Gene: Sptlc3 (serine palmitoyltransferase, long chain base subunit 3) Rattus norvegicus
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Symbol: Sptlc3
Name: serine palmitoyltransferase, long chain base subunit 3
Description: ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN sphingoid biosynthetic process (ortholog); PARTICIPATES IN sphingolipid metabolic pathway; ASSOCIATED WITH Peripheral Nervous System Diseases (ortholog); FOUND IN serine C-palmitoyltransferase complex (ortholog); INTERACTS WITH bisphenol A; testosterone; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296188; RGD1310030; serine palmitoyltransferase 3; similar to dJ718P11.1.1 (novel class II aminotransferase similar to serine palmotyltransferase (isoform 1)); similar to RIKEN cDNA C130053K05 gene
Orthologs:
Allele / Splice: Sptlc3Tn(sb-T2/Bart3)2.147Mcwi  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03132,560,437 - 132,689,313 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.03139,023,075 - 139,151,792 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.43127,691,668 - 127,825,206 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13127,597,526 - 127,729,920 (+)NCBI
Celera3125,501,233 - 125,630,510 (+)NCBI
Cytogenetic Map3q36NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sptlc3
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1310030
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2016-09-13
Status: ACTIVE