Spats2l (spermatogenesis associated, serine-rich 2-like)

Gene: Spats2l (spermatogenesis associated, serine-rich 2-like) Rattus norvegicus

Analyze

Symbol:

Spats2l

Name:

spermatogenesis associated, serine-rich 2-like

RGD ID:

1309930

Description:

Predicted to be located in cytosol; nucleolus; and nucleoplasm. Predicted to be part of protein-containing complex. Predicted to be active in cytoplasm. Orthologous to human SPATS2L (spermatogenesis associated serine rich 2 like); INTERACTS WITH 1,2-dimethylhydrazine; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC316426; RGD1309930; similar to 2810022L02Rik protein; SPATS2-like protein

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	66,814,217 - 66,988,084 (+)	NCBI		GRCr8
mRatBN7.2	9	59,319,949 - 59,493,864 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	59,320,276 - 59,493,967 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	67,895,228 - 67,993,937 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	73,011,133 - 73,109,850 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	71,329,242 - 71,427,953 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	64,643,223 - 64,843,963 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	64,643,281 - 64,843,960 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	64,442,918 - 64,641,803 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	56,584,578 - 56,607,773 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	56,841,343 - 56,939,933 (+)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atrial fibrillation (ISO)

COVID-19 (ISO)

genetic disease (ISO)

Neurodevelopmental Disorders (ISO)

Primary Pulmonary Hypertension, 1 (ISO)

Pulmonary Arterial Hypertension (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (EXP,ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

cobalt dichloride (EXP,ISO)

cocaine (EXP)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

dibutyl phthalate (EXP,ISO)

dioxygen (EXP)

diquat (ISO)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

ethyl methanesulfonate (ISO)

folic acid (ISO)

formaldehyde (ISO)

gallic acid (ISO)

genistein (EXP)

gentamycin (EXP)

isobutanol (ISO)

ivermectin (ISO)

lead(0) (ISO)

leflunomide (ISO)

methotrexate (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

ochratoxin A (EXP,ISO)

oxaliplatin (EXP)

paracetamol (EXP,ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium dichromate (ISO)

progesterone (ISO)

Salinomycin (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sodium dichromate (ISO)

Soman (EXP)

sotorasib (ISO)

sunitinib (ISO)

theophylline (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

toluene (EXP)

topotecan (EXP)

trametinib (ISO)

trimellitic anhydride (ISO)

valproic acid (ISO)

vinclozolin (EXP)

XL147 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytoplasm (IBA,IEA)

cytosol (IEA,ISO)

nucleolus (IEA,ISO)

nucleoplasm (IEA,ISO)

protein-containing complex (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:22658674	PMID:22681889	PMID:30361391

Genomics

Comparative Map Data

Spats2l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	66,814,217 - 66,988,084 (+)	NCBI		GRCr8
mRatBN7.2	9	59,319,949 - 59,493,864 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	59,320,276 - 59,493,967 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	67,895,228 - 67,993,937 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	73,011,133 - 73,109,850 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	71,329,242 - 71,427,953 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	64,643,223 - 64,843,963 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	64,643,281 - 64,843,960 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	64,442,918 - 64,641,803 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	56,584,578 - 56,607,773 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	56,841,343 - 56,939,933 (+)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

SPATS2L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	200,305,879 - 200,482,264 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	200,305,881 - 200,482,264 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	201,170,602 - 201,346,987 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	200,878,849 - 201,055,231 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	194,925,314 - 195,101,826 (+)	NCBI		Celera
Cytogenetic Map	2	q33.1	NCBI
HuRef	2	193,023,113 - 193,199,377 (+)	NCBI		HuRef
CHM1_1	2	201,176,660 - 201,352,970 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	200,789,476 - 200,965,756 (+)	NCBI		T2T-CHM13v2.0

Spats2l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	57,813,261 - 57,987,557 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	57,813,321 - 57,987,553 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	57,774,102 - 57,948,398 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	57,774,162 - 57,948,394 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	57,831,705 - 58,005,241 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	57,719,474 - 57,892,940 (+)	NCBI		MGSCv36	mm8
Celera	1	58,288,869 - 58,462,213 (+)	NCBI		Celera
Cytogenetic Map	1	C1.3	NCBI
cM Map	1	28.85	NCBI

Spats2l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	930,622 - 1,013,777 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	930,622 - 1,085,906 (-)	NCBI	ChiLan1.0	ChiLan1.0

SPATS2L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	102,927,981 - 103,101,292 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	102,943,003 - 103,116,292 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	87,558,298 - 87,735,646 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	205,717,033 - 205,889,626 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	205,800,294 - 205,889,626 (+)	Ensembl	panpan1.1		panPan2

SPATS2L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	9,403,557 - 9,564,466 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	9,407,101 - 9,586,913 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	10,290,333 - 10,451,092 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	9,302,927 - 9,463,742 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	9,302,462 - 9,463,742 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	9,291,451 - 9,451,900 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	9,263,345 - 9,424,308 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	9,261,759 - 9,422,544 (+)	NCBI		UU_Cfam_GSD_1.0

