Gene: Sptlc3 (serine palmitoyltransferase, long chain base subunit 3) Rattus norvegicus
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Symbol: Sptlc3
Name: serine palmitoyltransferase, long chain base subunit 3
Description: ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN sphingoid biosynthetic process (ortholog); PARTICIPATES IN sphingolipid metabolic pathway; ASSOCIATED WITH Peripheral Nervous System Diseases (ortholog); FOUND IN serine C-palmitoyltransferase complex (ortholog); INTERACTS WITH bisphenol A; testosterone; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296188; RGD1310030; serine palmitoyltransferase 3; similar to dJ718P11.1.1 (novel class II aminotransferase similar to serine palmotyltransferase (isoform 1)); similar to RIKEN cDNA C130053K05 gene
Orthologs:
Allele / Splice: Sptlc3Tn(sb-T2/Bart3)2.147Mcwi  
Genetic Models: F344-Sptlc3Tn(sb-T2/Bart3)2.147Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03132,560,437 - 132,689,313 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.03139,023,075 - 139,151,792 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.43127,691,668 - 127,825,206 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13127,597,526 - 127,729,920 (+)NCBI
Celera3125,501,233 - 125,630,510 (+)NCBI
Cytogenetic Map3q36NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sptlc3
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1310030
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2016-11-18
Status: ACTIVE