Unc5d (unc-5 netrin receptor D) - Rat Genome Database

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Gene: Unc5d (unc-5 netrin receptor D) Rattus norvegicus
Analyze
Symbol: Unc5d
Name: unc-5 netrin receptor D
RGD ID: 1309245
Description: Predicted to enable netrin receptor activity. Predicted to be involved in axon guidance and cell-cell adhesion via plasma-membrane adhesion molecules. Predicted to act upstream of or within pyramidal neuron differentiation and regulation of neuron migration. Predicted to be located in cell surface. Orthologous to human UNC5D (unc-5 netrin receptor D); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC306534; netrin receptor UNC5D; unc-5 homolog D; unc-5 homolog D (C. elegans)
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81669,563,099 - 70,109,862 (+)NCBIGRCr8
mRatBN7.21662,860,119 - 63,406,932 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1662,860,174 - 63,401,143 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1668,180,210 - 68,720,853 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01671,587,000 - 72,127,274 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01666,825,629 - 67,366,198 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01667,047,803 - 67,601,002 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1667,350,539 - 67,595,225 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01666,680,658 - 67,229,761 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41667,102,595 - 67,688,733 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11667,399,384 - 67,688,999 (+)NCBI
Celera1660,855,487 - 61,392,321 (+)NCBICelera
Cytogenetic Map16q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18547816   PMID:21673655   PMID:22726835   PMID:26235030  


Genomics

Comparative Map Data
Unc5d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81669,563,099 - 70,109,862 (+)NCBIGRCr8
mRatBN7.21662,860,119 - 63,406,932 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1662,860,174 - 63,401,143 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1668,180,210 - 68,720,853 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01671,587,000 - 72,127,274 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01666,825,629 - 67,366,198 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01667,047,803 - 67,601,002 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1667,350,539 - 67,595,225 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01666,680,658 - 67,229,761 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41667,102,595 - 67,688,733 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11667,399,384 - 67,688,999 (+)NCBI
Celera1660,855,487 - 61,392,321 (+)NCBICelera
Cytogenetic Map16q12.3NCBI
UNC5D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38835,235,475 - 35,796,540 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl835,235,475 - 35,796,550 (+)EnsemblGRCh38hg38GRCh38
GRCh37835,092,993 - 35,654,058 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36835,521,452 - 35,771,722 (+)NCBINCBI36Build 36hg18NCBI36
Build 34835,521,451 - 35,771,722NCBI
Celera834,042,678 - 34,602,076 (+)NCBICelera
Cytogenetic Map8p12NCBI
HuRef833,626,645 - 34,186,384 (+)NCBIHuRef
CHM1_1835,294,423 - 35,853,759 (+)NCBICHM1_1
T2T-CHM13v2.0835,511,078 - 36,072,635 (+)NCBIT2T-CHM13v2.0
Unc5d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39829,136,745 - 29,709,698 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl829,136,745 - 29,709,664 (-)EnsemblGRCm39 Ensembl
GRCm38828,646,717 - 29,219,671 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl828,646,717 - 29,219,636 (-)EnsemblGRCm38mm10GRCm38
MGSCv37829,757,189 - 30,330,108 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36830,117,986 - 30,685,572 (-)NCBIMGSCv36mm8
Celera830,134,290 - 30,708,462 (-)NCBICelera
Cytogenetic Map8A2- A3NCBI
cM Map816.47NCBI
Unc5d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546311,532,711 - 11,779,202 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546311,404,164 - 11,785,100 (+)NCBIChiLan1.0ChiLan1.0
UNC5D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2753,803,508 - 54,360,749 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1829,520,367 - 30,078,812 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0834,544,056 - 35,101,535 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1831,724,467 - 32,282,061 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl831,724,796 - 32,276,697 (+)Ensemblpanpan1.1panPan2
UNC5D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11629,204,364 - 29,733,726 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1629,210,853 - 29,732,912 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1629,722,634 - 30,251,554 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01631,133,953 - 31,662,872 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1631,134,431 - 31,662,849 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11629,323,494 - 29,851,670 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01629,901,276 - 30,430,553 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01629,940,376 - 30,469,840 (-)NCBIUU_Cfam_GSD_1.0
Unc5d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494352,309,770 - 52,350,135 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493697328,551 - 71,710 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UNC5D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1550,201,404 - 50,802,668 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11550,197,131 - 50,804,604 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21557,370,625 - 57,646,881 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UNC5D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1833,275,467 - 33,838,619 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl833,592,115 - 33,832,629 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660528,139,969 - 8,705,073 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Unc5d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247807,951,155 - 8,495,332 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247807,949,944 - 8,495,431 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Unc5d
4416 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:55
Count of miRNA genes:49
Interacting mature miRNAs:54
Transcripts:ENSRNOT00000015879
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)162432551369325513Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
8694429Bw164Body weight QTL 16450.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)165272646484729064Rat
8694364Abfw7Abdominal fat weight QTL 712.220.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)165272646484729064Rat
7411648Foco22Food consumption QTL 22150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)165272646484729064Rat
631525Pia14Pristane induced arthritis QTL 144.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)165571108783402471Rat

Markers in Region
D16Got127  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21663,111,433 - 63,111,615 (+)MAPPERmRatBN7.2
Rnor_6.01667,300,852 - 67,301,033NCBIRnor6.0
Rnor_5.01666,932,584 - 66,932,765UniSTSRnor5.0
Celera1661,104,944 - 61,105,125UniSTS
Cytogenetic Map16q12.3UniSTS
D16Nkg102  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21663,087,941 - 63,088,246 (+)MAPPERmRatBN7.2
Rnor_6.01667,277,394 - 67,277,698NCBIRnor6.0
Rnor_5.01666,910,112 - 66,910,416UniSTSRnor5.0
RGSC_v3.41667,330,028 - 67,330,332UniSTSRGSC3.4
Celera1661,082,814 - 61,083,118UniSTS
Cytogenetic Map16q12.3UniSTS
BE119290  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21663,063,447 - 63,063,610 (+)MAPPERmRatBN7.2
Rnor_6.01667,252,512 - 67,252,674NCBIRnor6.0
Rnor_5.01666,885,230 - 66,885,392UniSTSRnor5.0
RGSC_v3.41667,305,534 - 67,305,696UniSTSRGSC3.4
Celera1661,058,074 - 61,058,236UniSTS
Cytogenetic Map16q12.3UniSTS
D7S1476  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21663,239,517 - 63,240,283 (+)MAPPERmRatBN7.2
Rnor_6.01667,428,877 - 67,429,642NCBIRnor6.0
Rnor_5.01667,059,553 - 67,060,318UniSTSRnor5.0
RGSC_v3.41667,505,464 - 67,506,229UniSTSRGSC3.4
Celera1661,232,509 - 61,233,274UniSTS
Cytogenetic Map16q12.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 52 2
Low 1 23 15 1 15 22 32 34 10
Below cutoff 1 33 17 12 13 12 8 11 1 7 1 8

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000015879   ⟹   ENSRNOP00000015879
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1663,160,474 - 63,401,143 (+)Ensembl
Rnor_6.0 Ensembl1667,350,580 - 67,595,213 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000085659   ⟹   ENSRNOP00000075244
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1662,860,174 - 63,401,143 (+)Ensembl
Rnor_6.0 Ensembl1667,350,539 - 67,595,225 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000111680   ⟹   ENSRNOP00000077568
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1662,860,174 - 63,401,143 (+)Ensembl
RefSeq Acc Id: NM_001107319   ⟹   NP_001100789
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,411 - 70,104,078 (+)NCBI
mRatBN7.21662,860,429 - 63,401,143 (+)NCBI
Rnor_6.01667,048,092 - 67,595,213 (+)NCBI
Rnor_5.01666,680,658 - 67,229,761 (+)NCBI
Celera1660,855,487 - 61,392,321 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600135   ⟹   XP_017455624
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,100 - 70,109,862 (+)NCBI
mRatBN7.21662,860,120 - 63,406,932 (+)NCBI
Rnor_6.01667,047,803 - 67,601,002 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600136   ⟹   XP_017455625
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,099 - 70,109,862 (+)NCBI
mRatBN7.21662,860,119 - 63,406,932 (+)NCBI
Rnor_6.01667,047,803 - 67,601,002 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600137   ⟹   XP_017455626
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,100 - 70,109,862 (+)NCBI
mRatBN7.21662,860,119 - 63,406,932 (+)NCBI
Rnor_6.01667,047,803 - 67,601,002 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600138   ⟹   XP_017455627
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,099 - 70,109,862 (+)NCBI
mRatBN7.21662,860,119 - 63,406,932 (+)NCBI
Rnor_6.01667,047,803 - 67,601,002 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600139   ⟹   XP_017455628
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,100 - 70,109,862 (+)NCBI
mRatBN7.21662,860,119 - 63,406,932 (+)NCBI
Rnor_6.01667,047,803 - 67,601,002 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600140   ⟹   XP_017455629
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,100 - 70,109,862 (+)NCBI
mRatBN7.21662,860,119 - 63,406,932 (+)NCBI
Rnor_6.01667,047,803 - 67,601,002 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039094548   ⟹   XP_038950476
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,100 - 70,109,862 (+)NCBI
mRatBN7.21662,860,119 - 63,406,932 (+)NCBI
RefSeq Acc Id: XM_039094549   ⟹   XP_038950477
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81669,563,099 - 70,109,862 (+)NCBI
mRatBN7.21662,860,119 - 63,406,932 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001100789   ⟸   NM_001107319
- Peptide Label: precursor
- UniProtKB: F1LW30 (UniProtKB/Swiss-Prot),   A0A0R3P9D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455625   ⟸   XM_017600136
- Peptide Label: isoform X2
- UniProtKB: A0A0R3P9D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455624   ⟸   XM_017600135
- Peptide Label: isoform X1
- UniProtKB: A0A0G2KA37 (UniProtKB/TrEMBL),   A0A0R3P9D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455626   ⟸   XM_017600137
- Peptide Label: isoform X4
- UniProtKB: A0A0R3P9D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455627   ⟸   XM_017600138
- Peptide Label: isoform X5
- UniProtKB: A0A0R3P9D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455628   ⟸   XM_017600139
- Peptide Label: isoform X6
- UniProtKB: A0A0R3P9D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455629   ⟸   XM_017600140
- Peptide Label: isoform X8
- UniProtKB: A0A0R3P9D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000075244   ⟸   ENSRNOT00000085659
RefSeq Acc Id: ENSRNOP00000015879   ⟸   ENSRNOT00000015879
RefSeq Acc Id: XP_038950476   ⟸   XM_039094548
- Peptide Label: isoform X3
- UniProtKB: A0A0R3P9D5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950477   ⟸   XM_039094549
- Peptide Label: isoform X7
- UniProtKB: A0A0R3P9D5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000077568   ⟸   ENSRNOT00000111680
Protein Domains
Death   Ig-like   Ig-like C2-type   TSP type-1   ZU5

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LW30-F1-model_v2 AlphaFold F1LW30 1-956 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309245 AgrOrtholog
BioCyc Gene G2FUF-11056 BioCyc
Ensembl Genes ENSRNOG00000011858 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055012231 UniProtKB/Swiss-Prot
  ENSRNOG00060011323 UniProtKB/Swiss-Prot
  ENSRNOG00065002658 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000015879.8 UniProtKB/TrEMBL
  ENSRNOT00000085659.2 UniProtKB/TrEMBL
  ENSRNOT00000111680 ENTREZGENE
  ENSRNOT00000111680.1 UniProtKB/Swiss-Prot
  ENSRNOT00055020815 UniProtKB/Swiss-Prot
  ENSRNOT00060019181 UniProtKB/Swiss-Prot
  ENSRNOT00065003578 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.533.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.20.100.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.220.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro DEATH-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Death_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP1_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP1_rpt_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UNC5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UNC5D_Death UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:306534 UniProtKB/Swiss-Prot
NCBI Gene 306534 ENTREZGENE
PANTHER NETRIN RECEPTOR UNC5D UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12582 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Death UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Unc5d PhenoGen
PRINTS TSP1REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011858 RatGTEx
  ENSRNOG00055012231 RatGTEx
  ENSRNOG00060011323 RatGTEx
  ENSRNOG00065002658 RatGTEx
SMART DEATH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47986 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF82895 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2KA37 ENTREZGENE, UniProtKB/TrEMBL
  A0A0R3P9D5 ENTREZGENE, UniProtKB/TrEMBL
  F1LW30 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-06-26 Unc5d  unc-5 netrin receptor D  Unc5d  unc-5 homolog D (C. elegans)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Unc5d  unc-5 homolog D (C. elegans)   Unc5d_predicted  unc-5 homolog D (C. elegans) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Unc5d_predicted  unc-5 homolog D (C. elegans) (predicted)      Symbol and Name status set to approved 70820 APPROVED