Gene: Col8a1 (collagen type VIII alpha 1 chain) Rattus norvegicus
Symbol: Col8a1
Name: collagen type VIII alpha 1 chain
Description: INVOLVED IN camera-type eye morphogenesis (ortholog); endodermal cell differentiation (ortholog); epithelial cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; FOUND IN extracellular exosome (ortholog); extracellular matrix (ortholog); intracellular membrane-bounded organelle (ortholog); INTERACTS WITH 2-amino-2-deoxy-D-glucopyranose; 6-propyl-2-thiouracil; aldehydo-D-glucosamine
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: collagen alpha-1(VIII) chain; collagen, type VIII, alpha 1; LOC304021; procollagen, type VIII, alpha 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01144,877,690 - 45,006,203 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01148,073,158 - 48,201,421 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41143,604,994 - 43,733,870 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11143,785,922 - 43,791,642 (+)NCBI
Celera1142,573,892 - 42,702,340 (+)NCBI
Cytogenetic Map11q12NCBImapview
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Col8a1
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1309361
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2016-08-16
Status: ACTIVE