Rnf32 (ring finger protein 32) - Rat Genome Database

Name: Rnf32
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Rnf32 (ring finger protein 32) Rattus norvegicus

Analyze

Symbol:

Rnf32

Name:

ring finger protein 32

RGD ID:

1308287

Description:

Predicted to be located in several cellular components, including aggresome; endosome; and nuclear body. Orthologous to human RNF32 (ring finger protein 32); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cocaine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC311936

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RNF32 (ring finger protein 32)	HGNC	Ensembl, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rnf32 (ring finger protein 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rnf32 (ring finger protein 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RNF32 (ring finger protein 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RNF32 (ring finger protein 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rnf32 (ring finger protein 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RNF32 (ring finger protein 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RNF32 (ring finger protein 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rnf32 (ring finger protein 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PTGR3 (prostaglandin reductase 3)	HGNC	OMA
Homo sapiens (human):	TSHZ1 (teashirt zinc finger homeobox 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	RNF32 (ring finger protein 32)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rnf32 (ring finger protein 32)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rnf32 (ring finger protein 32)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rnf32	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	6,822,700 - 6,884,411 (-)	NCBI		GRCr8
mRatBN7.2	4	6,144,749 - 6,209,320 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	6,149,841 - 6,209,257 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	11,109,135 - 11,168,524 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	6,923,377 - 6,982,766 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	5,269,531 - 5,328,920 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	2,053,283 - 2,113,917 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	2,053,712 - 2,111,610 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	2,109,648 - 2,170,282 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	1,349,030 - 1,409,878 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	1,349,029 - 1,409,878 (-)	NCBI
Celera	4	4,122,075 - 4,182,137 (+)	NCBI		Celera
Cytogenetic Map	4	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

genetic disease (ISO)

holoprosencephaly 3 (ISO)

Patterson Stevenson Syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

acrylamide (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

CGP 52608 (ISO)

cocaine (EXP)

crocidolite asbestos (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

folic acid (ISO)

formaldehyde (ISO)

hydrogen peroxide (ISO)

leflunomide (ISO)

mercury dichloride (ISO)

methylmercury chloride (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

pentanal (ISO)

pirinixic acid (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

tris(2-butoxyethyl) phosphate (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

aggresome (ISO)

cytosol (IEA,ISO)

endosome (IEA,ISO)

nuclear body (IEA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11890671	PMID:12477932

Genomics

Comparative Map Data

Rnf32
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	6,822,700 - 6,884,411 (-)	NCBI		GRCr8
mRatBN7.2	4	6,144,749 - 6,209,320 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	6,149,841 - 6,209,257 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	11,109,135 - 11,168,524 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	6,923,377 - 6,982,766 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	5,269,531 - 5,328,920 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	2,053,283 - 2,113,917 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	2,053,712 - 2,111,610 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	2,109,648 - 2,170,282 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	1,349,030 - 1,409,878 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	1,349,029 - 1,409,878 (-)	NCBI
Celera	4	4,122,075 - 4,182,137 (+)	NCBI		Celera
Cytogenetic Map	4	q11	NCBI

RNF32
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	156,640,204 - 156,677,130 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	156,640,281 - 156,677,130 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	156,433,468 - 156,469,824 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	156,126,162 - 156,162,585 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	155,932,876 - 155,969,294	NCBI
Celera	7	150,860,591 - 150,897,015 (+)	NCBI		Celera
Cytogenetic Map	7	q36.3	NCBI
HuRef	7	150,166,182 - 150,202,654 (+)	NCBI		HuRef
CHM1_1	7	156,442,068 - 156,478,539 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	157,827,918 - 157,864,843 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	155,662,737 - 155,699,209 (+)	NCBI

Rnf32
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	29,397,743 - 29,432,633 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	29,400,990 - 29,433,455 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	29,192,745 - 29,227,635 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	29,195,992 - 29,228,457 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	29,524,546 - 29,551,831 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	29,526,865 - 29,556,309 (+)	NCBI		MGSCv36	mm8
Celera	5	26,714,492 - 26,741,677 (+)	NCBI		Celera
Cytogenetic Map	5	B1	NCBI
cM Map	5	14.78	NCBI

Rnf32
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955491	9,130,214 - 9,153,851 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955491	9,128,998 - 9,154,082 (+)	NCBI	ChiLan1.0	ChiLan1.0

RNF32
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	193,087,739 - 193,124,812 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	45,098,005 - 45,134,427 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	148,262,103 - 148,300,794 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	159,956,000 - 159,992,430 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	159,956,081 - 159,992,424 (+)	Ensembl	panpan1.1		panPan2

RNF32
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	19,237,069 - 19,297,984 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	19,235,972 - 19,280,301 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	19,869,109 - 19,913,829 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	20,966,010 - 21,026,851 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	20,965,920 - 21,009,801 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	19,335,537 - 19,380,029 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	19,917,102 - 19,978,033 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	19,969,464 - 20,014,251 (+)	NCBI		UU_Cfam_GSD_1.0

Rnf32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	2,147,921 - 2,181,352 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936797	876,592 - 906,438 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936797	876,305 - 906,252 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RNF32
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	1,941,182 - 1,969,225 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	1,941,176 - 1,969,852 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	1,841,540 - 1,868,763 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RNF32
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	124,778,914 - 124,814,981 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	124,778,982 - 124,814,438 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666072	21,007,739 - 21,043,691 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rnf32
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624800	1,654,885 - 1,690,860 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624800	1,659,598 - 1,690,777 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rnf32
117 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	96
Count of miRNA genes:	58
Interacting mature miRNAs:	61
Transcripts:	ENSRNOT00000007646, ENSRNOT00000045086
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61351	Bp33	Blood pressure QTL 33		0.0018	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	1	27716890	Rat
61408	Scl23	Serum cholesterol level QTL 23		0.0005	blood HDL phospholipid amount (VT:0010504)	serum high density lipoprotein phospholipid level (CMO:0001567)	4	1	27716890	Rat
724557	Plsm1	Polydactyly-luxate syndrome (PLS) morphotypes QTL 1		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	4	1	27716890	Rat
1641905	Colcr1	Colorectal carcinoma resistance QTL 1	4.3	0.0003	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	4	1	29494328	Rat
61333	Gluco16	Glucose level QTL 16	4.3	0.00001	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	1	30372989	Rat
9589097	Slep11	Serum leptin concentration QTL 11	5.09	0.001	blood leptin amount (VT:0005667)	plasma leptin level (CMO:0000781)	4	1	31934116	Rat
8552903	Pigfal2	Plasma insulin-like growth factor 1 level QTL 2	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	4	1	31934116	Rat
9589046	Scfw2	Subcutaneous fat weight QTL 2	5.54	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	4	1	31934116	Rat
9590100	Sffal4	Serum free fatty acids level QTL 4	7.36	0.05	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	4	1	31934116	Rat
738021	Hcar13	Hepatocarcinoma resistance QTL 13	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	4	1	32584199	Rat
1357341	Gluco5	Glucose level QTL 5	6.4		adipocyte free fatty acid secretion trait (VT:0010465)	absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446)	4	1	33250345	Rat
1357343	Gluco4	Glucose level QTL 4		0.00002	adipocyte glucose uptake trait (VT:0004185)	adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)	4	1	33250345	Rat
61415	Eae11	Experimental allergic encephalomyelitis QTL 11	2.9		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	4	1	39505420	Rat
634323	Hc2	Hypercalciuria QTL 2	2.15		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	4	210796	45210796	Rat
619616	Bp79	Blood pressure QTL 79		0.0292	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	5214602	78882945	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5214602	146446691	Rat
2302371	Stl22	Serum triglyceride level QTL 22	5.15		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	5218294	57114705	Rat
1358203	Stl19	Serum triglyceride level QTL 19	2.8	0.002	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	5218294	65958103	Rat
1358201	Gluco12	Glucose level QTL12	1.6		adipocyte glucose uptake trait (VT:0004185)	adipocyte maximal glucose uptake (CMO:0000870)	4	5218392	29593287	Rat
631642	Stl2	Serum triglyceride level QTL 2	3.3		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	5219178	56647776	Rat

Markers in Region

RH131145

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	6,151,252 - 6,151,438 (-)	MAPPER	mRatBN7.2
Rnor_6.0	4	2,110,061 - 2,110,246	NCBI	Rnor6.0
Rnor_5.0	4	2,166,426 - 2,166,611	UniSTS	Rnor5.0
RGSC_v3.4	4	1,350,431 - 1,350,616	UniSTS	RGSC3.4
Celera	4	4,180,551 - 4,180,736	UniSTS
Celera	12	39,769,960 - 39,770,145	UniSTS
Cytogenetic Map	4	q11	UniSTS

RH137700

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	6,166,363 - 6,166,595 (-)	MAPPER	mRatBN7.2
Rnor_6.0	4	2,094,905 - 2,095,136	NCBI	Rnor6.0
Rnor_5.0	4	2,151,270 - 2,151,501	UniSTS	Rnor5.0
RGSC_v3.4	4	1,365,542 - 1,365,773	UniSTS	RGSC3.4
Celera	4	4,165,395 - 4,165,626	UniSTS
Cytogenetic Map	4	q11	UniSTS

RH139955

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	6,189,336 - 6,189,539 (-)	MAPPER	mRatBN7.2
Rnor_6.0	4	2,072,774 - 2,072,976	NCBI	Rnor6.0
Rnor_5.0	4	2,129,139 - 2,129,341	UniSTS	Rnor5.0
RGSC_v3.4	4	1,389,958 - 1,390,160	UniSTS	RGSC3.4
Celera	4	4,141,793 - 4,141,995	UniSTS
Cytogenetic Map	4	q11	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium			2								8
Low	3	27	27	13	19	13	8	9	74	35	33	11	8
Below cutoff		16	22	22		22		2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001395025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_172473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005503207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC083635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000007646 ⟹ ENSRNOP00000007646

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	6,198,135 - 6,209,257 (-)	Ensembl
Rnor_6.0 Ensembl	4	2,055,615 - 2,065,818 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000045086 ⟹ ENSRNOP00000043844

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	6,149,841 - 6,209,257 (-)	Ensembl
Rnor_6.0 Ensembl	4	2,053,712 - 2,111,610 (+)	Ensembl

RefSeq Acc Id:

NM_001395025 ⟹ NP_001381954

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,824,970 - 6,883,976 (-)	NCBI
mRatBN7.2	4	6,149,852 - 6,208,861 (-)	NCBI

RefSeq Acc Id:

NR_172473

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,824,970 - 6,884,372 (-)	NCBI
mRatBN7.2	4	6,149,852 - 6,209,257 (-)	NCBI

RefSeq Acc Id:

XM_006235853 ⟹ XP_006235915

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,884,059 (-)	NCBI
mRatBN7.2	4	6,144,749 - 6,208,890 (-)	NCBI
Rnor_6.0	4	2,053,704 - 2,113,917 (+)	NCBI
Rnor_5.0	4	2,109,648 - 2,170,282 (+)	NCBI

Sequence:

show sequence

CGTGCGCACTCCGAAGCGCACCGGCCGCTAGTTGCCGTGGCAACGAGGAGTGGATCTGAAAAGG
TGCTTCGGAGAGAAGAGGAAGGGCCAGTCAGAAAAAAATGGAAGTTATTGTAATGGGATGCTAA
AGATTGTTGAAGCCTCACCACGGTGTTTCCTGATACAGCATGTTAAAAAATAAGGATCGTTCAT
CTAAAAAAAGTAACTTAGCAGTCTCTGCAGTTGCCTTACAAGACCACATATTACGTGATCTTCA
ACTTGGACATCTCTCAGTAGCAGATCCTTGTAAGACAAAAGTGCAAAAGAAAGAGAACAAATCA
CAATCTCTCAGAAAAGGCTCGGCAGCCATGATGGACACTGGACTTAGAAAGACTGCAGAGGGGC
CTAAAGGGGAAGATCCAGAGAAGGAATATGTTCTAGACCCCACACCACCACCGTTAACTTTAGC
CCAGAAACTGGGTCTCTTGGCACTTCCCCCATTACCACTGTCATCAGATGAATGGGAGAAAGTG
AAGCAGAGATCCCTTCTACAAGGGGACTCCATGCAGCCATGCCCAATATGTAAAGAAGAATTTG
AGCTCCAACCCCAGGTACTGCTTTCCTGCTCACACGTGTTCCATAGGGCATGCCTTCAGGCTTT
TGAAAAGTTCACAAATAGAAAAACCTGTCCTCTCTGTAGAAAGAACCAATATCAAACGAGAGTG
ATACACGACGGGGCTCGTCTGTTCAGAGTAAAGTGTGCCACCAGAATCCAAGCCTATTGGAGAG
GGTACATCGTTAGAAAGTGGTATAGAAACCTGAGAAAAATGATCCCACCTACGGATGCCAAATT
AAGGAGAAAGTTCTTTGAGGAAAAGTTCACAGAAATCAGCCACCGAATCCTGTGCTCATACAAT
ACCAACATAGATGAACTCTTCTCAGAGATTGACGTCTGCTTGGCAGTAAATCGTAGCATTCTTC
AGCAGCTAGATGAAAGGTGTGGCCAGGAGATCACTGAGGAGGACTGGGAGAAAATCCAAGCGCA
GGCTGCTCACCATGAGATCTATGAATGTTCTATCTGCCTGACTCCACTCTTCTTCCACTGCGAT
GGTCGGCAAGCAGCCGCAGGGACCAGCAGCCAGCATCCCCGAGAGACGGTCCTCCTGTCCTGTG
CACATCTGTTCCACAATGCCTGCCTCCTGGCCTTGGAGGAGTTTTCTTTAGGAGACAATGCTCC
TTTCAACGTCTGTCCTCTCTGTCGCTCTTGCTACCAAAAGAAAATTGTTGAATATTGAGTCCAT
GTCCAGGAAGTTAAATCTAGGACTAGAACAAGAGAGGGGAAAAGGCTACCTTGCTTTCGGATGA
GCTGAATGAGTTCTGGGTTGAGGACTACACTACTGACTGTTCTTTGTGATTATATAGAGAAAAT
ATAAGTACCTATTTGACTGTGATCTTTATTACATAAAAAACAGCTTGTGTATTTGTTGAAGTTA
GTCACTTAAAATAAATGAAAAATAGTGTTATTTAGAATGTGGCTAGTGTTATGACCAAGAGCCA
GGAAACCAGAACAGGTAAAACCCACTCAGTGGCATTAGCAGTGCGGGAATGGAGACGGGGGTCT
ATCCTACAGGCCTTTCACGCTCCCGGCTCTTCCTATCGCAAGGATTTAAGTCTCCTTCACCTCA
GCCTTCACCAGGGAATCTGCTCTCTGTGCTGGGAGGCAGTGCCTGTGTGAGACAGCATCCAGCC
TGGATGTCAGTGCAGCAGAGCAGCACGGGGCAAACAGAGGCATGGTCAAGAGCTCAGAACTGTT
CCCACACAGTGTGAGAAGCATTTTACAACTCATTCCTTATTTTTAACCCTTTTAAAATGATATA
TGCATTGATATATATATTGTGAGTTAGTATATACATGTTGTGCTCAAATTCTTCTTAATGACTA
GATATACTATCATGACATCTAGAGGATAATCTTAAGAGTACTCAGTGGTAGAGACAGGCTGCAT
CTCAGAGAACTACTCTTCCATTCCGGAGACTCAGCTGAGAGCACAGTGCAAACTTTTACCATTC
CACCATGCCTTCTTTAGTCAGTGTCACAGGGAAATCAGCATTGATTGGAACATCTCATGCCAGT
GAGAAGGTTCAGAGGCCCATCGAATGTGATGACCCTCTCACTGTGACTTCTTCCTCAGCACAGC
TTCACTGTAATGAACTGATCTCCCCTTAGCTTAGCAGATGTCTCTGCATTTTTGCAAGATTAAG
CCGTCTTGTCACTGCCCACTCCCATTTATACTTAGGAAGCTTGCATGCTCTGGGTTTTAGCAAT
TGTAGTCTCCCTTTCTCCCCACATTGCAGATAGACGTGAGTTTTTCCACACTTATAAACTTTTA
TGGTTGCTGATCTATATAGGACCTGACCCATCCTTAGGCACTCTCATTGCTAACTCATGAACTG
AGTAAGACACTGTCAAAGGAATGCATTTTCAGAGCATTTTGGTCCAGAAAAGGTTTATGTGAGC
CAACAACAGGTGTTCTGAAGCTTCTGCTTGGAGAGCAAGAAGAGTCCTAGAAACCCATGACAAG
CTAGGGTGGAGTCCAGCCTTACGGTGCTTTGTAGGACTCCTTTCCTTTCAAAGTACATGAGACA
GACACATCATTATAAGACTGCAGTGTCACACAGCCCTCTATTATTTATCCTTACTACTCAGGAC
ATAGCTAATGAGTTTTATCCACAAAGTATAGCTAGAACTGGACCTACTTCAAACTTTCTGAATC
CTAAGTAACATTATAGGTTTGAGTAGAGAAAGAGTGTAAGCAAGGGCTTCAGGTAGTGAGTGGC
AAAAGCCAGCTGCTGCTGCTGCTAGTGTTATTTTCAAGATCAAAGTCCTTGCAAGATACATCCC
TAAAATTGGCCTCCTTTTAGAATCACACCATCTTAGACATCTGCTTATTGATCTGCAGTAAGTA
CTGACTGCATTTAAAGAATAGAGGAGGTTCCTTATGTTCCATGGACAGGCAAGCTAGAGTGGCT
ACTCACACTCTCAAGTCCCATCAACACACAGAAGTAAGCCTCCAAAATTTGTCTGCTGTCTGCA
AACTCTGAACATGCCAATGGGAGTCACTGGAATCTAGCTGACCTGGCCTGACCTACCTCTTCAC
TCACGAATGGGGCAACCTCAAATACCTTCAGCTGTTTAGGCTATGCTCCAAAGACATGAAATGG
GGTATGCATTTCCTATCTGACAGTTCAGAGCTGCCCATGTGTCAGGGAGGAACACTTGTTTCCT
GTCCCCATGCTTCTTGCACATCAGCCCCACGTCACAGTCTCTGATGTGAGCTCACAGTAAGACA
CATAAGACATGGCGACCCACCCTGGAGCCTGAGCCAGTGCAGGCCTGCAAGAGAACAAAGGCCA
GACTCTTCAAACAGTAAGCAGTGGGGACAGCCTGGGGTCTCAGGAACATGGTCTGTGCCGTTTA
AGTCTCTGGGTATAATGCTGTAGGAACTTATACCTTTTAAATTTCTGGGTATAATGCTGTAGGA
ACTTACATCTTTGGTGCCAAGGTTTCATGTTTGCAGCAGGACTTTTCATAACAGTTCTTGGGTG
GAATGTGAAAACACTCAGAAAACTTTTGAGGCAACAAATTTACCCAATTAATATTCAAGCTAAC
ACTAACAACAAACCAGATTCATTATGTTTTTCAAATGGAAACCTAGCACCCATTTTGTACTAAT
AGGTCAGGAAATAGCTTCATTTGTGCCTGGTATTTAAAAAAATAATAAACATCAGAAAATGCCA

hide sequence

RefSeq Acc Id:

XM_006235854 ⟹ XP_006235916

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,883,988 (-)	NCBI
mRatBN7.2	4	6,144,749 - 6,208,870 (-)	NCBI
Rnor_6.0	4	2,053,708 - 2,113,917 (+)	NCBI
Rnor_5.0	4	2,109,648 - 2,170,282 (+)	NCBI

Sequence:

show sequence

CGCACTCCGAAGCGCACCGGCCGCTAGTTGCCGTGGCAACGAGGAGTGGATCTGAAAAGGTGCT
TCGGAGAGAAGAGGAAGGGCCAGTAAAAAAATGGAAGTTATTGTAATGGGATGCTAAAGATTGT
TGAAGCCTCACCACGGTGTTTCCTGATACAGCATGTTAAAAAATAAGGATCGTTCATCTAAAAA
AAGTAACTTAGCAGTCTCTGCAGTTGCCTTACAAGACCACATATTACGTGATCTTCAACTTGGA
CATCTCTCAGTAGCAGATCCTTGTAAGACAAAAGTGCAAAAGAAAGAGAACAAATCACAATCTC
TCAGAAAAGGCTCGGCAGCCATGATGGACACTGGACTTAGAAAGACTGCAGAGGGGCCTAAAGG
GGAAGATCCAGAGAAGGAATATGTTCTAGACCCCACACCACCACCGTTAACTTTAGCCCAGAAA
CTGGGTCTCTTGGCACTTCCCCCATTACCACTGTCATCAGATGAATGGGAGAAAGTGAAGCAGA
GATCCCTTCTACAAGGGGACTCCATGCAGCCATGCCCAATATGTAAAGAAGAATTTGAGCTCCA
ACCCCAGGTACTGCTTTCCTGCTCACACGTGTTCCATAGGGCATGCCTTCAGGCTTTTGAAAAG
TTCACAAATAGAAAAACCTGTCCTCTCTGTAGAAAGAACCAATATCAAACGAGAGTGATACACG
ACGGGGCTCGTCTGTTCAGAGTAAAGTGTGCCACCAGAATCCAAGCCTATTGGAGAGGGTACAT
CGTTAGAAAGTGGTATAGAAACCTGAGAAAAATGATCCCACCTACGGATGCCAAATTAAGGAGA
AAGTTCTTTGAGGAAAAGTTCACAGAAATCAGCCACCGAATCCTGTGCTCATACAATACCAACA
TAGATGAACTCTTCTCAGAGATTGACGTCTGCTTGGCAGTAAATCGTAGCATTCTTCAGCAGCT
AGATGAAAGGTGTGGCCAGGAGATCACTGAGGAGGACTGGGAGAAAATCCAAGCGCAGGCTGCT
CACCATGAGATCTATGAATGTTCTATCTGCCTGACTCCACTCTTCTTCCACTGCGATGGTCGGC
AAGCAGCCGCAGGGACCAGCAGCCAGCATCCCCGAGAGACGGTCCTCCTGTCCTGTGCACATCT
GTTCCACAATGCCTGCCTCCTGGCCTTGGAGGAGTTTTCTTTAGGAGACAATGCTCCTTTCAAC
GTCTGTCCTCTCTGTCGCTCTTGCTACCAAAAGAAAATTGTTGAATATTGAGTCCATGTCCAGG
AAGTTAAATCTAGGACTAGAACAAGAGAGGGGAAAAGGCTACCTTGCTTTCGGATGAGCTGAAT
GAGTTCTGGGTTGAGGACTACACTACTGACTGTTCTTTGTGATTATATAGAGAAAATATAAGTA
CCTATTTGACTGTGATCTTTATTACATAAAAAACAGCTTGTGTATTTGTTGAAGTTAGTCACTT
AAAATAAATGAAAAATAGTGTTATTTAGAATGTGGCTAGTGTTATGACCAAGAGCCAGGAAACC
AGAACAGGTAAAACCCACTCAGTGGCATTAGCAGTGCGGGAATGGAGACGGGGGTCTATCCTAC
AGGCCTTTCACGCTCCCGGCTCTTCCTATCGCAAGGATTTAAGTCTCCTTCACCTCAGCCTTCA
CCAGGGAATCTGCTCTCTGTGCTGGGAGGCAGTGCCTGTGTGAGACAGCATCCAGCCTGGATGT
CAGTGCAGCAGAGCAGCACGGGGCAAACAGAGGCATGGTCAAGAGCTCAGAACTGTTCCCACAC
AGTGTGAGAAGCATTTTACAACTCATTCCTTATTTTTAACCCTTTTAAAATGATATATGCATTG
ATATATATATTGTGAGTTAGTATATACATGTTGTGCTCAAATTCTTCTTAATGACTAGATATAC
TATCATGACATCTAGAGGATAATCTTAAGAGTACTCAGTGGTAGAGACAGGCTGCATCTCAGAG
AACTACTCTTCCATTCCGGAGACTCAGCTGAGAGCACAGTGCAAACTTTTACCATTCCACCATG
CCTTCTTTAGTCAGTGTCACAGGGAAATCAGCATTGATTGGAACATCTCATGCCAGTGAGAAGG
TTCAGAGGCCCATCGAATGTGATGACCCTCTCACTGTGACTTCTTCCTCAGCACAGCTTCACTG
TAATGAACTGATCTCCCCTTAGCTTAGCAGATGTCTCTGCATTTTTGCAAGATTAAGCCGTCTT
GTCACTGCCCACTCCCATTTATACTTAGGAAGCTTGCATGCTCTGGGTTTTAGCAATTGTAGTC
TCCCTTTCTCCCCACATTGCAGATAGACGTGAGTTTTTCCACACTTATAAACTTTTATGGTTGC
TGATCTATATAGGACCTGACCCATCCTTAGGCACTCTCATTGCTAACTCATGAACTGAGTAAGA
CACTGTCAAAGGAATGCATTTTCAGAGCATTTTGGTCCAGAAAAGGTTTATGTGAGCCAACAAC
AGGTGTTCTGAAGCTTCTGCTTGGAGAGCAAGAAGAGTCCTAGAAACCCATGACAAGCTAGGGT
GGAGTCCAGCCTTACGGTGCTTTGTAGGACTCCTTTCCTTTCAAAGTACATGAGACAGACACAT
CATTATAAGACTGCAGTGTCACACAGCCCTCTATTATTTATCCTTACTACTCAGGACATAGCTA
ATGAGTTTTATCCACAAAGTATAGCTAGAACTGGACCTACTTCAAACTTTCTGAATCCTAAGTA
ACATTATAGGTTTGAGTAGAGAAAGAGTGTAAGCAAGGGCTTCAGGTAGTGAGTGGCAAAAGCC
AGCTGCTGCTGCTGCTAGTGTTATTTTCAAGATCAAAGTCCTTGCAAGATACATCCCTAAAATT
GGCCTCCTTTTAGAATCACACCATCTTAGACATCTGCTTATTGATCTGCAGTAAGTACTGACTG
CATTTAAAGAATAGAGGAGGTTCCTTATGTTCCATGGACAGGCAAGCTAGAGTGGCTACTCACA
CTCTCAAGTCCCATCAACACACAGAAGTAAGCCTCCAAAATTTGTCTGCTGTCTGCAAACTCTG
AACATGCCAATGGGAGTCACTGGAATCTAGCTGACCTGGCCTGACCTACCTCTTCACTCACGAA
TGGGGCAACCTCAAATACCTTCAGCTGTTTAGGCTATGCTCCAAAGACATGAAATGGGGTATGC
ATTTCCTATCTGACAGTTCAGAGCTGCCCATGTGTCAGGGAGGAACACTTGTTTCCTGTCCCCA
TGCTTCTTGCACATCAGCCCCACGTCACAGTCTCTGATGTGAGCTCACAGTAAGACACATAAGA
CATGGCGACCCACCCTGGAGCCTGAGCCAGTGCAGGCCTGCAAGAGAACAAAGGCCAGACTCTT
CAAACAGTAAGCAGTGGGGACAGCCTGGGGTCTCAGGAACATGGTCTGTGCCGTTTAAGTCTCT
GGGTATAATGCTGTAGGAACTTATACCTTTTAAATTTCTGGGTATAATGCTGTAGGAACTTACA
TCTTTGGTGCCAAGGTTTCATGTTTGCAGCAGGACTTTTCATAACAGTTCTTGGGTGGAATGTG
AAAACACTCAGAAAACTTTTGAGGCAACAAATTTACCCAATTAATATTCAAGCTAACACTAACA
ACAAACCAGATTCATTATGTTTTTCAAATGGAAACCTAGCACCCATTTTGTACTAATAGGTCAG
GAAATAGCTTCATTTGTGCCTGGTATTTAAAAAAATAATAAACATCAGAAAATGCCA

hide sequence

RefSeq Acc Id:

XM_017592602 ⟹ XP_017448091

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,883,977 (-)	NCBI
mRatBN7.2	4	6,144,749 - 6,208,612 (-)	NCBI
Rnor_6.0	4	2,053,802 - 2,113,917 (+)	NCBI

Sequence:

show sequence

TTGTCCTGCAGCGCTGTCCGACAGAAAAAAAGCTCTGGTTCATAGAGAGGGAGAGAGGGCCGAA
CGCGGGTAGTGTTGACGCGGAAGGTGCGGGTCGCTGTGGGCGGTCCGCGGATCCTTCCTATAAG
GCACAAGGCTGTGATGTGGCGAGGGACCTCAAACCAAACTGGGAGAGTATTTTAAACTTAGATG
CCGTCTCTCCAGTGCATTTCTATTGACGCATGTATTAATTGCCTTCTGATCACTGAAAGCAATC
GGTGATTAAATGGCTTGTCGTCTAGTCCTGTGTTTTCCTACCTGGCACAACCTCCTAACCGTGT
GCAAACTAATTACAGTCAGTTTGCTGTTGTGGCAATTAGCGTCAGGCAGAGGTTTATTTCTCAC
CTATTGCCAGTCCAACGGGTCACCATTATGTTTTCTCATACAGTTCGACTACATCTGGCATGTT
TCGTTATTTTTTAAATCATACAATTTGCTAATGCTATGTGACTTTAGTGAGGCACAGTTTTAAC
GCTTTTTACCTTGACATTAGTCACAACGGCACAATACAAATCTGGTGAAATTGTAGACCAAAGA
GCTACCTACTGGTTAACGATGGTATGAATCTTGTTAAAAAAAATAAACTATTTTTATGATGCAT
ACTTGGTCATTGCCAAGTTAGAGGCATTTTGAATTTGGAAAATAATAACAGTGACCTTTCAGTA
GTTTACATGCCTTCCTCCAGCCAAGGCTACTGTAAGAAATACTGCATACAAACTTCTTTCATAG
ATCTCCATGCCAGCAATGAAAAGGAGCAAGAAGCAGAAAAAAATGGAAGTTATTGTAATGGGAT
GCTAAAGATTGTTGAAGCCTCACCACGGTGTTTCCTGATACAGCATGTTAAAAAATAAGGATCG
TTCATCTAAAAAAAGTAACTTAGCAGTCTCTGCAGTTGCCTTACAAGACCACATATTACGTGAT
CTTCAACTTGGACATCTCTCAGTAGCAGATCCTTGTAAGACAAAAGTGCAAAAGAAAGAGAACA
AATCACAATCTCTCAGAAAAGGCTCGGCAGCCATGATGGACACTGGACTTAGAAAGACTGCAGA
GGGGCCTAAAGGGGAAGATCCAGAGAAGGAATATGTTCTAGACCCCACACCACCACCGTTAACT
TTAGCCCAGAAACTGGGTCTCTTGGCACTTCCCCCATTACCACTGTCATCAGATGAATGGGAGA
AAGTGAAGCAGAGATCCCTTCTACAAGGGGACTCCATGCAGCCATGCCCAATATGTAAAGAAGA
ATTTGAGCTCCAACCCCAGGTACTGCTTTCCTGCTCACACGTGTTCCATAGGGCATGCCTTCAG
GCTTTTGAAAAGTTCACAAATAGAAAAACCTGTCCTCTCTGTAGAAAGAACCAATATCAAACGA
GAGTGATACACGACGGGGCTCGTCTGTTCAGAGTAAAGTGTGCCACCAGAATCCAAGCCTATTG
GAGAGGGTACATCGTTAGAAAGTGGTATAGAAACCTGAGAAAAATGATCCCACCTACGGATGCC
AAATTAAGGAGAAAGTTCTTTGAGGAAAAGTTCACAGAAATCAGCCACCGAATCCTGTGCTCAT
ACAATACCAACATAGATGAACTCTTCTCAGAGATTGACGTCTGCTTGGCAGTAAATCGTAGCAT
TCTTCAGCAGCTAGATGAAAGGTGTGGCCAGGAGATCACTGAGGAGGACTGGGAGAAAATCCAA
GCGCAGGCTGCTCACCATGAGATCTATGAATGTTCTATCTGCCTGACTCCACTCTTCTTCCACT
GCGATGGTCGGCAAGCAGCCGCAGGGACCAGCAGCCAGCATCCCCGAGAGACGGTCCTCCTGTC
CTGTGCACATCTGTTCCACAATGCCTGCCTCCTGGCCTTGGAGGAGTTTTCTTTAGGAGACAAT
GCTCCTTTCAACGTCTGTCCTCTCTGTCGCTCTTGCTACCAAAAGAAAATTGTTGAATATTGAG
TCCATGTCCAGGAAGTTAAATCTAGGACTAGAACAAGAGAGGGGAAAAGGCTACCTTGCTTTCG
GATGAGCTGAATGAGTTCTGGGTTGAGGACTACACTACTGACTGTTCTTTGTGATTATATAGAG
AAAATATAAGTACCTATTTGACTGTGATCTTTATTACATAAAAAACAGCTTGTGTATTTGTTGA
AGTTAGTCACTTAAAATAAATGAAAAATAGTGTTATTTAGAATGTGGCTAGTGTTATGACCAAG
AGCCAGGAAACCAGAACAGGTAAAACCCACTCAGTGGCATTAGCAGTGCGGGAATGGAGACGGG
GGTCTATCCTACAGGCCTTTCACGCTCCCGGCTCTTCCTATCGCAAGGATTTAAGTCTCCTTCA
CCTCAGCCTTCACCAGGGAATCTGCTCTCTGTGCTGGGAGGCAGTGCCTGTGTGAGACAGCATC
CAGCCTGGATGTCAGTGCAGCAGAGCAGCACGGGGCAAACAGAGGCATGGTCAAGAGCTCAGAA
CTGTTCCCACACAGTGTGAGAAGCATTTTACAACTCATTCCTTATTTTTAACCCTTTTAAAATG
ATATATGCATTGATATATATATTGTGAGTTAGTATATACATGTTGTGCTCAAATTCTTCTTAAT
GACTAGATATACTATCATGACATCTAGAGGATAATCTTAAGAGTACTCAGTGGTAGAGACAGGC
TGCATCTCAGAGAACTACTCTTCCATTCCGGAGACTCAGCTGAGAGCACAGTGCAAACTTTTAC
CATTCCACCATGCCTTCTTTAGTCAGTGTCACAGGGAAATCAGCATTGATTGGAACATCTCATG
CCAGTGAGAAGGTTCAGAGGCCCATCGAATGTGATGACCCTCTCACTGTGACTTCTTCCTCAGC
ACAGCTTCACTGTAATGAACTGATCTCCCCTTAGCTTAGCAGATGTCTCTGCATTTTTGCAAGA
TTAAGCCGTCTTGTCACTGCCCACTCCCATTTATACTTAGGAAGCTTGCATGCTCTGGGTTTTA
GCAATTGTAGTCTCCCTTTCTCCCCACATTGCAGATAGACGTGAGTTTTTCCACACTTATAAAC
TTTTATGGTTGCTGATCTATATAGGACCTGACCCATCCTTAGGCACTCTCATTGCTAACTCATG
AACTGAGTAAGACACTGTCAAAGGAATGCATTTTCAGAGCATTTTGGTCCAGAAAAGGTTTATG
TGAGCCAACAACAGGTGTTCTGAAGCTTCTGCTTGGAGAGCAAGAAGAGTCCTAGAAACCCATG
ACAAGCTAGGGTGGAGTCCAGCCTTACGGTGCTTTGTAGGACTCCTTTCCTTTCAAAGTACATG
AGACAGACACATCATTATAAGACTGCAGTGTCACACAGCCCTCTATTATTTATCCTTACTACTC
AGGACATAGCTAATGAGTTTTATCCACAAAGTATAGCTAGAACTGGACCTACTTCAAACTTTCT
GAATCCTAAGTAACATTATAGGTTTGAGTAGAGAAAGAGTGTAAGCAAGGGCTTCAGGTAGTGA
GTGGCAAAAGCCAGCTGCTGCTGCTGCTAGTGTTATTTTCAAGATCAAAGTCCTTGCAAGATAC
ATCCCTAAAATTGGCCTCCTTTTAGAATCACACCATCTTAGACATCTGCTTATTGATCTGCAGT
AAGTACTGACTGCATTTAAAGAATAGAGGAGGTTCCTTATGTTCCATGGACAGGCAAGCTAGAG
TGGCTACTCACACTCTCAAGTCCCATCAACACACAGAAGTAAGCCTCCAAAATTTGTCTGCTGT
CTGCAAACTCTGAACATGCCAATGGGAGTCACTGGAATCTAGCTGACCTGGCCTGACCTACCTC
TTCACTCACGAATGGGGCAACCTCAAATACCTTCAGCTGTTTAGGCTATGCTCCAAAGACATGA
AATGGGGTATGCATTTCCTATCTGACAGTTCAGAGCTGCCCATGTGTCAGGGAGGAACACTTGT
TTCCTGTCCCCATGCTTCTTGCACATCAGCCCCACGTCACAGTCTCTGATGTGAGCTCACAGTA
AGACACATAAGACATGGCGACCCACCCTGGAGCCTGAGCCAGTGCAGGCCTGCAAGAGAACAAA
GGCCAGACTCTTCAAACAGTAAGCAGTGGGGACAGCCTGGGGTCTCAGGAACATGGTCTGTGCC
GTTTAAGTCTCTGGGTATAATGCTGTAGGAACTTATACCTTTTAAATTTCTGGGTATAATGCTG
TAGGAACTTACATCTTTGGTGCCAAGGTTTCATGTTTGCAGCAGGACTTTTCATAACAGTTCTT
GGGTGGAATGTGAAAACACTCAGAAAACTTTTGAGGCAACAAATTTACCCAATTAATATTCAAG
CTAACACTAACAACAAACCAGATTCATTATGTTTTTCAAATGGAAACCTAGCACCCATTTTGTA
CTAATAGGTCAGGAAATAGCTTCATTTGTGCCTGGTATTTAAAAAAATAATAAACATCAGAAAA
TGCCA

hide sequence

RefSeq Acc Id:

XM_017592605 ⟹ XP_017448094

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,869,923 - 6,884,008 (-)	NCBI
mRatBN7.2	4	6,195,983 - 6,208,891 (-)	NCBI
Rnor_6.0	4	2,053,701 - 2,065,635 (+)	NCBI

Sequence:

show sequence

GCGCGTGCGCACTCCGAAGCGCACCGGCCGCTAGTTGCCGTGGCAACGAGGAGTGGATCTGAAA
AGGTGCTTCGGAGAGAAGAGGAAGGGCCAGTCAGAAAAAAATGGAAGTTATTGTAATGGGATGC
TAAAGATTGTTGAAGCCTCACCACGGTGTTTCCTGATACAGCATGTTAAAAAATAAGGATCGTT
CATCTAAAAAAAGTAACTTAGCAGTCTCTGCAGTTGCCTTACAAGACCACATATTACGTGATCT
TCAACTTGGACATCTCTCAGTAGCAGATCCTTGTAAGACAAAAGTGCAAAAGAAAGAGAACAAA
TCACAATCTCTCAGAAAAGGCTCGGCAGCCATGATGGACACTGGACTTAGAAAGACTGCAGAGG
GGCCTAAAGGGGAAGATCCAGAGAAGGAATATGTTCTAGACCCCACACCACCACCGTTAACTTT
AGCCCAGAAACTGGGTCTCTTGGCACTTCCCCCATTACCACTGTCATCAGATGAATGGGAGAAA
GTGAAGCAGAGATCCCTTCTACAAGGGGACTCCATGCAGCCATGCCCAATATGTAAAGAAGAAT
TTGAGCTCCAACCCCAGGTACTGCTTTCCTGCTCACACGTGTTCCATAGGGCATGCCTTCAGGC
TTTTGAAAAGTTCACAAATAGAAAAACCTGTCCTCTCTGTAGAAAGAACCAATATCAAACGAGA
GTGATACACGACGGGGCTCGTCTGTTCAGAGTAAAGTGTGCCACCAGAATCCAAGCCTATTGGA
GAGGGTACATCGTTAGAAAGTGGTATAGAAACCTGAGAAAAATGATCCCACCTACGGATGCCAA
ATTAAGGAGAAAGTTCTTTGAGGAAAAGACTCATATATCTCAGAGGAAGAAATGGAATATATAC
AACCTTGTGTGTAGCTTTGCCCTTACCTGGGTGAGACAACCCATTTCAACTATGCTATAACAAA
ACTGATTATAAAGCAATATGGTGAGACTGGACCCAGATCTGAAGGGACACGGTCAAACAGCTCC
TTGCACCCAAATCCCGTGGGAAGGAG

hide sequence

RefSeq Acc Id:

XM_017592606 ⟹ XP_017448095

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,841,340 - 6,884,007 (-)	NCBI
mRatBN7.2	4	6,160,853 - 6,208,890 (-)	NCBI
Rnor_6.0	4	2,053,703 - 2,098,137 (+)	NCBI

Sequence:

show sequence

GCGTGCGCACTCCGAAGCGCACCGGCCGCTAGTTGCCGTGGCAACGAGGAGTGGATCTGAAAAG
GTGCTTCGGAGAGAAGAGGAAGGGCCAGTCAGAAAAAAATGGAAGTTATTGTAATGGGATGCTA
AAGATTGTTGAAGCCTCACCACGGTGTTTCCTGATACAGCATGTTAAAAAATAAGGATCGTTCA
TCTAAAAAAAGTAACTTAGCAGTCTCTGCAGTTGCCTTACAAGACCACATATTACGTGATCTTC
AACTTGGACATCTCTCAGTAGCAGATCCTTGTAAGACAAAAGTGCAAAAGAAAGAGAACAAATC
ACAATCTCTCAGAAAAGGCTCGGCAGCCATGATGGACACTGGACTTAGAAAGACTGCAGAGGGG
CCTAAAGGGGAAGATCCAGAGAAGGAATATGTTCTAGACCCCACACCACCACCGTTAACTTTAG
CCCAGAAACTGGGTCTCTTGGCACTTCCCCCATTACCACTGTCATCAGATGAATGGGAGAAAGT
GAAGCAGAGATCCCTTCTACAAGGGGACTCCATGCAGCCATGCCCAATATGTAAAGAAGAATTT
GAGCTCCAACCCCAGGTACTGCTTTCCTGCTCACACGTGTTCCATAGGGCATGCCTTCAGGCTT
TTGAAAAGTTCACAAATAGAAAAACCTGTCCTCTCTGTAGAAAGAACCAATATCAAACGAGAGT
GATACACGACGGGGCTCGTCTGTTCAGAGTAAAGTGTGCCACCAGAATCCAAGCCTATTGGAGA
GGGTACATCGTTAGAAAGTGGTATAGAAACCTGAGAAAAATGATCCCACCTACGGATGCCAAAT
TAAGGAGAAAGTTCTTTGAGGAAAAGATCTCTCTATGCTACTGACAATGGCTCTAGGCCTGCAA
AGATTACTGCTGCTGAGCTGAACCTGAGACTCTGAAGAGCAAGACCAGTCCTTTGTCTCCTTCA
GACACCTGAGACACGTCAGGGTGTTGACAACTTTACATCAGTACTGTGCTTTTCAGCTAATCAC
TGGTGTTTTACTGAATTTTGCCACCAGAAATCACTTCAAAATCTAGAGAAGCATTGTTCCTTTT
CCATTTTATCCTTCCTCCAAGAAGGAATTTGTACCGCAATGCTTCCAAATGTGTACATTTAGGG
CATCTCATTTCTAATCTTTTGCAAACAGGAAGTCAACATTTTTCAGTGCTAAGAGCTTTACATA
GATGGATCAGGTGCTTCCCTAGATCTGTGTTGCTCATCTGAAGAAATGAGAAATATACACAAAA
TAGGTAACACTGGCCCTCAAACATCCCACAAGTCCAGTGGGAGAGCAGAGGAGAGATTACTTTT
AGCCCATGCCATGGCAACACATGGAAATGCAAGTGCAGGAAGAGGGAAAGCAGCAGTTATTCAC
AGAACTAAGCAAGCACATAGGCCAGACCACAAGATTCCTTCAAGACAGCTTTTGCTGAAGTCAG
TGGTGACAAATGACACAGACATGGGAAAAGCCAGTGCAGCCCCAGCTCTGGCCACCTAACTTCT
AAAATACAGTACAGTTTGCCCTCTCCTCATCCCCCAGGAGCCTGCGGTCCCAGGACACTAGTAC
TGTCAGTAGTGTTCCTGCTACCCTAGGAGCTCTTCATTGAAAGAAGAGTGCTTGTGGTCTTTGA
TCCTCATGATTGTACACTGCCTGTTAAACACTAGCTCAGTCCCTGCGCTGTTCTAATAACCAGC
CCCACACAAATGGTTAAATACTAAAAGTTTTAAATTTAAAAGTTAAAAAGAAGTGTGAGCTGGA
AGTGTAAATGTGACATTACTCTACTAGCAGAGTTCTTCCTTGAGTTCCAGGCCAGCCAGAACTA
CAGATTCATATTTTGACTTCATAAAACAAAAGATATTAAATTTCAAGAAACAGTAGATACCATG
AGAGCAGACAAGGAGACAGAGGGAGCAGAAAAAAGCCGATTTGGAATAAGGGATATGGGAAGAT
GAATGTGAATAGAAACAAAGCCAGTGGACCCTGCCACCCCTGGAAGGATGTCTTGAAAGGCCTG
GCATGCAAGCTACCCTGGGCCATCTACAGGATGCAGGGGCCTGGTTGGTGGCATCCTTATAGTG
GAGTAGGCTCAGAGCTGGCCTAAGAGGCCACTGGAGGGTAGTAGCCATAATGTATAGGCATTGC
CTACCAGGGAGTGCTCAGGGACAAGACCATAGGCTTTGCTCATGAATCAATGGAAGACCTTGAG
GAAAGAGGCCTACAGCTATGGTCTTGTGATTTGGGCTCACAGATCCAAACTTAACTATATTTTG
GGCTGGGGAGGATCCCTTAGGCTTGTTGCTTGGGGTGCCTCTGAGATCTCAAAGGGAAATGCTT
CCTGGCCCGAACTCAGGAGCAAATAGTATTAGTACTACAAGAAGCTGCAAGGTACAGCAAGGAA
AGGACAGAGAAAAGAGTGGGACTCAGAAGACAGCTAGCAAAGAGGTGAGAGAACGAACACCACC
ATGCCTGGGATTCCCTCTTATGTCTCATGCTCCCAGAAGGAATGACCAGGTATGGGTATGGGAG
GCCCCTTGCTCCCCAGCATGGACATGTCAAAAGGAGAGGGTGGTGTACTGAATCTGGAGCTAGA
AGCTATGAGATGGGAACAGCTGCAGCTAATGACAATTATGTGAGGGATATGAATACTGTAGTCC
AGGTGACAGGACCAAGCCATGAAATGAAAACACAGAAAAAAAATTTAAAATACAGTTTTTCTCT
TTTCTTTGGCCTTTTAAGTTGTGATTTAATGTTTAGAATAACTTTATAAGTTATAAGCATATCA
CTTAGCTTTAACTATATGGTGACTGTTAAGGTAGTGATTTGATGACTAAATTCACATGTGGATG
CAGAGTTAACAGTTTCTTGCCCATCACTTCTCAGAACAGCTGCAGGGCTAAAGGAGCTGCCTGC
CTGGGCTATGGTCATGCTGCAGTTCTAGTATTCTATCTTTTGCTCCTCAAGTCTTGCTCCTCAC
TGCCACATGTTGAGTCTGTGACACTGCTCCTGGGAACATGTGAACCCCAGTAAGGAAACCAACA
CCAGAGCAAAGTCACAACAAAGTCACCAACAGAGAGCAACTCGGTGAACAATGAGTTTATTGAG
CTTACTTAAAAGAGGATGGATGACTCAAAGGCAGATAACATCACAGAAAGCCCACCACAGCATG
AAGATCCCCTCTCTCTACATAGCATGCAGGTAGCTCGATGAATCAGTCTCCTCTCTTCAGCAGT
CCTTAGTGTTTATATATTTGGGGAAGGGGCCTTGGTGAGTGCTCAATTTCAGGGCCTTCCAGAG
ATTGAGTTGTTTACTTTCTAAGTCTTAATCAGCTTTTCTCCCTCCAGGATGGAATTTCTACATA
GCACTGGGGTCACTGGTGACCACCTTCTCCCAGGGAAAGGGCCTCAACTGCCCTGGCCACCTTC
ACCTTCTCCTCTCAGGGGGAGTGTCTCACAGAAATCACAAATGGAGATGGTGTTGGTAGGCTCC
ATTATCGTATCAAAACTGAGAAGAAAAAGTGAATTAATTTAAAGGACAAAAGAAACAGCTTGAA
GCAGCAATCTGAAGCTAAACCAGACCAAACTTGAGTTGTCTCATCAAAGAACCTTAATTTGACT
TAAAAGAGATCAGTGTTCCACCTAGTAAATGCTGTGGATGACCTCAGGCTGAGAATTCTGACAA
GGTATTGAAAGGAAGGGCACCTGCACCATATAGATAAGATGTCTCAGAGGTTCAGCAGAAGCCA
GAAGACTGGGCATCAGCAGGGGGAATGAAACAGCCTAGAACTCTGTGTGAGCTAAATGAAAAGC
ATGTGTAAGAAGAGAGGCCAAGAGAGACATGAGTTCAGATGGACGATGTGGTTATGACTCTAAA
AGCCTTTTTGTTCCCTAAAGAAAGT

hide sequence

RefSeq Acc Id:

XM_039107487 ⟹ XP_038963415

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,883,977 (-)	NCBI
mRatBN7.2	4	6,144,749 - 6,208,612 (-)	NCBI

RefSeq Acc Id:

XM_039107488 ⟹ XP_038963416

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,884,411 (-)	NCBI
mRatBN7.2	4	6,144,749 - 6,209,320 (-)	NCBI

RefSeq Acc Id:

XM_039107489 ⟹ XP_038963417

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,883,977 (-)	NCBI
mRatBN7.2	4	6,144,749 - 6,208,670 (-)	NCBI

RefSeq Acc Id:

XM_039107490 ⟹ XP_038963418

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,884,411 (-)	NCBI
mRatBN7.2	4	6,144,749 - 6,209,320 (-)	NCBI

RefSeq Acc Id:

XM_039107491 ⟹ XP_038963419

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,826,142 - 6,884,008 (-)	NCBI
mRatBN7.2	4	6,151,059 - 6,208,891 (-)	NCBI

RefSeq Acc Id:

XM_063285929 ⟹ XP_063141999

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,883,977 (-)	NCBI

RefSeq Acc Id:

XM_063285930 ⟹ XP_063142000

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,883,977 (-)	NCBI

RefSeq Acc Id:

XM_063285931 ⟹ XP_063142001

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,883,993 (-)	NCBI

RefSeq Acc Id:

XM_063285932 ⟹ XP_063142002

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,822,700 - 6,884,008 (-)	NCBI

RefSeq Acc Id:

XM_063285933 ⟹ XP_063142003

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,869,923 - 6,883,993 (-)	NCBI

RefSeq Acc Id:

XM_063285934 ⟹ XP_063142004

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,869,923 - 6,883,977 (-)	NCBI

RefSeq Acc Id:

XM_063285935 ⟹ XP_063142005

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,841,340 - 6,883,991 (-)	NCBI

RefSeq Acc Id:

XM_063285936 ⟹ XP_063142006

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,873,807 - 6,884,008 (-)	NCBI

RefSeq Acc Id:

XR_005503207

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	6,826,142 - 6,884,007 (-)	NCBI
mRatBN7.2	4	6,151,039 - 6,208,890 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001381954	(Get FASTA)	NCBI Sequence Viewer
	XP_006235915	(Get FASTA)	NCBI Sequence Viewer
	XP_006235916	(Get FASTA)	NCBI Sequence Viewer
	XP_017448091	(Get FASTA)	NCBI Sequence Viewer
	XP_017448094	(Get FASTA)	NCBI Sequence Viewer
	XP_017448095	(Get FASTA)	NCBI Sequence Viewer
	XP_038963415	(Get FASTA)	NCBI Sequence Viewer
	XP_038963416	(Get FASTA)	NCBI Sequence Viewer
	XP_038963417	(Get FASTA)	NCBI Sequence Viewer
	XP_038963418	(Get FASTA)	NCBI Sequence Viewer
	XP_038963419	(Get FASTA)	NCBI Sequence Viewer
	XP_063141999	(Get FASTA)	NCBI Sequence Viewer
	XP_063142000	(Get FASTA)	NCBI Sequence Viewer
	XP_063142001	(Get FASTA)	NCBI Sequence Viewer
	XP_063142002	(Get FASTA)	NCBI Sequence Viewer
	XP_063142003	(Get FASTA)	NCBI Sequence Viewer
	XP_063142004	(Get FASTA)	NCBI Sequence Viewer
	XP_063142005	(Get FASTA)	NCBI Sequence Viewer
	XP_063142006	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83635	(Get FASTA)	NCBI Sequence Viewer
	EDL86421	(Get FASTA)	NCBI Sequence Viewer
	EDL86423	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000007646.8
	ENSRNOP00000043844
	ENSRNOP00000043844.3

RefSeq Acc Id:	XP_006235915 ⟸ XM_006235853
- Peptide Label:	isoform X1
- UniProtKB:	F7ENQ2 (UniProtKB/TrEMBL), A6KJM0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKNKDRSSKKSNLAVSAVALQDHILRDLQLGHLSVADPCKTKVQKKENKSQSLRKGSAAMMDT GLRKTAEGPKGEDPEKEYVLDPTPPPLTLAQKLGLLALPPLPLSSDEWEKVKQRSLLQGDSMQP CPICKEEFELQPQVLLSCSHVFHRACLQAFEKFTNRKTCPLCRKNQYQTRVIHDGARLFRVKCA TRIQAYWRGYIVRKWYRNLRKMIPPTDAKLRRKFFEEKFTEISHRILCSYNTNIDELFSEIDVC LAVNRSILQQLDERCGQEITEEDWEKIQAQAAHHEIYECSICLTPLFFHCDGRQAAAGTSSQHP RETVLLSCAHLFHNACLLALEEFSLGDNAPFNVCPLCRSCYQKKIVEY hide sequence