Spats2l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	157,436,486 - 157,603,590 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936825	423,984 - 591,495 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936825	423,986 - 591,062 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPATS2L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	103,879,356 - 104,060,524 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	103,879,416 - 104,060,525 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	115,151,331 - 115,332,519 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SPATS2L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	85,804,609 - 85,975,998 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	85,807,818 - 85,976,099 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	113,463,647 - 113,635,234 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Spats2l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624889	596,024 - 716,310 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624889	596,019 - 737,072 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Spats2l
974 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	192
Count of miRNA genes:	116
Interacting mature miRNAs:	133
Transcripts:	ENSRNOT00000021527
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
1331757	Cdexp1	CD45RC expression in CD8 T cells QTL 1	4.3		CD8-positive T cell quantity (VT:0008077)	blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)	9	1024537	67509080	Rat
631680	Cm11	Cardiac mass QTL 11	3.1	0.00089	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	9	20430519	65430519	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	22071169	86369743	Rat
631643	Bp120	Blood pressure QTL 120	3	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	22071200	67071200	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	23754024	61381613	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	23754144	83851531	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	25268044	79271759	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	25661188	100929786	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	27468639	72468639	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	32535505	77535505	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	32535505	77535505	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	36962359	77814038	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	36962359	92058970	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	36962359	95410867	Rat
6903941	Pur31	Proteinuria QTL 31		0.036	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	9	40194188	85194188	Rat
11353949	Bp393	Blood pressure QTL 393			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	40194188	85194188	Rat
61352	Bp34	Blood pressure QTL 34	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	42495343	79271511	Rat
10058949	Gmadr5	Adrenal mass QTL 5	2	0.014	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	9	42791513	87976209	Rat
11353951	Bp394	Blood pressure QTL 394			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	44649921	89649921	Rat
12879506	Pur33	Proteinuria QTL 33			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	44649921	89649921	Rat
11353957	Bmd92	Bone mineral density QTL 92		0.01	tibia mineral mass (VT:1000283)	volumetric bone mineral density (CMO:0001553)	9	46114199	91114199	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	48598251	93598251	Rat
1598849	Memor17	Memory QTL 17	2.2		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	49968546	71098346	Rat
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	55847841	77026453	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	56627713	78595166	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	9	56627713	78595166	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	56627713	78595166	Rat
1578760	Cm53	Cardiac mass QTL 53	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	56771635	101771635	Rat
724515	Uae16	Urinary albumin excretion QTL 16	8		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	58163035	100929646	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	2	33	10	10		10	2	2	62	24	31	3	2
Low	1	10	47	31	19	31	6	9	12	11	8	8	6
Below cutoff											2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596460	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC085874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000021527 ⟹ ENSRNOP00000021527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	59,320,276 - 59,493,967 (+)	Ensembl
Rnor_6.0 Ensembl	9	64,745,051 - 64,843,960 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000081497 ⟹ ENSRNOP00000069610

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	59,426,375 - 59,493,863 (+)	Ensembl
Rnor_6.0 Ensembl	9	64,643,281 - 64,843,928 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000100381 ⟹ ENSRNOP00000077000

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	59,320,276 - 59,493,967 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000103936 ⟹ ENSRNOP00000077858

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	59,320,276 - 59,493,863 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000104709 ⟹ ENSRNOP00000081101

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	59,322,674 - 59,493,861 (+)	Ensembl

RefSeq Acc Id:

NM_001014102 ⟹ NP_001014124

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,889,148 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,394,928 - 59,493,864 (+)	NCBI
Rnor_6.0	9	64,745,051 - 64,843,961 (+)	NCBI
Rnor_5.0	9	64,442,918 - 64,641,803 (+)	NCBI
RGSC_v3.4	9	56,584,578 - 56,607,773 (+)	RGD
Celera	9	56,841,343 - 56,939,933 (+)	RGD

Sequence:

show sequence

CATCCCTTTCAGTAGAGGAGGCCCTCTCAGGTCTGCGTGTCTGAGGCCACTAGTCCAGTGCTGA
TTATTCAGACACACCCAAGATCCTACCACTACTCCAGTTCCTGGCTCCACCTCGTCAGTACTGC
GGTGACTTACTGGTCACAGTCAACAAAAGTTGATAAAGGTGGCCCTTGGGAGATTGGAATTGAC
TGTTGGGCTGCTGAGGAGGAAGCAAGTAGCTGGAACAGTCTATGCCTGACAGCCCGAAGCGGAA
CACCAAGAGACCTTGAGAGGCTTATACCCCTAGAAGGAAGATGGCTGAACTCAACACTCATGTG
AATGTCAAAGAGAAGATCTACGCAGTTAGATCAGTTGTTCCGAACAAAAGCAATAATGAAATTG
TCCTGGTGCTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTGCAAGCCTTTGTGGACGGCAG
TGCTATTCAGGTTCTTAAAGAATGGAGCATGACGGGGAAAAAGAAGAATAACAAAAGAAAAAGA
AGCAAATCCAAGCAGCATCAAGGCAACAAAGATGCTAAGGACAAGGGGGAGAGGCCGGAGGTGG
GGCCCCTGCAGCCCCAGGCACCACTGGTACAAAATGGTCACATGAATGGCTGTGAAAAGGACAG
CTCATCCCCTGACTCTGCCAGAGAAAAACTGGCCCTCACACCACGTGAGAAAAAGATCTCAATA
CTGGAGGAACCACCAAGGGCTCAGCGTGGGATCACAGAAGGCAGCAGACTACTGCAGCAGAAAA
TGTCCTTAGATGGGAACCCCAAAGCTATTCATGGACCATCAGAGAGGTCAGATGGCCTACAGTG
GTCAGCTGGGCAGCCTTGTAACCCAAGCAAGCCTAAGGCAAAAACATCTCCTGTTAAGTCCAAT
GCCCCTGCAGCTCATCTTGAAATAAAGCCAGATGAGCTGGCAAAGAAAAGAGGTCCAAATATTG
AGAAATCGGTGAAGGATCTGCAGCGCTGCACTGTTTCTCTGACGAGATACCGAGTCATGATCAA
GGAAGAGGTGGACAGTTCTGTGAAGAAGATCAAAGCAGCTTTTGCTGAGCTACACAACTGCATC
ATTGACAAAGAAGTTTCACTGATGGCAGAGATGGATAAAGTTAAAGAAGAAGCCATGGACATCC
TGACTGCCCGTCAGAAGAAGGCAGAGGAGCTGAAGCGACTGACTGATCTAGCCAGTCAAATGGC
AGAGATGCAGCTGGCCGAACTCAGAGCTGAAATTAAGCACTTTGTCAGCGAACGCAAATATGAT
GAAGAGCTAGGGAAAGCCGCCCGCTTCTCCTGCGACATTGAACAGCTGAAAGCCCAAATCCTGA
TCTGCGGAGAAATCACACATCCAAAGAACAACTATTCCTCAAGAACTCCCTGCAGCTCCCTGTT
GCCTCTGCTGAACACTCATGCGGTAGCTTCCGGGAAGCAGGGGAATTTTTCCCGGAAGTCATCC
GGTCACAACAAGCCCAATGAGGGGAAAGCAGCGAACCCCAAAATGGTGAGCGGTCTTCCCAGCA
CTGCCGATGCATGTCAGCAGACCATGCCTACTAACAAGCAGCAGAATGGACCTTCCAACCAAAG
ACGAAGATTTAATCCACAGTATCACAACAGGCTAAATGGTCCAGCCAAGTCACAGGGCAGTGGT
AATGAAGCTGATCCCATGGTGAAGAGCAACAACCGACATGAACACAGAAGACAGCCACATAATG
GTTTTCGTCCCAAAAACAAAGGTGGTGCCAAAAACCAAGAGGCCCCCTTGGGGACAAAGGCCCC
AGAGGCCCCACCACATTCTGAAAAGGCCCGTCGAAGGCAGCACGCTGCAGACAACTTAGAGACC
AGGCCTTTCCGGGGTAATGTTGGTAGGGTTTCACAGTGCAATCTTTGTCCCACTAGAATAGAAG
TTTCCACAGAGGCCACGGTTCTCTCAGTCCCAGCTGTGACGCTGGTGGCCTGAGCTGGGAAGGA
AGAGAGCAGGTTTTGCCTGGTTTTGGTTCCCTGCCCAAGGTGCTGACCCAATTCGCTGCCAAAA
GAGAGTCAATCAGAATATACAAACCTGTATGTTTGTGTCGTTCTCTCGCAATCATTTTTACTAA
TCCTAGTACTCTGCTCTAGCTTGCTTCATAACTCCCATGGCTTTGCTTGATCTGTTGTCGCTTC
TCCTCATCAAGACTTTGCATCATGTTAGCCAGCCAGTATTTACCCATTGTTAGGAAAATCGAGA
TGTGGCTGAAGATCAGAGGCTCAGTTAGCAACCTACGTTGTAGCTGTGATGTCGACCCATTGGT
TGTCTTTAGAGAGTTAATGTTGAAACAAGAAATTCTTGATCAGACAAACGTGATCTGCTGAAGA
CACATGTGCTTTTGTAGAATTTAACATCTGGTGTTTTTCTGAAATATTATATAAATATATATAT
AAACATATATTGCTTTATTTGAAACAAATTAAAATATGCTGCATTTGAAAAAAAAAAAAAAAAA
AAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006244990 ⟹ XP_006245052

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,235 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,319,949 - 59,493,864 (+)	NCBI
Rnor_6.0	9	64,643,246 - 64,843,963 (+)	NCBI
Rnor_5.0	9	64,442,918 - 64,641,803 (+)	NCBI

Sequence:

show sequence

ATCATGAATAATGCTTGCCTTTCCTCTCCCGACTACTGCACTCCCAGGCAGAAACACCACTGGC
GGATGCCACGGGAGGCTCGGGGCAGCTCGGAGACTCCAGAAGCCAGGCTGCTTTCGGGAACAAC
TCTGTGGATTCCCAGGGCTTATACCCCTAGAAGGAAGATGGCTGAACTCAACACTCATGTGAAT
GTCAAAGAGAAGATCTACGCAGTTAGATCAGTTGTTCCGAACAAAAGCAATAATGAAATTGTCC
TGGTGCTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTGCAAGCCTTTGTGGACGGCAGTGC
TATTCAGGTTCTTAAAGAATGGAGCATGACGGGGAAAAAGAAGAATAACAAAAGAAAAAGAAGC
AAATCCAAGCAGCATCAAGGCAACAAAGATGCTAAGGACAAGGGGGAGAGGCCGGAGGTGGGGC
CCCTGCAGCCCCAGGCACCACTGGTACAAAATGGTCACATGAATGGCTGTGAAAAGGACAGCTC
ATCCCCTGACTCTGCCAGAGAAAAACTGGCCCTCACACCACGTGAGAAAAAGATCTCAATACTG
GAGGAACCACCAAGGGCTCAGCGTGGGATCACAGAAGGCAGCAGACTACTGCAGCAGAAAATGT
CCTTAGATGGGAACCCCAAAGCTATTCATGGACCATCAGAGAGGTCAGATGGCCTACAGTGGTC
AGCTGGGCAGCCTTGTAACCCAAGCAAGCCTAAGGCAAAAACATCTCCTGTTAAGTCCAATGCC
CCTGCAGCTCATCTTGAAATAAAGCCAGATGAGCTGGCAAAGAAAAGAGGTCCAAATATTGAGA
AATCGGTGAAGGATCTGCAGCGCTGCACTGTTTCTCTGACGAGATACCGAGTCATGATCAAGGA
AGAGGTGGACAGTTCTGTGAAGAAGATCAAAGCAGCTTTTGCTGAGCTACACAACTGCATCATT
GACAAAGAAGTTTCACTGATGGCAGAGATGGATAAAGTTAAAGAAGAAGCCATGGACATCCTGA
CTGCCCGTCAGAAGAAGGCAGAGGAGCTGAAGCGACTGACTGATCTAGCCAGTCAAATGGCAGA
GATGCAGCTGGCCGAACTCAGAGCTGAAATTAAGCACTTTGTCAGCGAACGCAAATATGATGAA
GAGCTAGGGAAAGCCGCCCGCTTCTCCTGCGACATTGAACAGCTGAAAGCCCAAATCCTGATCT
GCGGAGAAATCACACATCCAAAGAACAACTATTCCTCAAGAACTCCCTGCAGCTCCCTGTTGCC
TCTGCTGAACACTCATGCGGTAGCTTCCGGGAAGCAGGGGAATTTTTCCCGGAAGTCATCCGGT
CACAACAAGCCCAATGAGGGGAAAGCAGCGAACCCCAAAATGGTGAGCGGTCTTCCCAGCACTG
CCGATGCATGTCAGCAGACCATGCCTACTAACAAGCAGCAGAATGGACCTTCCAACCAAAGACG
AAGATTTAATCCACAGTATCACAACAGGCTAAATGGTCCAGCCAAGTCACAGGGCAGTGGTAAT
GAAGCTGATCCCATGGTGAAGAGCAACAACCGACATGAACACAGAAGACAGCCACATAATGGTT
TTCGTCCCAAAAACAAAGGTGGTGCCAAAAACCAAGAGGCCCCCTTGGGGACAAAGGCCCCAGA
GGCCCCACCACATTCTGAAAAGGCCCGTCGAAGGCAGCACGCTGCAGACAACTTAGAGACCAGG
CCTTTCCGGGGTAATGTTGGTAGGGTTTCACAGTGCAATCTTTGTCCCACTAGAATAGAAGTTT
CCACAGAGGCCACGGTTCTCTCAGTCCCAGCTGTGACGCTGGTGGCCTGAGCTGGGAAGGAAGA
GAGCAGGTTTTGCCTGGTTTTGGTTCCCTGCCCAAGGTGCTGACCCAATTCGCTGCCAAAAGAG
AGTCAATCAGAATATACAAACCTGTATGTTTGTGTCGTTCTCTCGCAATCATTTTTACTAATCC
TAGTACTCTGCTCTAGCTTGCTTCATAACTCCCATGGCTTTGCTTGATCTGTTGTCGCTTCTCC
TCATCAAGACTTTGCATCATGTTAGCCAGCCAGTATTTACCCATTGTTAGGAAAATCGAGATGT
GGCTGAAGATCAGAGGCTCAGTTAGCAACCTACGTTGTAGCTGTGATGTCGACCCATTGGTTGT
CTTTAGAGAGTTAATGTTGAAACAAGAAATTCTTGATCAGACAAACGTGATCTGCTGAAGACAC
ATGTGCTTTTGTAGAATTTAACATCTGGTGTTTTTCTGAAATATTATATAAATATATATATAAA
CATATATTGCTTTATTTGAAACAAATTAAAATATGCTGCATTTGACA

hide sequence

RefSeq Acc Id:

XM_006244992 ⟹ XP_006245054

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,217 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,319,956 - 59,493,864 (+)	NCBI
Rnor_6.0	9	64,643,223 - 64,843,963 (+)	NCBI
Rnor_5.0	9	64,442,918 - 64,641,803 (+)	NCBI

Sequence:

show sequence

GGTGTGCGATCTAAAGTGCGTCCATCATGAATAATGCTTGCCTTTCCTCTCCCGACTACTGCAC
TCCCAGGCAGAAACACCACTGGCGGATGCCACGGGAGGCTCGGGGCAGCTCGGAGACTCCAGAA
GCCAGGCTGCTTTCGGGAACAACTCTGTGGATTCCCAGGTCCTGTGGTCAGAGCTGAAGGCCCC
GGTTAGTCCCGCTGCAAGTACATGGCTGGAACACAGGAAACCGGAGCTTCAACGAGCAAGGCTT
ATACCCCTAGAAGGAAGATGGCTGAACTCAACACTCATGTGAATGTCAAAGAGAAGATCTACGC
AGTTAGATCAGTTGTTCCGAACAAAAGCAATAATGAAATTGTCCTGGTGCTCCAACAGTTTGAT
TTTAATGTGGATAAAGCCGTGCAAGCCTTTGTGGACGGCAGTGCTATTCAGGTTCTTAAAGAAT
GGAGCATGACGGGGAAAAAGAAGAATAACAAAAGAAAAAGAAGCAAATCCAAGCAGCATCAAGG
CAACAAAGATGCTAAGGACAAGGGGGAGAGGCCGGAGGTGGGGCCCCTGCAGCCCCAGGCACCA
CTGGTACAAAATGGTCACATGAATGGCTGTGAAAAGGACAGCTCATCCCCTGACTCTGCCAGAG
AAAAACTGGCCCTCACACCACGTGAGAAAAAGATCTCAATACTGGAGGAACCACCAAGGGCTCA
GCGTGGGATCACAGAAGGCAGCAGACTACTGCAGCAGAAAATGTCCTTAGATGGGAACCCCAAA
GCTATTCATGGACCATCAGAGAGGTCAGATGGCCTACAGTGGTCAGCTGGGCAGCCTTGTAACC
CAAGCAAGCCTAAGGCAAAAACATCTCCTGTTAAGTCCAATGCCCCTGCAGCTCATCTTGAAAT
AAAGCCAGATGAGCTGGCAAAGAAAAGAGGTCCAAATATTGAGAAATCGGTGAAGGATCTGCAG
CGCTGCACTGTTTCTCTGACGAGATACCGAGTCATGATCAAGGAAGAGGTGGACAGTTCTGTGA
AGAAGATCAAAGCAGCTTTTGCTGAGCTACACAACTGCATCATTGACAAAGAAGTTTCACTGAT
GGCAGAGATGGATAAAGTTAAAGAAGAAGCCATGGACATCCTGACTGCCCGTCAGAAGAAGGCA
GAGGAGCTGAAGCGACTGACTGATCTAGCCAGTCAAATGGCAGAGATGCAGCTGGCCGAACTCA
GAGCTGAAATTAAGCACTTTGTCAGCGAACGCAAATATGATGAAGAGCTAGGGAAAGCCGCCCG
CTTCTCCTGCGACATTGAACAGCTGAAAGCCCAAATCCTGATCTGCGGAGAAATCACACATCCA
AAGAACAACTATTCCTCAAGAACTCCCTGCAGCTCCCTGTTGCCTCTGCTGAACACTCATGCGG
TAGCTTCCGGGAAGCAGGGGAATTTTTCCCGGAAGTCATCCGGTCACAACAAGCCCAATGAGGG
GAAAGCAGCGAACCCCAAAATGGTGAGCGGTCTTCCCAGCACTGCCGATGCATGTCAGCAGACC
ATGCCTACTAACAAGCAGCAGAATGGACCTTCCAACCAAAGACGAAGATTTAATCCACAGTATC
ACAACAGGCTAAATGGTCCAGCCAAGTCACAGGGCAGTGGTAATGAAGCTGATCCCATGGTGAA
GAGCAACAACCGACATGAACACAGAAGACAGCCACATAATGGTTTTCGTCCCAAAAACAAAGGT
GGTGCCAAAAACCAAGAGGCCCCCTTGGGGACAAAGGCCCCAGAGGCCCCACCACATTCTGAAA
AGGCCCGTCGAAGGCAGCACGCTGCAGACAACTTAGAGACCAGGCCTTTCCGGGGTAATGTTGG
TAGGGTTTCACAGTGCAATCTTTGTCCCACTAGAATAGAAGTTTCCACAGAGGCCACGGTTCTC
TCAGTCCCAGCTGTGACGCTGGTGGCCTGAGCTGGGAAGGAAGAGAGCAGGTTTTGCCTGGTTT
TGGTTCCCTGCCCAAGGTGCTGACCCAATTCGCTGCCAAAAGAGAGTCAATCAGAATATACAAA
CCTGTATGTTTGTGTCGTTCTCTCGCAATCATTTTTACTAATCCTAGTACTCTGCTCTAGCTTG
CTTCATAACTCCCATGGCTTTGCTTGATCTGTTGTCGCTTCTCCTCATCAAGACTTTGCATCAT
GTTAGCCAGCCAGTATTTACCCATTGTTAGGAAAATCGAGATGTGGCTGAAGATCAGAGGCTCA
GTTAGCAACCTACGTTGTAGCTGTGATGTCGACCCATTGGTTGTCTTTAGAGAGTTAATGTTGA
AACAAGAAATTCTTGATCAGACAAACGTGATCTGCTGAAGACACATGTGCTTTTGTAGAATTTA
ACATCTGGTGTTTTTCTGAAATATTATATAAATATATATATAAACATATATTGCTTTATTTGAA
ACAAATTAAAATATGCTGCATTTGACA

hide sequence

RefSeq Acc Id:

XM_008767110 ⟹ XP_008765332

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,873,201 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,378,978 - 59,493,864 (+)	NCBI
Rnor_6.0	9	64,729,543 - 64,843,963 (+)	NCBI

Sequence:

show sequence

GCCCCGGTTAGTCCCGCTGCAAGTACATGGCTGGAACACAGGAAACCGGAGCTTCAACGAGCAA
GTAATCAACCTCCACTCACTTTGGGCTTATACCCCTAGAAGGAAGATGGCTGAACTCAACACTC
ATGTGAATGTCAAAGAGAAGATCTACGCAGTTAGATCAGTTGTTCCGAACAAAAGCAATAATGA
AATTGTCCTGGTGCTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTGCAAGCCTTTGTGGAC
GGCAGTGCTATTCAGGTTCTTAAAGAATGGAGCATGACGGGGAAAAAGAAGAATAACAAAAGAA
AAAGAAGCAAATCCAAGCAGCATCAAGGCAACAAAGATGCTAAGGACAAGGGGGAGAGGCCGGA
GGTGGGGCCCCTGCAGCCCCAGGCACCACTGGTACAAAATGGTCACATGAATGGCTGTGAAAAG
GACAGCTCATCCCCTGACTCTGCCAGAGAAAAACTGGCCCTCACACCACGTGAGAAAAAGATCT
CAATACTGGAGGAACCACCAAGGGCTCAGCGTGGGATCACAGAAGGCAGCAGACTACTGCAGCA
GAAAATGTCCTTAGATGGGAACCCCAAAGCTATTCATGGACCATCAGAGAGGTCAGATGGCCTA
CAGTGGTCAGCTGGGCAGCCTTGTAACCCAAGCAAGCCTAAGGCAAAAACATCTCCTGTTAAGT
CCAATGCCCCTGCAGCTCATCTTGAAATAAAGCCAGATGAGCTGGCAAAGAAAAGAGGTCCAAA
TATTGAGAAATCGGTGAAGGATCTGCAGCGCTGCACTGTTTCTCTGACGAGATACCGAGTCATG
ATCAAGGAAGAGGTGGACAGTTCTGTGAAGAAGATCAAAGCAGCTTTTGCTGAGCTACACAACT
GCATCATTGACAAAGAAGTTTCACTGATGGCAGAGATGGATAAAGTTAAAGAAGAAGCCATGGA
CATCCTGACTGCCCGTCAGAAGAAGGCAGAGGAGCTGAAGCGACTGACTGATCTAGCCAGTCAA
ATGGCAGAGATGCAGCTGGCCGAACTCAGAGCTGAAATTAAGCACTTTGTCAGCGAACGCAAAT
ATGATGAAGAGCTAGGGAAAGCCGCCCGCTTCTCCTGCGACATTGAACAGCTGAAAGCCCAAAT
CCTGATCTGCGGAGAAATCACACATCCAAAGAACAACTATTCCTCAAGAACTCCCTGCAGCTCC
CTGTTGCCTCTGCTGAACACTCATGCGGTAGCTTCCGGGAAGCAGGGGAATTTTTCCCGGAAGT
CATCCGGTCACAACAAGCCCAATGAGGGGAAAGCAGCGAACCCCAAAATGGTGAGCGGTCTTCC
CAGCACTGCCGATGCATGTCAGCAGACCATGCCTACTAACAAGCAGCAGAATGGACCTTCCAAC
CAAAGACGAAGATTTAATCCACAGTATCACAACAGGCTAAATGGTCCAGCCAAGTCACAGGGCA
GTGGTAATGAAGCTGATCCCATGGTGAAGAGCAACAACCGACATGAACACAGAAGACAGCCACA
TAATGGTTTTCGTCCCAAAAACAAAGGTGGTGCCAAAAACCAAGAGGCCCCCTTGGGGACAAAG
GCCCCAGAGGCCCCACCACATTCTGAAAAGGCCCGTCGAAGGCAGCACGCTGCAGACAACTTAG
AGACCAGGCCTTTCCGGGGTAATGTTGGTAGGGTTTCACAGTGCAATCTTTGTCCCACTAGAAT
AGAAGTTTCCACAGAGGCCACGGTTCTCTCAGTCCCAGCTGTGACGCTGGTGGCCTGAGCTGGG
AAGGAAGAGAGCAGGTTTTGCCTGGTTTTGGTTCCCTGCCCAAGGTGCTGACCCAATTCGCTGC
CAAAAGAGAGTCAATCAGAATATACAAACCTGTATGTTTGTGTCGTTCTCTCGCAATCATTTTT
ACTAATCCTAGTACTCTGCTCTAGCTTGCTTCATAACTCCCATGGCTTTGCTTGATCTGTTGTC
GCTTCTCCTCATCAAGACTTTGCATCATGTTAGCCAGCCAGTATTTACCCATTGTTAGGAAAAT
CGAGATGTGGCTGAAGATCAGAGGCTCAGTTAGCAACCTACGTTGTAGCTGTGATGTCGACCCA
TTGGTTGTCTTTAGAGAGTTAATGTTGAAACAAGAAATTCTTGATCAGACAAACGTGATCTGCT
GAAGACACATGTGCTTTTGTAGAATTTAACATCTGGTGTTTTTCTGAAATATTATATAAATATA
TATATAAACATATATTGCTTTATTTGAAACAAATTAAAATATGCTGCATTTGACA

hide sequence

RefSeq Acc Id:

XM_017596460 ⟹ XP_017451949

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,482 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,320,251 - 59,493,864 (+)	NCBI
Rnor_6.0	9	64,643,579 - 64,843,963 (+)	NCBI

Sequence:

show sequence

GGGCAGCAAAGTTCGTTTTCCTCGGAGACTCCAGAAGCCAGGCTGCTTTCGGGAACAACTCTGT
GGATTCCCAGGTCCTGTGGTCAGAGCTGAAGGCCCCGGTTAGTCCCGCTGCAAGTACATGGCTG
GAACACAGGAAACCGGAGCTTCAACGAGCAAGGCTTATACCCCTAGAAGGAAGATGGCTGAACT
CAACACTCATGTGAATGTCAAAGAGAAGATCTACGCAGTTAGATCAGTTGTTCCGAACAAAAGC
AATAATGAAATTGTCCTGGTGCTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTGCAAGCCT
TTGTGGACGGCAGTGCTATTCAGGTTCTTAAAGAATGGAGCATGACGGGGAAAAAGAAGAATAA
CAAAAGAAAAAGAAGCAAATCCAAGCAGCATCAAGGCAACAAAGATGCTAAGGACAAGGGGGAG
AGGCCGGAGGTGGGGCCCCTGCAGCCCCAGGCACCACTGGTACAAAATGGTCACATGAATGGCT
GTGAAAAGGACAGCTCATCCCCTGACTCTGCCAGAGAAAAACTGGCCCTCACACCACGTGAGAA
AAAGATCTCAATACTGGAGGAACCACCAAGGGCTCAGCGTGGGATCACAGAAGGCAGCAGACTA
CTGCAGCAGAAAATGTCCTTAGATGGGAACCCCAAAGCTATTCATGGACCATCAGAGAGGTCAG
ATGGCCTACAGTGGTCAGCTGGGCAGCCTTGTAACCCAAGCAAGCCTAAGGCAAAAACATCTCC
TGTTAAGTCCAATGCCCCTGCAGCTCATCTTGAAATAAAGCCAGATGAGCTGGCAAAGAAAAGA
GGTCCAAATATTGAGAAATCGGTGAAGGATCTGCAGCGCTGCACTGTTTCTCTGACGAGATACC
GAGTCATGATCAAGGAAGAGGTGGACAGTTCTGTGAAGAAGATCAAAGCAGCTTTTGCTGAGCT
ACACAACTGCATCATTGACAAAGAAGTTTCACTGATGGCAGAGATGGATAAAGTTAAAGAAGAA
GCCATGGACATCCTGACTGCCCGTCAGAAGAAGGCAGAGGAGCTGAAGCGACTGACTGATCTAG
CCAGTCAAATGGCAGAGATGCAGCTGGCCGAACTCAGAGCTGAAATTAAGCACTTTGTCAGCGA
ACGCAAATATGATGAAGAGCTAGGGAAAGCCGCCCGCTTCTCCTGCGACATTGAACAGCTGAAA
GCCCAAATCCTGATCTGCGGAGAAATCACACATCCAAAGAACAACTATTCCTCAAGAACTCCCT
GCAGCTCCCTGTTGCCTCTGCTGAACACTCATGCGGTAGCTTCCGGGAAGCAGGGGAATTTTTC
CCGGAAGTCATCCGGTCACAACAAGCCCAATGAGGGGAAAGCAGCGAACCCCAAAATGGTGAGC
GGTCTTCCCAGCACTGCCGATGCATGTCAGCAGACCATGCCTACTAACAAGCAGCAGAATGGAC
CTTCCAACCAAAGACGAAGATTTAATCCACAGTATCACAACAGGCTAAATGGTCCAGCCAAGTC
ACAGGGCAGTGGTAATGAAGCTGATCCCATGGTGAAGAGCAACAACCGACATGAACACAGAAGA
CAGCCACATAATGGTTTTCGTCCCAAAAACAAAGGTGGTGCCAAAAACCAAGAGGCCCCCTTGG
GGACAAAGGCCCCAGAGGCCCCACCACATTCTGAAAAGGCCCGTCGAAGGCAGCACGCTGCAGA
CAACTTAGAGACCAGGCCTTTCCGGGGTAATGTTGGTAGGGTTTCACAGTGCAATCTTTGTCCC
ACTAGAATAGAAGTTTCCACAGAGGCCACGGTTCTCTCAGTCCCAGCTGTGACGCTGGTGGCCT
GAGCTGGGAAGGAAGAGAGCAGGTTTTGCCTGGTTTTGGTTCCCTGCCCAAGGTGCTGACCCAA
TTCGCTGCCAAAAGAGAGTCAATCAGAATATACAAACCTGTATGTTTGTGTCGTTCTCTCGCAA
TCATTTTTACTAATCCTAGTACTCTGCTCTAGCTTGCTTCATAACTCCCATGGCTTTGCTTGAT
CTGTTGTCGCTTCTCCTCATCAAGACTTTGCATCATGTTAGCCAGCCAGTATTTACCCATTGTT
AGGAAAATCGAGATGTGGCTGAAGATCAGAGGCTCAGTTAGCAACCTACGTTGTAGCTGTGATG
TCGACCCATTGGTTGTCTTTAGAGAGTTAATGTTGAAACAAGAAATTCTTGATCAGACAAACGT
GATCTGCTGAAGACACATGTGCTTTTGTAGAATTTAACATCTGGTGTTTTTCTGAAATATTATA
TAAATATATATATAAACATATATTGCTTTATTTGAAACAAATTAAAATATGCTGCATTTGACA

hide sequence

RefSeq Acc Id:

XM_039083627 ⟹ XP_038939555

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,815,013 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,320,727 - 59,493,864 (+)	NCBI

RefSeq Acc Id:

XM_039083628 ⟹ XP_038939556

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,791 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,320,537 - 59,493,864 (+)	NCBI

RefSeq Acc Id:

XM_039083629 ⟹ XP_038939557

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,839,657 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,345,453 - 59,493,864 (+)	NCBI

RefSeq Acc Id:

XM_039083630 ⟹ XP_038939558

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,815,013 - 66,988,084 (+)	NCBI
mRatBN7.2	9	59,320,727 - 59,493,834 (+)	NCBI

RefSeq Acc Id:

XM_063267193 ⟹ XP_063123263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,266 - 66,988,084 (+)	NCBI

RefSeq Acc Id:

XM_063267194 ⟹ XP_063123264

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,266 - 66,988,084 (+)	NCBI

RefSeq Acc Id:

XM_063267195 ⟹ XP_063123265

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,266 - 66,988,084 (+)	NCBI

RefSeq Acc Id:

XM_063267196 ⟹ XP_063123266

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,266 - 66,988,084 (+)	NCBI

RefSeq Acc Id:

XM_063267197 ⟹ XP_063123267

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,620 - 66,988,084 (+)	NCBI

RefSeq Acc Id:

XM_063267198 ⟹ XP_063123268

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,815,013 - 66,988,084 (+)	NCBI

RefSeq Acc Id:

XM_063267199 ⟹ XP_063123269

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,815,013 - 66,988,084 (+)	NCBI

RefSeq Acc Id:

XM_063267200 ⟹ XP_063123270

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,898 - 66,988,084 (+)	NCBI

RefSeq Acc Id:

XM_063267201 ⟹ XP_063123271

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	66,814,742 - 66,988,084 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014124	(Get FASTA)	NCBI Sequence Viewer
	XP_006245052	(Get FASTA)	NCBI Sequence Viewer
	XP_006245054	(Get FASTA)	NCBI Sequence Viewer
	XP_008765332	(Get FASTA)	NCBI Sequence Viewer
	XP_017451949	(Get FASTA)	NCBI Sequence Viewer
	XP_038939555	(Get FASTA)	NCBI Sequence Viewer
	XP_038939556	(Get FASTA)	NCBI Sequence Viewer
	XP_038939557	(Get FASTA)	NCBI Sequence Viewer
	XP_038939558	(Get FASTA)	NCBI Sequence Viewer
	XP_063123263	(Get FASTA)	NCBI Sequence Viewer
	XP_063123264	(Get FASTA)	NCBI Sequence Viewer
	XP_063123265	(Get FASTA)	NCBI Sequence Viewer
	XP_063123266	(Get FASTA)	NCBI Sequence Viewer
	XP_063123267	(Get FASTA)	NCBI Sequence Viewer
	XP_063123268	(Get FASTA)	NCBI Sequence Viewer
	XP_063123269	(Get FASTA)	NCBI Sequence Viewer
	XP_063123270	(Get FASTA)	NCBI Sequence Viewer
	XP_063123271	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH85874	(Get FASTA)	NCBI Sequence Viewer
	EDL99016	(Get FASTA)	NCBI Sequence Viewer
	EDL99017	(Get FASTA)	NCBI Sequence Viewer
	EDL99018	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021527
	ENSRNOP00000021527.6
	ENSRNOP00000069610
	ENSRNOP00000069610.2
	ENSRNOP00000077000.1
	ENSRNOP00000077858.1
	ENSRNOP00000081101.1
GenBank Protein	Q5U2T3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001014124 ⟸ NM_001014102

- UniProtKB:

Q5U2T3 (UniProtKB/Swiss-Prot), A6IP44 (UniProtKB/TrEMBL), A0A0G2JVT4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWSMTGK
KKNNKRKRSKSKQHQGNKDAKDKGERPEVGPLQPQAPLVQNGHMNGCEKDSSSPDSAREKLALT
PREKKISILEEPPRAQRGITEGSRLLQQKMSLDGNPKAIHGPSERSDGLQWSAGQPCNPSKPKA
KTSPVKSNAPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAA
FAELHNCIIDKEVSLMAEMDKVKEEAMDILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKH
FVSERKYDEELGKAARFSCDIEQLKAQILICGEITHPKNNYSSRTPCSSLLPLLNTHAVASGKQ
GNFSRKSSGHNKPNEGKAANPKMVSGLPSTADACQQTMPTNKQQNGPSNQRRRFNPQYHNRLNG
PAKSQGSGNEADPMVKSNNRHEHRRQPHNGFRPKNKGGAKNQEAPLGTKAPEAPPHSEKARRRQ
HAADNLETRPFRGNVGRVSQCNLCPTRIEVSTEATVLSVPAVTLVA

hide sequence

RefSeq Acc Id:	XP_006245054 ⟸ XM_006244992
- Peptide Label:	isoform X6
- UniProtKB:	A6IP42 (UniProtKB/TrEMBL), A0A8I5Y6T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGTQETGASTSKAYTPRRKMAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAV QAFVDGSAIQVLKEWSMTGKKKNNKRKRSKSKQHQGNKDAKDKGERPEVGPLQPQAPLVQNGHM NGCEKDSSSPDSAREKLALTPREKKISILEEPPRAQRGITEGSRLLQQKMSLDGNPKAIHGPSE RSDGLQWSAGQPCNPSKPKAKTSPVKSNAPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLT RYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMDILTARQKKAEELKRLT DLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQILICGEITHPKNNYSSR TPCSSLLPLLNTHAVASGKQGNFSRKSSGHNKPNEGKAANPKMVSGLPSTADACQQTMPTNKQQ NGPSNQRRRFNPQYHNRLNGPAKSQGSGNEADPMVKSNNRHEHRRQPHNGFRPKNKGGAKNQEA PLGTKAPEAPPHSEKARRRQHAADNLETRPFRGNVGRVSQCNLCPTRIEVSTEATVLSVPAVTL VA hide sequence

RefSeq Acc Id:

XP_006245052 ⟸ XM_006244990

- Peptide Label:

isoform X5

- Sequence:

show sequence

MNNACLSSPDYCTPRQKHHWRMPREARGSSETPEARLLSGTTLWIPRAYTPRRKMAELNTHVNV
KEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWSMTGKKKNNKRKRSK
SKQHQGNKDAKDKGERPEVGPLQPQAPLVQNGHMNGCEKDSSSPDSAREKLALTPREKKISILE
EPPRAQRGITEGSRLLQQKMSLDGNPKAIHGPSERSDGLQWSAGQPCNPSKPKAKTSPVKSNAP
AAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIID
KEVSLMAEMDKVKEEAMDILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEE
LGKAARFSCDIEQLKAQILICGEITHPKNNYSSRTPCSSLLPLLNTHAVASGKQGNFSRKSSGH
NKPNEGKAANPKMVSGLPSTADACQQTMPTNKQQNGPSNQRRRFNPQYHNRLNGPAKSQGSGNE
ADPMVKSNNRHEHRRQPHNGFRPKNKGGAKNQEAPLGTKAPEAPPHSEKARRRQHAADNLETRP
FRGNVGRVSQCNLCPTRIEVSTEATVLSVPAVTLVA

hide sequence

RefSeq Acc Id:	XP_008765332 ⟸ XM_008767110
- Peptide Label:	isoform X8
- UniProtKB:	Q5U2T3 (UniProtKB/Swiss-Prot), A6IP44 (UniProtKB/TrEMBL), A0A0G2JVT4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWSMTGK KKNNKRKRSKSKQHQGNKDAKDKGERPEVGPLQPQAPLVQNGHMNGCEKDSSSPDSAREKLALT PREKKISILEEPPRAQRGITEGSRLLQQKMSLDGNPKAIHGPSERSDGLQWSAGQPCNPSKPKA KTSPVKSNAPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAA FAELHNCIIDKEVSLMAEMDKVKEEAMDILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKH FVSERKYDEELGKAARFSCDIEQLKAQILICGEITHPKNNYSSRTPCSSLLPLLNTHAVASGKQ GNFSRKSSGHNKPNEGKAANPKMVSGLPSTADACQQTMPTNKQQNGPSNQRRRFNPQYHNRLNG PAKSQGSGNEADPMVKSNNRHEHRRQPHNGFRPKNKGGAKNQEAPLGTKAPEAPPHSEKARRRQ HAADNLETRPFRGNVGRVSQCNLCPTRIEVSTEATVLSVPAVTLVA hide sequence

RefSeq Acc Id:	XP_017451949 ⟸ XM_017596460
- Peptide Label:	isoform X6
- UniProtKB:	A6IP42 (UniProtKB/TrEMBL), A0A8I5Y6T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGTQETGASTSKAYTPRRKMAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAV QAFVDGSAIQVLKEWSMTGKKKNNKRKRSKSKQHQGNKDAKDKGERPEVGPLQPQAPLVQNGHM NGCEKDSSSPDSAREKLALTPREKKISILEEPPRAQRGITEGSRLLQQKMSLDGNPKAIHGPSE RSDGLQWSAGQPCNPSKPKAKTSPVKSNAPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLT RYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMDILTARQKKAEELKRLT DLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQILICGEITHPKNNYSSR TPCSSLLPLLNTHAVASGKQGNFSRKSSGHNKPNEGKAANPKMVSGLPSTADACQQTMPTNKQQ NGPSNQRRRFNPQYHNRLNGPAKSQGSGNEADPMVKSNNRHEHRRQPHNGFRPKNKGGAKNQEA PLGTKAPEAPPHSEKARRRQHAADNLETRPFRGNVGRVSQCNLCPTRIEVSTEATVLSVPAVTL VA hide sequence

RefSeq Acc Id:

ENSRNOP00000021527 ⟸ ENSRNOT00000021527

RefSeq Acc Id:

ENSRNOP00000069610 ⟸ ENSRNOT00000081497

RefSeq Acc Id:	XP_038939556 ⟸ XM_039083628
- Peptide Label:	isoform X6
- UniProtKB:	A6IP42 (UniProtKB/TrEMBL), A0A8I5Y6T6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939555 ⟸ XM_039083627
- Peptide Label:	isoform X6
- UniProtKB:	A6IP42 (UniProtKB/TrEMBL), A0A8I5Y6T6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939558 ⟸ XM_039083630
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZRR1 (UniProtKB/TrEMBL), A6IP43 (UniProtKB/TrEMBL), A0A8I5Y6T6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939557 ⟸ XM_039083629
- Peptide Label:	isoform X8
- UniProtKB:	Q5U2T3 (UniProtKB/Swiss-Prot), A6IP44 (UniProtKB/TrEMBL), A0A0G2JVT4 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000081101 ⟸ ENSRNOT00000104709

RefSeq Acc Id:

ENSRNOP00000077000 ⟸ ENSRNOT00000100381

RefSeq Acc Id:

ENSRNOP00000077858 ⟸ ENSRNOT00000103936

RefSeq Acc Id:	XP_063123263 ⟸ XM_063267193
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063123264 ⟸ XM_063267194
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063123265 ⟸ XM_063267195
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063123266 ⟸ XM_063267196
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063123267 ⟸ XM_063267197
- Peptide Label:	isoform X6
- UniProtKB:	A6IP42 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123271 ⟸ XM_063267201
- Peptide Label:	isoform X8
- UniProtKB:	Q5U2T3 (UniProtKB/Swiss-Prot), A6IP44 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123270 ⟸ XM_063267200
- Peptide Label:	isoform X8
- UniProtKB:	Q5U2T3 (UniProtKB/Swiss-Prot), A6IP44 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123268 ⟸ XM_063267198
- Peptide Label:	isoform X7
- UniProtKB:	A0A8L2QB71 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123269 ⟸ XM_063267199
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I5Y992 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5U2T3-F1-model_v2	AlphaFold	Q5U2T3	1-558	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696680

Promoter ID:

EPDNEW_R7205

Type:

single initiation site

Name:

Spats2l_1

Description:

spermatogenesis associated, serine-rich 2-like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	64,745,240 - 64,745,300	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309930	AgrOrtholog
BioCyc Gene	G2FUF-27475	BioCyc
Ensembl Genes	ENSRNOG00000016012	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021527.7	UniProtKB/TrEMBL
	ENSRNOT00000081497	ENTREZGENE
	ENSRNOT00000081497.2	UniProtKB/TrEMBL
	ENSRNOT00000100381.1	UniProtKB/TrEMBL
	ENSRNOT00000103936.1	UniProtKB/TrEMBL
	ENSRNOT00000104709.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7191441	IMAGE-MGC_LOAD
InterPro	DUF1387	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	UBA-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:316426	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:94640	IMAGE-MGC_LOAD
NCBI Gene	316426	ENTREZGENE
PANTHER	PTHR15623	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SPATS2-LIKE PROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	DUF1387	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Spats2l	PhenoGen
RatGTEx	ENSRNOG00000016012	RatGTEx
Superfamily-SCOP	SSF46934	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2JVT4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y6T6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y992	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZRR1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QB71	ENTREZGENE, UniProtKB/TrEMBL
	A6IP42	ENTREZGENE, UniProtKB/TrEMBL
	A6IP43	ENTREZGENE, UniProtKB/TrEMBL
	A6IP44	ENTREZGENE, UniProtKB/TrEMBL
	Q5U2T3	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-05-24	Spats2l	spermatogenesis associated, serine-rich 2-like	LOC100360294	spermatogenesis associated, serine-rich 2-like	Data merged from RGD:2322457	1643240	APPROVED
2010-05-06	LOC100360294	spermatogenesis associated, serine-rich 2-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2010-02-12	Spats2l	spermatogenesis associated, serine-rich 2-like	RGD1309930	similar to 2810022L02Rik protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1309930	similar to 2810022L02Rik protein	RGD1309930_predicted	similar to 2810022L02Rik protein (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1309930_predicted	similar to 2810022L02Rik protein (predicted)	LOC316426_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC316426_predicted	similar to 2810022L02Rik protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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