB/TrEMBL
PhenoGen	Qtrt2	PhenoGen
RatGTEx	ENSRNOG00000060729	RatGTEx
Superfamily-SCOP	tRNA_ribo_trans	UniProtKB/TrEMBL
UniProt	A0A1W2Q6P4	ENTREZGENE, UniProtKB/TrEMBL
	A6IR22	ENTREZGENE, UniProtKB/TrEMBL
	D3ZBQ4	ENTREZGENE, UniProtKB/TrEMBL
	M0RB91	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-01	Qtrt2	queuine tRNA-ribosyltransferase accessory subunit 2	Qtrtd1	queuine tRNA-ribosyltransferase domain containing 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Qtrtd1	queuine tRNA-ribosyltransferase domain containing 1	Qtrtd1_predicted	queuine tRNA-ribosyltransferase domain containing 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Qtrtd1_predicted	queuine tRNA-ribosyltransferase domain containing 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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