Rfesd (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 7,220,389 - 7,254,394 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 5,495,067 - 5,521,095 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 5,505,756 - 5,522,449 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 12,613,039 - 12,622,713 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 10,712,268 - 10,721,942 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 5,348,621 - 5,358,302 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 2,758,382 - 2,784,366 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 2,769,400 - 2,779,109 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 2,756,829 - 2,782,885 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 3,054,514 - 3,064,195 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 3,073,913 - 3,083,625 (-) | NCBI | | | | | Celera | 2 | 1,975,682 - 1,985,254 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q11 | NCBI | | | | |
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RFESD (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 95,646,777 - 95,658,082 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 95,646,777 - 95,684,773 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 94,982,481 - 94,993,786 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 95,008,340 - 95,018,600 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 5 | 90,860,909 - 90,871,275 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q15 | NCBI | | | | | HuRef | 5 | 90,172,825 - 90,183,191 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 94,415,152 - 94,425,520 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 96,147,700 - 96,159,005 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Rfesd (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 76,149,654 - 76,166,831 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 76,149,654 - 76,166,838 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 76,001,535 - 76,018,712 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 76,001,535 - 76,018,719 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 76,138,983 - 76,156,160 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 76,467,537 - 76,484,564 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 78,330,947 - 78,337,560 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | C1 | NCBI | | | | | cM Map | 13 | 40.95 | NCBI | | | | |
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Rfesd (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955418 | 16,896,522 - 16,912,749 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955418 | 16,897,714 - 16,900,324 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RFESD (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 19,722,030 - 19,732,451 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 17,873,819 - 17,886,063 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 19,692,054 - 19,702,479 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 19,836,388 - 19,847,697 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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RFESD (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 3 | 13,948,582 - 13,961,241 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 13,949,145 - 13,951,503 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 15,287,714 - 15,300,380 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 13,828,716 - 13,841,719 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 3 | 13,829,287 - 13,831,644 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 3 | 13,791,524 - 13,804,372 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 13,789,361 - 13,801,979 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 13,988,766 - 14,001,420 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Rfesd (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024407213 | 169,493,816 - 169,506,043 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936523 | 7,678,444 - 7,691,453 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936523 | 7,679,232 - 7,691,447 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RFESD (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 102,243,726 - 102,255,000 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 102,243,788 - 102,254,278 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 95,686,349 - 95,696,840 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RFESD (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 4 | 89,524,162 - 89,576,505 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 4 | 89,531,494 - 89,533,764 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666049 | 38,169,595 - 38,180,862 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rfesd (Heterocephalus glaber - naked mole-rat) |
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