RefSeq Acc Id:	XP_006235916 ⟸ XM_006235854
- Peptide Label:	isoform X1
- UniProtKB:	F7ENQ2 (UniProtKB/TrEMBL), A6KJM0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKNKDRSSKKSNLAVSAVALQDHILRDLQLGHLSVADPCKTKVQKKENKSQSLRKGSAAMMDT GLRKTAEGPKGEDPEKEYVLDPTPPPLTLAQKLGLLALPPLPLSSDEWEKVKQRSLLQGDSMQP CPICKEEFELQPQVLLSCSHVFHRACLQAFEKFTNRKTCPLCRKNQYQTRVIHDGARLFRVKCA TRIQAYWRGYIVRKWYRNLRKMIPPTDAKLRRKFFEEKFTEISHRILCSYNTNIDELFSEIDVC LAVNRSILQQLDERCGQEITEEDWEKIQAQAAHHEIYECSICLTPLFFHCDGRQAAAGTSSQHP RETVLLSCAHLFHNACLLALEEFSLGDNAPFNVCPLCRSCYQKKIVEY hide sequence

RefSeq Acc Id:	XP_017448094 ⟸ XM_017592605
- Peptide Label:	isoform X4
- UniProtKB:	D4A0T7 (UniProtKB/TrEMBL), Q5XIP3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKNKDRSSKKSNLAVSAVALQDHILRDLQLGHLSVADPCKTKVQKKENKSQSLRKGSAAMMDT GLRKTAEGPKGEDPEKEYVLDPTPPPLTLAQKLGLLALPPLPLSSDEWEKVKQRSLLQGDSMQP CPICKEEFELQPQVLLSCSHVFHRACLQAFEKFTNRKTCPLCRKNQYQTRVIHDGARLFRVKCA TRIQAYWRGYIVRKWYRNLRKMIPPTDAKLRRKFFEEKTHISQRKKWNIYNLVCSFALTWVRQP ISTML hide sequence

RefSeq Acc Id:	XP_017448095 ⟸ XM_017592606
- Peptide Label:	isoform X5
- UniProtKB:	D4A0T7 (UniProtKB/TrEMBL), Q5XIP3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKNKDRSSKKSNLAVSAVALQDHILRDLQLGHLSVADPCKTKVQKKENKSQSLRKGSAAMMDT GLRKTAEGPKGEDPEKEYVLDPTPPPLTLAQKLGLLALPPLPLSSDEWEKVKQRSLLQGDSMQP CPICKEEFELQPQVLLSCSHVFHRACLQAFEKFTNRKTCPLCRKNQYQTRVIHDGARLFRVKCA TRIQAYWRGYIVRKWYRNLRKMIPPTDAKLRRKFFEEKISLCY hide sequence

RefSeq Acc Id:	XP_017448091 ⟸ XM_017592602
- Peptide Label:	isoform X1
- UniProtKB:	F7ENQ2 (UniProtKB/TrEMBL), A6KJM0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKNKDRSSKKSNLAVSAVALQDHILRDLQLGHLSVADPCKTKVQKKENKSQSLRKGSAAMMDT GLRKTAEGPKGEDPEKEYVLDPTPPPLTLAQKLGLLALPPLPLSSDEWEKVKQRSLLQGDSMQP CPICKEEFELQPQVLLSCSHVFHRACLQAFEKFTNRKTCPLCRKNQYQTRVIHDGARLFRVKCA TRIQAYWRGYIVRKWYRNLRKMIPPTDAKLRRKFFEEKFTEISHRILCSYNTNIDELFSEIDVC LAVNRSILQQLDERCGQEITEEDWEKIQAQAAHHEIYECSICLTPLFFHCDGRQAAAGTSSQHP RETVLLSCAHLFHNACLLALEEFSLGDNAPFNVCPLCRSCYQKKIVEY hide sequence

RefSeq Acc Id:

ENSRNOP00000043844 ⟸ ENSRNOT00000045086

RefSeq Acc Id:

ENSRNOP00000007646 ⟸ ENSRNOT00000007646

RefSeq Acc Id:	XP_038963418 ⟸ XM_039107490
- Peptide Label:	isoform X1
- UniProtKB:	F7ENQ2 (UniProtKB/TrEMBL), A6KJM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963416 ⟸ XM_039107488
- Peptide Label:	isoform X1
- UniProtKB:	F7ENQ2 (UniProtKB/TrEMBL), A6KJM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963417 ⟸ XM_039107489
- Peptide Label:	isoform X1
- UniProtKB:	F7ENQ2 (UniProtKB/TrEMBL), A6KJM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963415 ⟸ XM_039107487
- Peptide Label:	isoform X1
- UniProtKB:	F7ENQ2 (UniProtKB/TrEMBL), A6KJM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963419 ⟸ XM_039107491
- Peptide Label:	isoform X6

RefSeq Acc Id:	NP_001381954 ⟸ NM_001395025
- UniProtKB:	F7ENQ2 (UniProtKB/TrEMBL), A6KJM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142002 ⟸ XM_063285932
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063142001 ⟸ XM_063285931
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063142000 ⟸ XM_063285930
- Peptide Label:	isoform X1
- UniProtKB:	A6KJM0 (UniProtKB/TrEMBL), F7ENQ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063141999 ⟸ XM_063285929
- Peptide Label:	isoform X1
- UniProtKB:	A6KJM0 (UniProtKB/TrEMBL), F7ENQ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142005 ⟸ XM_063285935
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063142003 ⟸ XM_063285933
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063142004 ⟸ XM_063285934
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063142006 ⟸ XM_063285936
- Peptide Label:	isoform X7

Protein Domains

RING-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F7ENQ2-F1-model_v2	AlphaFold	F7ENQ2	1-368	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692774

Promoter ID:

EPDNEW_R3295

Type:

initiation region

Name:

Rnf32_1

Description:

ring finger protein 32

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	2,053,737 - 2,053,797	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308287	AgrOrtholog
BioCyc Gene	G2FUF-46163	BioCyc
Ensembl Genes	ENSRNOG00000005691	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000007646.9	UniProtKB/TrEMBL
	ENSRNOT00000045086.4	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.190	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7134691	IMAGE-MGC_LOAD
InterPro	IQ_CaM_bd_region	UniProtKB/TrEMBL
	RNF32	UniProtKB/TrEMBL
	Znf-RING_euk	UniProtKB/TrEMBL
	Znf_RING	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
KEGG Report	rno:311936	UniProtKB/TrEMBL
MGC_CLONE	MGC:94450	IMAGE-MGC_LOAD
NCBI Gene	311936	ENTREZGENE
PANTHER	PTHR14991	UniProtKB/TrEMBL
	RING FINGER PROTEIN 32	UniProtKB/TrEMBL
Pfam	PF00612	UniProtKB/TrEMBL
	zf-RING_UBOX	UniProtKB/TrEMBL
PhenoGen	Rnf32	PhenoGen
PROSITE	PS50096	UniProtKB/TrEMBL
	ZF_RING_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000005691	RatGTEx
SMART	RING	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
UniProt	A0A8J8YNN4_RAT	UniProtKB/TrEMBL
	A6KJM0	ENTREZGENE, UniProtKB/TrEMBL
	D4A0T7	ENTREZGENE
	F7ENQ2	ENTREZGENE, UniProtKB/TrEMBL
	Q5XIP3	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	D4A0T7	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Rnf32	ring finger protein 32	Rnf32_predicted	ring finger protein 32 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Rnf32_predicted	ring finger protein 32 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar