Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | atrial fibrillation | | ISO | NACA (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:29892015 and PMID:30061737 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | atrial fibrillation | | ISO | NACA (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:29892015 and PMID:30061737 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:9488445 | PMID:12477932 | PMID:20458337 | PMID:21071677 | PMID:22206666 | PMID:23376485 | PMID:23662692 | PMID:35352799 |
Naca (Rattus norvegicus - Norway rat) |
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NACA (Homo sapiens - human) |
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Naca (Mus musculus - house mouse) |
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Naca (Chinchilla lanigera - long-tailed chinchilla) |
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LOC100995452 (Pan paniscus - bonobo/pygmy chimpanzee) |
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NACA (Canis lupus familiaris - dog) |
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Naca (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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NACA (Sus scrofa - pig) |
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LOC103238541 (Chlorocebus sabaeus - green monkey) |
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Variants in Naca
52 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH138645 |
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UniSTS:236920 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 3 | 43 | 57 | 41 | 19 | 41 | 8 | 11 | 74 | 35 | 41 | 11 | 8 |
Low | |||||||||||||
Below cutoff |
RefSeq Transcripts | NM_001105939 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001198562 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001198580 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039078540 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039078541 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | BC166934 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BP494723 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH474104 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ215294 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ221213 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ221678 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ222263 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ225664 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ231879 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000007 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000003550 ⟹ ENSRNOP00000003550 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000075681 ⟹ ENSRNOP00000066181 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000085092 ⟹ ENSRNOP00000075523 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001105939 ⟹ NP_001099409 | ||||||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001198562 ⟹ NP_001185491 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001198580 ⟹ NP_001185509 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039078540 ⟹ XP_038934468 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039078541 ⟹ XP_038934469 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Protein RefSeqs | NP_001099409 | (Get FASTA) | NCBI Sequence Viewer |
NP_001185491 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001185509 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038934468 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038934469 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAI66934 | (Get FASTA) | NCBI Sequence Viewer |
EDL84893 | (Get FASTA) | NCBI Sequence Viewer | |
EDL84894 | (Get FASTA) | NCBI Sequence Viewer | |
EDL84895 | (Get FASTA) | NCBI Sequence Viewer | |
EDL84896 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000003550 | ||
ENSRNOP00000003550.6 | |||
ENSRNOP00000066181 | |||
ENSRNOP00000066181.1 | |||
ENSRNOP00000075523 | |||
ENSRNOP00000075523.2 |
RefSeq Acc Id: | NP_001099409 ⟸ NM_001105939 |
- Peptide Label: | isoform 1 |
- UniProtKB: | B2RYX0 (UniProtKB/TrEMBL), A0A0G2KAT8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001185491 ⟸ NM_001198562 |
- Peptide Label: | isoform 1 |
- UniProtKB: | B2RYX0 (UniProtKB/TrEMBL), A0A0G2KAT8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001185509 ⟸ NM_001198580 |
- Peptide Label: | isoform 2 |
- UniProtKB: | M0R9L0 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000075523 ⟸ ENSRNOT00000085092 |
RefSeq Acc Id: | ENSRNOP00000066181 ⟸ ENSRNOT00000075681 |
RefSeq Acc Id: | ENSRNOP00000003550 ⟸ ENSRNOT00000003550 |
RefSeq Acc Id: | XP_038934468 ⟸ XM_039078540 |
- Peptide Label: | isoform X1 |
- UniProtKB: | M0R9L0 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038934469 ⟸ XM_039078541 |
- Peptide Label: | isoform X1 |
- UniProtKB: | M0R9L0 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-M0R9L0-F1-model_v2 | AlphaFold | M0R9L0 | 1-2163 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13694920 | ||||||||
Promoter ID: | EPDNEW_R5445 | ||||||||
Type: | initiation region | ||||||||
Name: | Naca_1 | ||||||||
Description: | nascent polypeptide-associated complex alpha subunit | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1308642 | AgrOrtholog |
BioCyc Gene | G2FUF-35401 | BioCyc |
Ensembl Genes | ENSRNOG00000002632 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000003550 | ENTREZGENE |
ENSRNOT00000003550.8 | UniProtKB/TrEMBL | |
ENSRNOT00000075681 | ENTREZGENE | |
ENSRNOT00000075681.4 | UniProtKB/TrEMBL | |
ENSRNOT00000085092 | ENTREZGENE | |
ENSRNOT00000085092.2 | UniProtKB/TrEMBL | |
Gene3D-CATH | 2.20.70.30 | UniProtKB/TrEMBL |
DNA helicase RuvA subunit, C-terminal domain | UniProtKB/TrEMBL | |
IMAGE_CLONE | IMAGE:6922001 | IMAGE-MGC_LOAD |
InterPro | EGD2/NACA | UniProtKB/TrEMBL |
NAC-like_UBA | UniProtKB/TrEMBL | |
NAC_A/B_dom_sf | UniProtKB/TrEMBL | |
Nas_poly-pep-assoc_cplx_dom | UniProtKB/TrEMBL | |
KEGG Report | rno:288770 | UniProtKB/TrEMBL |
MGC_CLONE | MGC:188929 | IMAGE-MGC_LOAD |
NCBI Gene | 288770 | ENTREZGENE |
PANTHER | NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA, MUSCLE-SPECIFIC FORM | UniProtKB/TrEMBL |
PTHR21713 | UniProtKB/TrEMBL | |
Pfam | HYPK_UBA | UniProtKB/TrEMBL |
NAC | UniProtKB/TrEMBL | |
PhenoGen | Naca | PhenoGen |
PIRSF | NAC_alpha | UniProtKB/TrEMBL |
PRINTS | PRICHEXTENSN | UniProtKB/TrEMBL |
PROSITE | NAC_AB | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000002632 | RatGTEx |
SMART | NAC | UniProtKB/TrEMBL |
UniProt | A0A0G2KAT8 | ENTREZGENE, UniProtKB/TrEMBL |
B2RYX0 | ENTREZGENE, UniProtKB/TrEMBL | |
F7F1W2_RAT | UniProtKB/TrEMBL | |
M0R9L0 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2018-05-18 | Naca | nascent polypeptide associated complex subunit alpha | Naca | nascent polypeptide-associated complex alpha subunit | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2010-04-23 | Naca | nascent polypeptide-associated complex alpha subunit | Naca | nascent-polypeptide-associated complex alpha polypeptide | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-04-30 | Naca | nascent-polypeptide-associated complex alpha polypeptide | Naca_predicted | nascent-polypeptide-associated complex alpha polypeptide (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2005-01-12 | Naca_predicted | nascent-polypeptide-associated complex alpha polypeptide (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |