Phc3 (polyhomeotic homolog 3) - Rat Genome Database

Name: Phc3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Phc3 (polyhomeotic homolog 3) Rattus norvegicus

Analyze

Symbol:

Phc3

Name:

polyhomeotic homolog 3

RGD ID:

1307998

Description:

Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in negative regulation of DNA-templated transcription. Predicted to be located in nucleoplasm. Predicted to be part of PRC1 complex. Predicted to be active in nucleus. Orthologous to human PHC3 (polyhomeotic homolog 3); PARTICIPATES IN histone modification pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC310258; polyhomeotic homolog 3 (Drosophila); polyhomeotic like 3; polyhomeotic like 3 (Drosophila) ; polyhomeotic-like protein 3

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PHC3 (polyhomeotic homolog 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Phc3 (polyhomeotic 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Phc3 (polyhomeotic homolog 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PHC3 (polyhomeotic homolog 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PHC3 (polyhomeotic homolog 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Phc3 (polyhomeotic homolog 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PHC3 (polyhomeotic homolog 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PHC3 (polyhomeotic homolog 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Phc3 (polyhomeotic homolog 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PHC3 (polyhomeotic homolog 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Phc3 (polyhomeotic 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-230g15.5	Alliance	DIOPT (Hieranoid\|PANTHER)
Drosophila melanogaster (fruit fly):	ph-d	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	ph-p	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	phc3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI		GRCr8
mRatBN7.2	2	112,408,709 - 112,483,719 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	112,408,531 - 112,476,540 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	119,066,709 - 119,130,894 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	117,179,274 - 117,243,458 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	111,882,251 - 111,946,375 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	116,028,735 - 116,103,227 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	116,028,781 - 116,096,045 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	135,723,966 - 135,798,433 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	116,831,190 - 116,895,396 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	116,772,507 - 116,840,332 (+)	NCBI
Celera	2	107,599,159 - 107,663,187 (+)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 1 (ISO)

Fanconi syndrome (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

antirheumatic drug (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bortezomib (ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbon nanotube (ISO)

choline (ISO)

ciguatoxin CTX1B (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

CU-O LINKAGE (ISO)

cyclosporin A (ISO)

cylindrospermopsin (ISO)

dicrotophos (ISO)

disodium selenite (ISO)

doxorubicin (ISO)

enzyme inhibitor (ISO)

ethyl methanesulfonate (ISO)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

L-methionine (ISO)

leflunomide (ISO)

methapyrilene (ISO)

methyl methanesulfonate (ISO)

N,N-diethyl-m-toluamide (EXP)

nickel atom (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

permethrin (EXP)

sodium arsenate (ISO)

succimer (ISO)

temozolomide (ISO)

thioacetamide (EXP)

torcetrapib (ISO)

troglitazone (ISO)

valproic acid (EXP,ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

negative regulation of DNA-templated transcription (IBA)

Cellular Component

nucleoplasm (IEA,ISO)

nucleus (IBA,ISO)

PcG protein complex (ISO)

PRC1 complex (IBA,ISO)

Molecular Function

chromatin binding (IBA)

DNA binding (IEA)

histone binding (IBA)

protein binding (ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

histone modification pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	PRC1 complex diversity: where is it taking us?	Gil J and O'Loghlen A, Trends Cell Biol. 2014 Jul 22. pii: S0962-8924(14)00102-0. doi: 10.1016/j.tcb.2014.06.005.
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation
6.	Occupying chromatin: Polycomb mechanisms for getting to genomic targets, stopping transcriptional traffic, and staying put.	Simon JA and Kingston RE, Mol Cell. 2013 Mar 7;49(5):808-24. doi: 10.1016/j.molcel.2013.02.013.

Additional References at PubMed

PMID:12167701	PMID:16751776	PMID:17001316	PMID:19636380	PMID:21282530

Genomics

Comparative Map Data

Phc3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI		GRCr8
mRatBN7.2	2	112,408,709 - 112,483,719 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	112,408,531 - 112,476,540 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	119,066,709 - 119,130,894 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	117,179,274 - 117,243,458 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	111,882,251 - 111,946,375 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	116,028,735 - 116,103,227 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	116,028,781 - 116,096,045 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	135,723,966 - 135,798,433 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	116,831,190 - 116,895,396 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	116,772,507 - 116,840,332 (+)	NCBI
Celera	2	107,599,159 - 107,663,187 (+)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

PHC3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	170,087,584 - 170,181,733 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	170,086,732 - 170,181,749 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	169,805,372 - 169,899,521 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	171,288,062 - 171,382,231 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	171,297,359 - 171,382,218	NCBI
Celera	3	168,204,684 - 168,298,819 (-)	NCBI		Celera
Cytogenetic Map	3	q26.2	NCBI
HuRef	3	167,175,971 - 167,270,090 (-)	NCBI		HuRef
CHM1_1	3	169,768,808 - 169,862,971 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	172,872,255 - 172,966,417 (-)	NCBI		T2T-CHM13v2.0

Phc3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	30,953,444 - 31,023,628 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	30,953,520 - 31,023,564 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	30,899,295 - 30,969,479 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	30,899,371 - 30,969,415 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	30,798,217 - 30,868,337 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	31,097,687 - 31,160,279 (-)	NCBI		MGSCv36	mm8
Celera	3	30,811,260 - 30,881,515 (-)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	14.36	NCBI

Phc3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	329,215 - 403,168 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	329,215 - 403,191 (-)	NCBI	ChiLan1.0	ChiLan1.0

PHC3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	167,980,926 - 168,075,166 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	167,985,650 - 168,079,877 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	167,100,797 - 167,194,987 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	175,291,594 - 175,384,905 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	175,291,594 - 175,384,905 (-)	Ensembl	panpan1.1		panPan2

PHC3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	34,651,828 - 34,739,613 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	34,668,040 - 34,739,882 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	43,665,363 - 43,752,722 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	34,733,032 - 34,820,084 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	34,744,357 - 34,820,676 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	34,678,961 - 34,765,867 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	34,646,521 - 34,733,841 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	34,910,864 - 34,997,759 (-)	NCBI		UU_Cfam_GSD_1.0

Phc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	101,283,888 - 101,358,093 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936593	2,263,829 - 2,336,856 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936593	2,263,892 - 2,336,856 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PHC3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	108,776,220 - 108,883,572 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	108,791,675 - 108,883,620 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	117,553,499 - 117,628,878 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PHC3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	19,214,818 - 19,308,248 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	19,217,677 - 19,293,583 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	28,013,543 - 28,108,102 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Phc3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	48,153,414 - 48,238,279 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	48,144,767 - 48,258,807 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Phc3
280 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	51
Count of miRNA genes:	47
Interacting mature miRNAs:	50
Transcripts:	ENSRNOT00000066495
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	25413423	143657569	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	26917817	127469484	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	26917817	136917119	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	157142209	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	182042367	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	43154682	202446871	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
2293671	Bss44	Bone structure and strength QTL 44	10.97	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	2	43162366	148478373	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
1558648	Smcn1	Smooth muscle cell number QTL 1		0.039	blood vessel smooth muscle cell quantity (VT:0010525)	aorta smooth muscle cell count per unit vessel length (CMO:0001646)	2	59134147	127460910	Rat
61438	Cia7	Collagen induced arthritis QTL 7	4.6	0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	2	59324377	141596857	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
7411551	Bw131	Body weight QTL 131	29.6	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	2	67942638	112942638	Rat
1558653	Prcr1	Prostate cancer resistance QTL 1	5		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	2	72532993	157142209	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	76539322	150540526	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
2299162	Iddm32	Insulin dependent diabetes mellitus QTL 32	2.36		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	78665616	143657569	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
61392	Bp6	Blood pressure QTL 6	7		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	80270434	125270434	Rat
1598865	Bp296	Blood pressure QTL 296	2.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	81018907	126018907	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
1578772	Stresp14	Stress response QTL 14	5	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	2	82345893	130923501	Rat
7207808	Bmd89	Bone mineral density QTL 89	4.1		femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	2	88862519	133862519	Rat
2300165	Bmd49	Bone mineral density QTL 49	4.8	0.0001	lumbar vertebra mineral mass (VT:0010511)	bone mineral density (CMO:0001226)	2	88862519	133862519	Rat
2300170	Bmd45	Bone mineral density QTL 45	12.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
2300185	Bmd46	Bone mineral density QTL 46	8.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
1598862	Glom9	Glomerulus QTL 9	3.5		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	2	92337601	137337601	Rat
1598863	Cm65	Cardiac mass QTL 65	2.3		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	92337601	137337601	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	102803808	147803808	Rat
8662836	Vetf8	Vascular elastic tissue fragility QTL 8	0.66		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	104559726	149559726	Rat
1581552	Pur12	Proteinuria QTL 12	5.19	0.0009	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	2	112103657	148076632	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	112456140	212696837	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	112456140	212696837	Rat

Markers in Region

D2Rat171

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	112,456,140 - 112,456,288 (+)	MAPPER	mRatBN7.2
mRatBN7.2	9	67,703,258 - 67,703,293 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	116,075,644 - 116,075,793	NCBI	Rnor6.0
Rnor_5.0	2	135,770,850 - 135,770,999	UniSTS	Rnor5.0
RGSC_v3.4	2	116,874,923 - 116,875,072	UniSTS	RGSC3.4
RGSC_v3.4	2	116,874,922 - 116,875,068	RGD	RGSC3.4
RGSC_v3.1	2	116,819,884 - 116,820,030	RGD
Celera	2	107,642,786 - 107,642,935	UniSTS
RH 3.4 Map	2	715.9	UniSTS
RH 3.4 Map	2	715.9	RGD
SHRSP x BN Map	2	39.8998	RGD
SHRSP x BN Map	2	39.8998	UniSTS
Cytogenetic Map	2	q24	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		8	20	4	18	4	1	1	66	25	23	11	1
Low	3	35	37	37	1	37	7	10	8	10	18		7
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232230	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001836455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005500282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ626627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000066495 ⟹ ENSRNOP00000063002

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	112,412,408 - 112,476,540 (+)	Ensembl
Rnor_6.0 Ensembl	2	116,032,455 - 116,096,045 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000089477 ⟹ ENSRNOP00000072169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	112,408,531 - 112,476,540 (+)	Ensembl
Rnor_6.0 Ensembl	2	116,028,781 - 116,095,704 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000109697 ⟹ ENSRNOP00000096050

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	112,411,543 - 112,476,540 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000110653 ⟹ ENSRNOP00000078977

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	112,411,543 - 112,476,540 (+)	Ensembl

RefSeq Acc Id:

NM_001107662 ⟹ NP_001101132

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,340,885 - 114,405,019 (+)	NCBI
mRatBN7.2	2	112,412,408 - 112,476,540 (+)	NCBI
Rnor_6.0	2	116,032,455 - 116,096,045 (+)	NCBI
Rnor_5.0	2	135,723,966 - 135,798,433 (+)	NCBI
RGSC_v3.4	2	116,831,190 - 116,895,396 (+)	RGD
Celera	2	107,599,159 - 107,663,187 (+)	RGD

Sequence:

show sequence

CTACCAGATTTAAAGACCACAGTACAGCTATGGAGAGTGAGCCCAGCTCTGGAACGTCTGTGTC
AACAACAGCCAGCAGCACCACCACCACCACCATCACCACATCCTCCTCCCGAATGCAGCAGCCA
CAGATCTCTGTCTACAGTGGGTCAGACCGACATGCTGTCCAGGTAATTCAGCAGGCCCTGCATC
GGCCCCCCAGCTCGGCAGCTCAGTACCTGCAGCAGATGTACGCAGCGCAGCAGCAGCACCTCAT
GCTGCACACGGCCGCCCTTCAGCAGCAGCATCTGAGCAGCTCCCAGCTCCAGAGCCTGGCGGCC
GTGCAGTTTGTCCAGTGGAAGACCATCTACATCCCCCACAGGCAGTGTTACACAACAGTCAAGT
ATGTCCCAGACATCTATCAACCTCTCCACTTCGCCGACACCTGCTCAGCTGATGAGCCGCTCGC
AGGCCTCCAGCTCGACCAGTGGCAGCATTACCCAGCAGACCATGCTCCTAGGGAGCACCTCGCC
CACCCTCACAGCCAGCCAGGCCCAAATGTATCTCCGAGCTCAAATGGTTCAGAATTTAACATTA
CGCAGCCAGAAGTTGGGTGTCTTATCTAGCTCACAGAATGGCCCACCAAAAAGTGCTGGTCAAA
CCCAGTCCTTGACAATTTGCCATAATAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGA
CCCTTCTCCAGAGAGCAAGAAGGGCGGAAGTCCAGGTCTGGAATCTCGGAGCACAGCCGTCACA
CGGACATCAAGCATTCACCAGTTGATAGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTC
TAATCAAACATCAACAGATTCCTCTCCATTCACCACCTCCTAAAGTTTCCCATCATCAGCTGAT
ATTACAACAGCAACAACAGCAAATTCAGCCAATCACCCTTCAGAGTCCAAGTCAAGATCCACCC
CCATCCCAGCACTGTATCCCACTCCCCAACCATGGCCTTTCTCCGGCTTCCAGTAATGCCCAGT
CACAGCAGCATTGCTCACCAATTCAGAGCCATCCCCCGCCTTTAACTGTGTCTCCTAGCCAGGC
CCAGTCTGCACAGCAGTCTGTAGTGGTGTCTCCTCCCCCCGCTCATTCCCCAAGCCAGTCTCCT
ACCATCATTATCCATCCACAAGCACTTGTCCAGCCACACCCTCTTGTGTCTTCAGCTCTTCACA
CAGGGCCAAACTTGCAGCAGGCCACTGCTGATCAGGTACAATCCACAGCACAGCTGAACCTCCC
GTCCCATCTTCCACTTCCAGCATCCCCTGTAGTACACATTGGCCCCGTCCAGCAGTCTGCCTTG
GTGTCCCCTGGTCAGCAGATAGTGTCCCCAACATCACACCAGCAATATTCAACCCTACAGTCAT
CTCCAATTCCGATCGCAACCCCTCCACAGATGTCGGCATCTCCTCCAGCTCAGATCCCACCACT
GCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTATCCCAGGGCCAGGTTTTG
GTGCAGAATGCTTTGGTGTCAGAAGAGGAGCTGCCTGCTGCAGAAGCTTTGGTCCAGTTGCCAT
TTCAGACTCTTCCTCCTCCACAGACCGTTGCGGTAAACCTACAAGTACAGCCGCCAGCACCTGT
TGATCCACCAGTGGTTTATCAGGTAGAAGATGTGTGCGAGGAAGAAAGGCCAGAGGAGTCCGAT
GAGTGTGCACGGATGGACCGAACACCGCCGCCCCCCACTTTGTCTCCAGCAGCTATCACTGTGG
GGAGAGGAGAGGATTTGACATCTGAGCATCCTTTGTTAGAGCAAGTAGAGTTGCCTGCCGTGGC
CTCAGTCAGTGCTTCTGTGATCAAGTCTCCATCAGACCCAACCCATGTCTCTGCTCCTGCACCT
CCACTCTTAATGCCCGCTGCCTCCACAAGGAGCAGCAGCACTTCTCTGGCCAGCAGCACCCCCA
GCCTGGAAAACAAGCCTCCACAGGCTATCGTGAAGCCACAGATTCTGACCCACGTTATAGAAGG
TTTTGTGATTCAGGAGGGACTGGAGCCGTTTCCTGTGAGTCGTTCATCTTTGCTGATAGAACAA
CCTGTGAAAAAGAGGCCTCTTTTGGATAATCAGGTGGTAAATTCGGTGTGTGTTCAGCCAGAGC
TACAGAATAACACAAAGCATGCAGATAACTCGTCCGACACAGAGATGGAGGACATGATTGCTGA
AGAGACATTGGAAGAAATGGATAGTGAGTTACTCAAGTGTGAATTCTGTGGAAAAATGGGATAT
CCTAATGAATTTTTACGATCAAAACGATTCTGTACTATGTCATGTGCCAAAAGGTACAACGTTA
GCTGTTCTAAAAAGTTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCA
TCGGGGCCGTCGTCCAAGTGGCCCTGAAGGGGCAGCGAGAGAACATATCCTTAGGCAGCTTCCA
ATTACTTATCCATCTGCAGAAGAAGACTTGGCCTCTCGTGACGATCCTGTGCCGTCTGCTATGA
CGACTCGCCTGCGCAGGCAGAGTGAGCGGGAAAGAGAACGCGAACTTCGCGACGTGAGGATTAG
GAAAATGCCTGAGAACAGCGACTTGCTCCCAGTCGCACAGACGGAGCCCTCCATATGGACGGTC
GATGACGTCTGGGCCTTCATCCACTCTTTGCCTGGCTGTCAGGACGTTGCCGATGAGTTCAGGG
CACAGGAGATTGATGGGCAGGCACTGCTCCTGCTAAAAGAAGACCATCTCATGAGCACAATGAA
CATGAAGCTGGGCCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTGAAGGACTCCTAACAG
CAGCCAGGCTTTGTCTCAGTCCATTCCTCTTTCTCGGTGAAGGTAAAGCCTGATGGGGCTGAGA
GCATCGGACTGATGGGGGAAGGCCAAGTGCATTGGGACCGCCACGGCCAGTGCCGACATTTCTC
TTCAGATGCCCTAACTCATCTTATGTTCTCATAATTAGCGACCGTCGGTGGTGTTAATTTTACC
AGTTACAGACTACACTGAAAGACTTGTTACAGAGGCCCATATTTTTCAAAGAAACATGTTATAC
TAGATAATTTTTTAAAGGTAATGTTTATCATTAATATAAAAGAATCCTTTTAAAAATAATTATT
GATTTACACTCCCCCTCCTTTAATTCTCTTTTCTTATACATTTGTCTACCCTGTTAGTTTTCTA
AATGTTGTCATAGAGATATAGGATAATTTAGGAGCCCATTGACAGAATTGAATGCAATGAAATA
GCAGTATGTTTTTAAAAGTATCTTCCACAGATGCTTTGGTTGTGAAATGGGATTGTGTTTTAGC
ATAAGGAGTATTTTTGAAGGTTC

hide sequence

RefSeq Acc Id:

XM_006232226 ⟹ XP_006232288

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI
mRatBN7.2	2	112,408,709 - 112,483,719 (+)	NCBI
Rnor_6.0	2	116,028,735 - 116,103,227 (+)	NCBI
Rnor_5.0	2	135,723,966 - 135,798,433 (+)	NCBI

Sequence:

show sequence

CTTAACCCCCCCCCCAGATCCCGCCCCACTGCTCTTGCAGGGGAAAGAGGAGGCGCATGCGCAC
CCCGTGTTAGTGATGGAGGAGAGAAGATGGCGGAAGCGGAATTTAAAGACCACAGTACAGCTAT
GGAGAGTGAGCCCAGCTCTGGAACGTCTGTGTCAACAACAGCCAGCAGCACCACCACCACCACC
ATCACCACATCCTCCTCCCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGGTCAGACCGAC
ATGCTGTCCAGGTAATTCAGCAGGCCCTGCATCGGCCCCCCAGCTCGGCAGCTCAGTACCTGCA
GCAGATGTACGCAGCGCAGCAGCAGCACCTCATGCTGCACACGGCCGCCCTTCAGCAGCAGCAT
CTGAGCAGCTCCCAGCTCCAGAGCCTGGCGGCCGTGCAGGCCAGTTTGTCCAGTGGAAGACCAT
CTACATCCCCCACAGGCAGTGTTACACAACAGTCAAGTATGTCCCAGACATCTATCAACCTCTC
CACTTCGCCGACACCTGCTCAGCTGATGAGCCGCTCGCAGGCCTCCAGCTCGACCAGTGGCAGC
ATTACCCAGCAGACCATGCTCCTAGGGAGCACCTCGCCCACCCTCACAGCCAGCCAGGCCCAAA
TGTATCTCCGAGCTCAAATGCTGATTTTCACACCTGCTACCACTGTGGCTGCTGTACAGTCTGA
CATCCCTGTTGTCTCGTCGTCACCGTCACCTTCCTGTCAGTCTGCAGCTGCTCAGGTTCAGAAT
TTAACATTACGCAGCCAGAAGTTGGGTGTCTTATCTAGCTCACAGAATGGCCCACCAAAAAGTG
CTGGTCAAACCCAGTCCTTGACAATTTGCCATAATAAAACAACAGTGACCAGTTCTAAAATCAG
CCAACGAGACCCTTCTCCAGAGAGCAAGAAGGGCGGAAGTCCAGGTCTGGAATCTCGGAGCACA
GCCGTCACACGGACATCAAGCATTCACCAGTTGATAGCACCAGCTTCATATTCTCCAATTCAGC
CTCATTCTCTAATCAAACATCAACAGATTCCTCTCCATTCACCACCTCCTAAAGTTTCCCATCA
TCAGCTGATATTACAACAGCAACAACAGCAAATTCAGCCAATCACCCTTCAGAGTCCAAGTCAA
GATCCACCCCCATCCCAGCACTGTATCCCACTCCCCAACCATGGCCTTTCTCCGGCTTCCAGTA
ATGCCCAGTCACAGCAGCATTGCTCACCAATTCAGAGCCATCCCCCGCCTTTAACTGTGTCTCC
TAGCCAGGCCCAGTCTGCACAGCAGTCTGTAGTGGTGTCTCCTCCCCCCGCTCATTCCCCAAGC
CAGTCTCCTACCATCATTATCCATCCACAAGCACTTGTCCAGCCACACCCTCTTGTGTCTTCAG
CTCTTCACACAGGGCCAAACTTGCAGCAGGCCACTGCTGATCAGGTACAATCCACAGCACAGCT
GAACCTCCCGTCCCATCTTCCACTTCCAGCATCCCCTGTAGTACACATTGGCCCCGTCCAGCAG
TCTGCCTTGGTGTCCCCTGGTCAGCAGATAGTGTCCCCAACATCACACCAGCAATATTCAACCC
TACAGTCATCTCCAATTCCGATCGCAACCCCTCCACAGATGTCGGCATCTCCTCCAGCTCAGAT
CCCACCACTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTATCCCAGGGC
CAGGTTTTGGTGCAGAATGCTTTGGTGTCAGAAGAGGAGCTGCCTGCTGCAGAAGCTTTGGTCC
AGTTGCCATTTCAGACTCTTCCTCCTCCACAGACCGTTGCGGTAAACCTACAAGTACAGCCGCC
AGCACCTGTTGATCCACCAGTGGGAATGCATTTGAACCAGTGTCATCTGCACAAAGTTTTTTCT
CTTAAGGTTTATCAGGTAGAAGATGTGTGCGAGGAAGAAAGGCCAGAGGAGTCCGATGAGTGTG
CACGGATGGACCGAACACCGCCGCCCCCCACTTTGTCTCCAGCAGCTATCACTGTGGGGAGAGG
AGAGGATTTGACATCTGAGCATCCTTTGTTAGAGCAAGTAGAGTTGCCTGCCGTGGCCTCAGTC
AGTGCTTCTGTGATCAAGTCTCCATCAGACCCAACCCATGTCTCTGCTCCTGCACCTCCACTCT
TAATGCCCGCTGCCTCCACAAGGAGCAGCAGCACTTCTCTGGCCAGCAGCACCCCCAGCCTGGA
AAACAAGCCTCCACAGGCTATCGTGAAGCCACAGATTCTGACCCACGTTATAGAAGGTTTTGTG
ATTCAGGAGGGACTGGAGCCGTTTCCTGTGAGTCGTTCATCTTTGCTGATAGAACAACCTGTGA
AAAAGAGGCCTCTTTTGGATAATCAGGTGGTAAATTCGGTGTGTGTTCAGCCAGAGCTACAGAA
TAACACAAAGCATGCAGATAACTCGTCCGACACAGAGATGGAGGACATGATTGCTGAAGAGACA
TTGGAAGAAATGGATAGTGAGTTACTCAAGTGTGAATTCTGTGGAAAAATGGGATATCCTAATG
AATTTTTACGATCAAAACGATTCTGTACTATGTCATGTGCCAAAAGGTACAACGTTAGCTGTTC
TAAAAAGTTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCATCGGGGC
CGTCGTCCAAGTGGCCCTGAAGGGGCAGCGAGAGAACATATCCTTAGGCAGCTTCCAATTACTT
ATCCATCTGCAGAAGAAGACTTGGCCTCTCGTGACGATCCTGTGCCGTCTGCTATGACGACTCG
CCTGCGCAGGCAGAGTGAGCGGGAAAGAGAACGCGAACTTCGCGACGTGAGGATTAGGAAAATG
CCTGAGAACAGCGACTTGCTCCCAGTCGCACAGACGGAGCCCTCCATATGGACGGTCGATGACG
TCTGGGCCTTCATCCACTCTTTGCCTGGCTGTCAGGACGTTGCCGATGAGTTCAGGGCACAGGA
GATTGATGGGCAGGCACTGCTCCTGCTAAAAGAAGACCATCTCATGAGCACAATGAACATGAAG
CTGGGCCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTGAAGGACTCCTAACAGCAGCCAG
GCTTTGTCTCAGTCCATTCCTCTTTCTCGGTGAAGGTAAAGCCTGATGGGGCTGAGAGCATCGG
ACTGATGGGGGAAGGCCAAGTGCATTGGGACCGCCACGGCCAGTGCCGACATTTCTCTTCAGAT
GCCCTAACTCATCTTATGTTCTCATAATTAGCGACCGTCGGTGGTGTTAATTTTACCAGTTACA
GACTACACTGAAAGACTTGTTACAGAGGCCCATATTTTTCAAAGAAACATGTTATACTAGATAA
TTTTTTAAAGGTAATGTTTATCATTAATATAAAAGAATCCTTTTAAAAATAATTATTGATTTAC
ACTCCCCCTCCTTTAATTCTCTTTTCTTATACATTTGTCTACCCTGTTAGTTTTCTAAATGTTG
TCATAGAGATATAGGATAATTTAGGAGCCCATTGACAGAATTGAATGCAATGAAATAGCAGTAT
GTTTTTAAAAGTATCTTCCACAGATGCTTTGGTTGTGAAATGGGATTGTGTTTTAGCATAAGGA
GTATTTTTGAAGGTTCTCAAGAGTCTCGTTCTAGCCTTTGCCCAGATTGTCACAACTGACAGTT
TTCCTCCTGGCTTGTACCTGAGAACAGTCGTTCTCTGTGACAGCATGTCCTCCAGGGGACAGCC
GGCAGTTGCTACACACACTCTGGCTGCCACAGTTGGGGCTGAGTTTTGGGGAGGGTTGCTACAG
GAATTGAGGCATGGCAGCCAGCTGGAGATGATGCTGACTATCCTCCTGCACATAGGATGTCCCT
CTGTCACCAAGAATGATGTGCTATAGATGGCAGTGGTGCCATGGTTAAGAAGCCTGGGCGAGCA
AAGTACTGTGTGTTGCTCTTTTCACCGCAGGGACATACATAAAAGATGGGCCGGGCCAGGAGGA
TGGACAGTGAAGGATCAGCTAAGTGGCACTAGAGCTCTGCAGACGTAGAGTTTAGTTTTACCGT
ATACTAGAAAGGAAAAGAAACCCATAAACTTGGCCTATAAAGCTAGCCCAGGACCTCAGGTCAT
GGGCCTCTGGTGTGGCCCCTCTTCCTGACTCTGCTCCCATGCACTGAAAGTGCTCCATGCAGTC
ACGCCTCAGAGCTTCTTCAGCAGCCGCATGGCAGTGGAGATGGGAGTCCCTTGAAGCAGCCCTG
CTGCGTCTGGCTAGAATGCACAGTTCTTTCTCCCTTACTAAGGCTTTGGATTCTTCCCACAAAG
TACTTAAAGTGATTTAATCAAAAGTTTTCATTCAGGGTTGGGGATTTAGCTCAGTGGTAGAGCG
CTTGCCTAGCAAGCGCAAGGTCCTGGGTTCGGTCCCCAGCTCCGGAAAAAAAAAAAAAAGGAAA
AAAAGTTTTCATTCATTCAACAGTTTTCTGTTAGGACATTAAGCCAAATCTTCCTGTGGATGCT
CTGAAATCTTTCTAGTGCTGGGCATCAAAAGATTTGCTGATTTTGTTTGCTTTCTCTATCTTTC
ACCACGTTTGAGAAATCTGAACAGTTGGAGGGGCATGTACGTATCCTTGGCACAGACATAAGAG
ACAGCAAGAGTCTGAGCTCTGTCATCTTTCCAGCACTTTTCAGAGACTGTGTTGGGTTAGTAGA
AGACTAAAAGATGTCGCAGACATCGCAGATAAATTTATCTTTTGGCTCTGTGTACATTAGAAAA
TGTTGGTTATTTTTATACAAAATATAGCGGATAATTTTTTTATTCTTTAGATGCCTCTTGTTTG
AATGTCTGCTTTGTGAGATTGTTGGTGTAGTTTTAGGAGGTGTTCACTAGCTCTTGTGGACTCA
GTGTAAGTGTCTGAGGCTCCTGTTTCCGACTACAGTTATAGTCTCCTTGTTACTGTACAGCCAG
CTTCATTTATTAGTACTGAGTCATCATGGCCGAGTGTCATGGCCGCTCCTCCTCCTCCTCCTCC
TAACCCAGGCTGTGCAGCACTAGGAGATTGATGGCTGCCTCAGCAATAAGGCCTCCCTCCCACA
GTGCTTGCACATAGCCTTTGAGGCACTAACTCTGCACTTGTACTAACGCCAGCTCATCGTGTGC
GTATGAGAAACCTGCGCCTAGCACTGTCCTTAACGCCCTAAACAGTTTACACGAGGGGTCTCTC
CTGGAGGATGCCTTCTTGCCCTTCATCTTAGAAGTAGTCCAGATCTTCTGTTGTCTGCTCTTAA
ATTTAACTAACAAAAACACTTTTTTCTTACAAGGCGGTTATTTTATTTAGAAGTGGCTCGTTTG
CTGTTGGGTAGCTTTCCCATCGCTGTAGGTGCTTCTTTCTAGGTAATTTTCAGTCGTACTAATT
TGAAAGCTTCAATTACGTGATGTGTTTCCCTGTCTCCCCAGCATTAAGCTGTCAGGGTGACACA
GACAGGAAGAATGCTGGCTTCATCTCCTTTCATATTACTAAGCACTTAGTAACTTTCTTGGAGG
GAAAAATATGACAAGCAGGAAGGGAACATGGCTTCTTCCTAGTTTTGCTTCTTGAGTTTGCCTT
TCCTGACTTGAAACCCTTCAACCACTGTGGGACACACTTTTCACATGTTACTTAAGTTCTGTGT
TCTTAGGAAAATAAACAGCTGGCTTGTAAAGGTTACTTTATATGACAACTTAGACACGCTTTTC
ATAGACACATGTAAGGCACATGGCACAGCTTCATCAGCACAGCAGAGACACAGCTTCAGTGACA
GTGACTGATGTGACAGTGACACAGTGACACACAGTGACAGTGACAGTCACTCCCGCAGAACTGT
GAAGTCTAGGTTAAAGGGCTGTCATCTGGGAGTAGAGGTAACAGATCAAGAGGAAAGCGTGTTA
GTGAGGCATCTGGAGAATGCAGGGCAACGGGGACCTCCTCCTCTGCTCAGTTCATCATTACAGC
CCTGAATGATTCATGATTTACCTGAGTAAAAAGAAGGGATTTTCTGTTTCTCCTTTGTTTCTTG
TGTTGGGAGAGTGGTGTGTGAGACTGTATCGTTATCATGACTTTGAATAACCATGGAGTCAGTC
TTCATCTAGTCAGTGCAACATTTAGTCACATATCGATTTATAAACACAAATCTTGGACTGAAAT
CCTTCACAGGACCCATGTTCTCATAAGCTCGTTAGATTGTGCATCTCACAGCTGTCTCCAGTAC
CTGAACTCTCTGACTGCTAATACTCTTAAAGCATCTCAGACATGTTCTCAGCTAGGGAGCTGGC
TACATGCTGTAGTCTGAAGACTTGGGGATGCTAGCAACACTTGGCTGCCGACTGCTACCGTCAG
CTAGCATGGGATGGCCTCACCTCATTTCCCACACTGAGCCCCATCAAGCTCCAACCCCACCTCC
AATAAACTGCACAGACTTCTTCTTAGTTCTTTACTGGGGCTTGGGTAGCATCCTGACTTGGAGA
GCTTCAGGCTTTTGTGATGGACAGACCAGTTGTATTTCAATGGAAGTCTTGTCCATCCATGAAC
ATCCTTTCCTAGTTTCTTGAGTATCATGTCTGACTGTGTGACTCATTCCTTGAAGGCTTTTTGG
GCATGGGGGGAAGTAGAGTAAGAGACAGATAGGAAGATGATATTGCTAGCTAAATGAAGACATT
AGCACGATGGTGGTCCTCAGTCACTTAGAATAATCCTTGGTGATGGATGGTTGGACAGGATGTT
AGTAGTTTGGTTTGTCAGTACTCGGGATTGAGTCAGGGCCTCATTCTCCACCTCTGAGATTGCA
CACTGTAGTTTTTGCTTGTTTGCCTGGACTAACCTGGAATTGTGGTCCTCTGACCTTCTCTCAA
GTGCTGGAATTTAACATCTGTGCTACCATGCCAGACCTAGCTCTTGTGGTTTTCAATTGTCAAG
ATTTGGTTGTAATCAAATTAGCTATTTCTCTTTATCACCTGACCTGCTCTGAAGAGTGCTGGTA
TTCCTAGTACCACTGGCACCCAGGTTGAGGAATCCTGGATTTTTGAAGATGATAATCAGAGGGA
GAGAATCTGTCAAAATGTAGATTTTGTTTGTTATGATTGAGTGGCCAGAATGCAGAGGCATTTC
CAGTCAGATATGACAGCTGACTCAGTATTGCTGCCAGTCTTAAGGGAAGGCACTGTAGGACAGT
GTTGTGTCCCATTCTGAGCCTGGTAACTGCAGGTTTCTCCTGACTGGTGGACTCCAGTAAGCAC
AAGCCTGCCTGTTTTCTTGGGGTAAAGCAGAATGTATCATGACATGAACTCTTTTAACTCACAG
TCAGCAATACTGATATTATCACTCCATTTAGGATATTTTATTTTATCTCAGAGACGGGTTTTGA
GTTTAGATGAGTACAAATAAGTACTCAGAACAGTAAATGTCTTTTGTTATTCAAATTTAATTTT
TAACTCATTGAACCAACACTTAAGGAATTCTCTGGGAAGAGATTTCTGGTGTTAGATTATAAAA
TGCATTGCCATATAGTTTAGAGTTGAAATAAAAGCTGTTTTCCAATTAAAAATGCTGCAAATTC
TGCCATTTTAAAAAGTGGCTGAAATAGTGACTGAAGTAGTAGGCTTATCAGCTGTACACGCAGT
TTTACAGTTATGTCTCCTTAACATTGTACTAAGAGAAAACTTTTTCTTTTGGAAAGTTATAAGA
TCTGAGTTTATCTCCACGTATTACTACCATCGTGTTCCAGAGAAAGCCATCAGGAGGCCCCTGC
CCTCTGTTGGCACACACAGCTTCCCTAGAGCAGTCTCATTTGCACACTCTGGCAAGGGCCATAC
CTAAGGGAAAGTGTTTCCACAAGGGCTTCCCTTTCTTTCTCCTTTGGCAGCTTGTGGACGTTTT
ATTTTATTTAAAATACAATTTGAATAAAATGTTAGGCACTAAACGAGCTTCTATATAACACTTT
ATATTTTAGGCAAAGGCCTTTCTGTTGCTTTTCAAGTGTAAACCTACTGCTGTCTATGATATTC
CTGATATTGGGCATAAATCTATAGAATGAGAAAATAGTATGTAATGAATGAACTTTAATTAAAA
ATCAGTATAAACTTAAAACATCCCTATGCTAGCATGGCATGGTTTTAATGACGTGTAAGGGATG
TAGGTCGGTCCTTCTTGCTGTCTGACTTAGTCCCAGCCATCGCCCTAGGTGTTCATAGCACCTT
TGCTTTTGTGCTTCCTGGGATACATCAGTGTTTCGTGGACCTTTCTCTGACAGTGGTGCAAGAA
CGTCATGGAAGGATACATGAACCCACTGAGGAAGGAAGGGACTTTTTAAATTTTGCCTCAAGTA
AACTAAGTGTGTACAGTGTTTCTCCTTATACATGATGCTGTGTTAGTGTTTGGGTAGTATTACA
GCGAGAAGATGGAGAGGAAGCGGTGAGGCTTGGAGACGGCAGGCCAGCCTGTGACACGCCGGGC
AGCTATTTGGCTTTGTCATTTCAATGGACGGTGTGACTGATACCTGTACTATTAAATAGGCTGA
TTTGGTTTTTTTTTTGGCCTAAATCATTATTGAAGAAATATCCTCCCCCAGCTTTAAAGTTACA
GTCCTGAGCTACATAATTGGGATTACCACTGGGCTGACTGAATGAATGCCCTGCCACCCGGGAA
CTGGGGTTTATGACGTCCGAGGGCTCAGTCACATCACCACTCTCGTCCTTCCCATCAGTGGACC
ATCTCCTTGACTGTTGACAACAGTCAGACTACCTGCCGTGACCGACTGCCGTGAGACTGTTGTG
ACAGCCATTGTCAGGACCGGTCCTGTACATGGTGTATGGGTGGCAGGATACAAGAAGTCGATGT
GGAATCATTGTGCATTTTTATTTGTAAAAGTTTATATCCAGTATTGACAGTGGAACAGTTTGGA
ACAGTATTGATATTTGGAACAGTTTTCCAAAACAGAATCATCTGAAATGAGGCAGAGACCGAGA
CACTACTGCGGCCTTCCCCACAGTGCTGAGTGTACTATAGTGCATTAGAGACGGCCACTTCTCA
GACAGGGAAGACCCAGAAAGGGACTGCACTGCACCGGGAATGAGGAACTGGTGACAGAAAGTAG
TTCCTAGCTGGGTGGTGGCTCATGCCTTTAATCCCAGCCTTGGGAGGCAAAGGCAGGCGGATCT
TTGTGAGATCGAAGCTAGTCTGGTCTACAGAGCAAGTTCTAGGACAGCCAGGGCTACATAGAGA
AACTCTGTCTCAAAAGCCACCACCACTACCAACAAAAAGCAGACCCCGCTGCACTGACACGTAT
TTAAGGAGTGAAGATGGAGTTAGAGTCAGTTTGATGGGGTGAATCCCATATCCGCCTGGGATTC
TGGGAGTCAGGCCGCAAGTCTTGCTTTAAATGCTAACATCTGTTGTTACTCACATTCTCTATAA
AGATATAAAATTATATTTTAAAGACTTTTATGTATCAGAGCTATAGGTTTTTAAAGTGGAGAAA
TGCCCAAATAAATTGTTAAATTACAATATATAATAGGTGCTTTCAAATTAAGGTTTTTTAAAGT
TATAATAATCTAAATAGCCCACTAATCTGATCTTTGTAAATTGTCCCACGATTCTGGTTACTCT
TAAGGTGTTTTTTGAGTTTTTGAAAGTTTACCTAGGTTGTACAATATCTTCCTGTGCTGTTTAG
ATCTCTGTTGCATACATGCTGTTCTCGTGTCTGTGCTCTTAGAGCTTTAGAGGTCAGCTGAAAA
TACGGAGTGCAGCTCTTGTGTATGATCCCACACTGATCGAGTAGACTGCCAGTCACCTCATTCA
GAACATAGGTCTGGGTTTGTACAGTAGGGGACTAAAAATCAAAGTTCAGAAACTCACGAAGTGT
GGGGATTGTGCTAGAAATGAGACTGTGCGTTGCAGACAGCCATGCACGGGGTAGCTCTGACTTC
AAGCCTCTTGGACTGGCTTAGAATGCTTTGCCTTCTCACCACTTAAAATTTGTTTCACAAAGGC
AGGTTGCTGGGACTAATTATTTTTTAATGTTTTAAACCCATTTTAAAAAGTCTTCCTTTTGGTT
TTGACCATTGTTCTAAAATCAAAGTTTTACAATAAAAAAAAAAAATCCCAAAAGACGATTCATC
AAGGAAAAGAGCATAACCAAGGGGGAAAGAAACCATGTTTTAATCTTAAAGAAAGCCAATATGA
AGGTGGTAATAGATGTGTCTTACAGTGGACGCTGTATTAAGAGTCTTCCTCACAGGAAACAACA
GTTCTAGCGCCCGTGGCATAGATTCCTAGATGGCGCCCAAGCTACAGTTACACAGTGTATGACC
TAAAATGAAGTTAATTTTGCATTATAAGAGCACACCGTTATCTATGTAAAAAGTGTTCATTTGA
TGTATTTTTTTAAGAAGAGATAAAGCACTTTCATATTAAGTAGCATGTGTGTGAATTTTAGACT
TCCTATGTGTGTCTAGTCAGTGGAATTAAAGGAGCGTCAGATGTTTGCTGGCGATGTTAACTGC
TAATGGAAGCACTTTCTCTGCTGCTTAGCCTCGCTTGGATTGCACCTTTGTTACTGCACACGTT
CACAGACAGTATTGTAACATGGCTTCGAGTGGGTCTGGGCGGACGACTAGTGTTGGGCCTACAG
GATCTTCTATTTATGTCGTTTATATTACGATAATATATTGTAGACCAGTTGTAACTTCAGTTCT
TTACAAATAAAAGCCTGACTGGTTATTGAATGTTCATTTCTTTAAGCCTTTGAGAGACGGGGAA
ATCTAATAAAGACCTTAATGGAGGGCTGAA

hide sequence

RefSeq Acc Id:

XM_006232227 ⟹ XP_006232289

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI
mRatBN7.2	2	112,408,709 - 112,483,719 (+)	NCBI
Rnor_6.0	2	116,028,735 - 116,103,227 (+)	NCBI
Rnor_5.0	2	135,723,966 - 135,798,433 (+)	NCBI

Sequence:

show sequence

CTTAACCCCCCCCCCAGATCCCGCCCCACTGCTCTTGCAGGGGAAAGAGGAGGCGCATGCGCAC
CCCGTGTTAGTGATGGAGGAGAGAAGATGGCGGAAGCGGAATTTAAAGACCACAGTACAGCTAT
GGAGAGTGAGCCCAGCTCTGGAACGTCTGTGTCAACAACAGCCAGCAGCACCACCACCACCACC
ATCACCACATCCTCCTCCCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGGTCAGACCGAC
ATGCTGTCCAGGTAATTCAGCAGGCCCTGCATCGGCCCCCCAGCTCGGCAGCTCAGTACCTGCA
GCAGATGTACGCAGCGCAGCAGCAGCACCTCATGCTGCACACGGCCGCCCTTCAGCAGCAGCAT
CTGAGCAGCTCCCAGCTCCAGAGCCTGGCGGCCGTGCAGGCCAGTTTGTCCAGTGGAAGACCAT
CTACATCCCCCACAGGCAGTGTTACACAACAGTCAAGTATGTCCCAGACATCTATCAACCTCTC
CACTTCGCCGACACCTGCTCAGCTGATGAGCCGCTCGCAGGCCTCCAGCTCGACCAGTGGCAGC
ATTACCCAGCAGACCATGCTCCTAGGGAGCACCTCGCCCACCCTCACAGCCAGCCAGGCCCAAA
TGTATCTCCGAGCTCAAATGCTGATTTTCACACCTGCTACCACTGTGGCTGCTGTACAGTCTGA
CATCCCTGTTGTCTCGTCGTCACCGTCACCTTCCTGTCAGTCTGCAGCTGCTCAGGTTCAGAAT
TTAACATTACGCAGCCAGAAGTTGGGTGTCTTATCTAGCTCACAGAATGGCCCACCAAAAAGTG
CTGGTCAAACCCAGTCCTTGACAATTTGCCATAATAAAACAACAGTGACCAGTTCTAAAATCAG
CCAACGAGACCCTTCTCCAGAGAGCAAGAAGGGCGGAAGTCCAGGTCTGGAATCTCGGAGCACA
GCCGTCACACGGACATCAAGCATTCACCAGTTGATAGCACCAGCTTCATATTCTCCAATTCAGC
CTCATTCTCTAATCAAACATCAACAGATTCCTCTCCATTCACCACCTCCTAAAGTTTCCCATCA
TCAGCTGATATTACAACAGCAACAACAGCAAATTCAGCCAATCACCCTTCAGAGTCCAAGTCAA
GATCCACCCCCATCCCAGCACTGTATCCCACTCCCCAACCATGGCCTTTCTCCGGCTTCCAGTA
ATGCCCAGTCACAGCAGCATTGCTCACCAATTCAGAGCCATCCCCCGCCTTTAACTGTGTCTCC
TAGCCAGGCCCAGTCTGCACAGCAGTCTGTAGTGGTGTCTCCTCCCCCCGCTCATTCCCCAAGC
CAGTCTCCTACCATCATTATCCATCCACAAGCACTTGTCCAGCCACACCCTCTTGTGTCTTCAG
CTCTTCACACAGGGCCAAACTTGCAGCAGGCCACTGCTGATCAGGTACAATCCACAGCACAGCT
GAACCTCCCGTCCCATCTTCCACTTCCAGCATCCCCTGTAGTACACATTGGCCCCGTCCAGCAG
TCTGCCTTGGTGTCCCCTGGTCAGCAGATAGTGTCCCCAACATCACACCAGCAATATTCAACCC
TACAGTCATCTCCAATTCCGATCGCAACCCCTCCACAGATGTCGGCATCTCCTCCAGCTCAGAT
CCCACCACTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTATCCCAGGGC
CAGGTTTTGGTGCAGAATGCTTTGGTGTCAGAAGAGGAGCTGCCTGCTGCAGAAGCTTTGGTCC
AGTTGCCATTTCAGACTCTTCCTCCTCCACAGACCGTTGCGGTAAACCTACAAGTACAGCCGCC
AGCACCTGTTGATCCACCAGTGGTTTATCAGGTAGAAGATGTGTGCGAGGAAGAAAGGCCAGAG
GAGTCCGATGAGTGTGCACGGATGGACCGAACACCGCCGCCCCCCACTTTGTCTCCAGCAGCTA
TCACTGTGGGGAGAGGAGAGGATTTGACATCTGAGCATCCTTTGTTAGAGCAAGTAGAGTTGCC
TGCCGTGGCCTCAGTCAGTGCTTCTGTGATCAAGTCTCCATCAGACCCAACCCATGTCTCTGCT
CCTGCACCTCCACTCTTAATGCCCGCTGCCTCCACAAGGAGCAGCAGCACTTCTCTGGCCAGCA
GCACCCCCAGCCTGGAAAACAAGCCTCCACAGGCTATCGTGAAGCCACAGATTCTGACCCACGT
TATAGAAGGTTTTGTGATTCAGGAGGGACTGGAGCCGTTTCCTGTGAGTCGTTCATCTTTGCTG
ATAGAACAACCTGTGAAAAAGAGGCCTCTTTTGGATAATCAGGTGGTAAATTCGGTGTGTGTTC
AGCCAGAGCTACAGAATAACACAAAGCATGCAGATAACTCGTCCGACACAGAGATGGAGGACAT
GATTGCTGAAGAGACATTGGAAGAAATGGATAGTGAGTTACTCAAGTGTGAATTCTGTGGAAAA
ATGGGATATCCTAATGAATTTTTACGATCAAAACGATTCTGTACTATGTCATGTGCCAAAAGGT
ACAACGTTAGCTGTTCTAAAAAGTTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAAAG
TCTTGGGCATCGGGGCCGTCGTCCAAGTGGCCCTGAAGGGGCAGCGAGAGAACATATCCTTAGG
CAGCTTCCAATTACTTATCCATCTGCAGAAGAAGACTTGGCCTCTCGTGACGATCCTGTGCCGT
CTGCTATGACGACTCGCCTGCGCAGGCAGAGTGAGCGGGAAAGAGAACGCGAACTTCGCGACGT
GAGGATTAGGAAAATGCCTGAGAACAGCGACTTGCTCCCAGTCGCACAGACGGAGCCCTCCATA
TGGACGGTCGATGACGTCTGGGCCTTCATCCACTCTTTGCCTGGCTGTCAGGACGTTGCCGATG
AGTTCAGGGCACAGGAGATTGATGGGCAGGCACTGCTCCTGCTAAAAGAAGACCATCTCATGAG
CACAATGAACATGAAGCTGGGCCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTGAAGGAC
TCCTAACAGCAGCCAGGCTTTGTCTCAGTCCATTCCTCTTTCTCGGTGAAGGTAAAGCCTGATG
GGGCTGAGAGCATCGGACTGATGGGGGAAGGCCAAGTGCATTGGGACCGCCACGGCCAGTGCCG
ACATTTCTCTTCAGATGCCCTAACTCATCTTATGTTCTCATAATTAGCGACCGTCGGTGGTGTT
AATTTTACCAGTTACAGACTACACTGAAAGACTTGTTACAGAGGCCCATATTTTTCAAAGAAAC
ATGTTATACTAGATAATTTTTTAAAGGTAATGTTTATCATTAATATAAAAGAATCCTTTTAAAA
ATAATTATTGATTTACACTCCCCCTCCTTTAATTCTCTTTTCTTATACATTTGTCTACCCTGTT
AGTTTTCTAAATGTTGTCATAGAGATATAGGATAATTTAGGAGCCCATTGACAGAATTGAATGC
AATGAAATAGCAGTATGTTTTTAAAAGTATCTTCCACAGATGCTTTGGTTGTGAAATGGGATTG
TGTTTTAGCATAAGGAGTATTTTTGAAGGTTCTCAAGAGTCTCGTTCTAGCCTTTGCCCAGATT
GTCACAACTGACAGTTTTCCTCCTGGCTTGTACCTGAGAACAGTCGTTCTCTGTGACAGCATGT
CCTCCAGGGGACAGCCGGCAGTTGCTACACACACTCTGGCTGCCACAGTTGGGGCTGAGTTTTG
GGGAGGGTTGCTACAGGAATTGAGGCATGGCAGCCAGCTGGAGATGATGCTGACTATCCTCCTG
CACATAGGATGTCCCTCTGTCACCAAGAATGATGTGCTATAGATGGCAGTGGTGCCATGGTTAA
GAAGCCTGGGCGAGCAAAGTACTGTGTGTTGCTCTTTTCACCGCAGGGACATACATAAAAGATG
GGCCGGGCCAGGAGGATGGACAGTGAAGGATCAGCTAAGTGGCACTAGAGCTCTGCAGACGTAG
AGTTTAGTTTTACCGTATACTAGAAAGGAAAAGAAACCCATAAACTTGGCCTATAAAGCTAGCC
CAGGACCTCAGGTCATGGGCCTCTGGTGTGGCCCCTCTTCCTGACTCTGCTCCCATGCACTGAA
AGTGCTCCATGCAGTCACGCCTCAGAGCTTCTTCAGCAGCCGCATGGCAGTGGAGATGGGAGTC
CCTTGAAGCAGCCCTGCTGCGTCTGGCTAGAATGCACAGTTCTTTCTCCCTTACTAAGGCTTTG
GATTCTTCCCACAAAGTACTTAAAGTGATTTAATCAAAAGTTTTCATTCAGGGTTGGGGATTTA
GCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGTCCTGGGTTCGGTCCCCAGCTCCGGAAA
AAAAAAAAAAAGGAAAAAAAGTTTTCATTCATTCAACAGTTTTCTGTTAGGACATTAAGCCAAA
TCTTCCTGTGGATGCTCTGAAATCTTTCTAGTGCTGGGCATCAAAAGATTTGCTGATTTTGTTT
GCTTTCTCTATCTTTCACCACGTTTGAGAAATCTGAACAGTTGGAGGGGCATGTACGTATCCTT
GGCACAGACATAAGAGACAGCAAGAGTCTGAGCTCTGTCATCTTTCCAGCACTTTTCAGAGACT
GTGTTGGGTTAGTAGAAGACTAAAAGATGTCGCAGACATCGCAGATAAATTTATCTTTTGGCTC
TGTGTACATTAGAAAATGTTGGTTATTTTTATACAAAATATAGCGGATAATTTTTTTATTCTTT
AGATGCCTCTTGTTTGAATGTCTGCTTTGTGAGATTGTTGGTGTAGTTTTAGGAGGTGTTCACT
AGCTCTTGTGGACTCAGTGTAAGTGTCTGAGGCTCCTGTTTCCGACTACAGTTATAGTCTCCTT
GTTACTGTACAGCCAGCTTCATTTATTAGTACTGAGTCATCATGGCCGAGTGTCATGGCCGCTC
CTCCTCCTCCTCCTCCTAACCCAGGCTGTGCAGCACTAGGAGATTGATGGCTGCCTCAGCAATA
AGGCCTCCCTCCCACAGTGCTTGCACATAGCCTTTGAGGCACTAACTCTGCACTTGTACTAACG
CCAGCTCATCGTGTGCGTATGAGAAACCTGCGCCTAGCACTGTCCTTAACGCCCTAAACAGTTT
ACACGAGGGGTCTCTCCTGGAGGATGCCTTCTTGCCCTTCATCTTAGAAGTAGTCCAGATCTTC
TGTTGTCTGCTCTTAAATTTAACTAACAAAAACACTTTTTTCTTACAAGGCGGTTATTTTATTT
AGAAGTGGCTCGTTTGCTGTTGGGTAGCTTTCCCATCGCTGTAGGTGCTTCTTTCTAGGTAATT
TTCAGTCGTACTAATTTGAAAGCTTCAATTACGTGATGTGTTTCCCTGTCTCCCCAGCATTAAG
CTGTCAGGGTGACACAGACAGGAAGAATGCTGGCTTCATCTCCTTTCATATTACTAAGCACTTA
GTAACTTTCTTGGAGGGAAAAATATGACAAGCAGGAAGGGAACATGGCTTCTTCCTAGTTTTGC
TTCTTGAGTTTGCCTTTCCTGACTTGAAACCCTTCAACCACTGTGGGACACACTTTTCACATGT
TACTTAAGTTCTGTGTTCTTAGGAAAATAAACAGCTGGCTTGTAAAGGTTACTTTATATGACAA
CTTAGACACGCTTTTCATAGACACATGTAAGGCACATGGCACAGCTTCATCAGCACAGCAGAGA
CACAGCTTCAGTGACAGTGACTGATGTGACAGTGACACAGTGACACACAGTGACAGTGACAGTC
ACTCCCGCAGAACTGTGAAGTCTAGGTTAAAGGGCTGTCATCTGGGAGTAGAGGTAACAGATCA
AGAGGAAAGCGTGTTAGTGAGGCATCTGGAGAATGCAGGGCAACGGGGACCTCCTCCTCTGCTC
AGTTCATCATTACAGCCCTGAATGATTCATGATTTACCTGAGTAAAAAGAAGGGATTTTCTGTT
TCTCCTTTGTTTCTTGTGTTGGGAGAGTGGTGTGTGAGACTGTATCGTTATCATGACTTTGAAT
AACCATGGAGTCAGTCTTCATCTAGTCAGTGCAACATTTAGTCACATATCGATTTATAAACACA
AATCTTGGACTGAAATCCTTCACAGGACCCATGTTCTCATAAGCTCGTTAGATTGTGCATCTCA
CAGCTGTCTCCAGTACCTGAACTCTCTGACTGCTAATACTCTTAAAGCATCTCAGACATGTTCT
CAGCTAGGGAGCTGGCTACATGCTGTAGTCTGAAGACTTGGGGATGCTAGCAACACTTGGCTGC
CGACTGCTACCGTCAGCTAGCATGGGATGGCCTCACCTCATTTCCCACACTGAGCCCCATCAAG
CTCCAACCCCACCTCCAATAAACTGCACAGACTTCTTCTTAGTTCTTTACTGGGGCTTGGGTAG
CATCCTGACTTGGAGAGCTTCAGGCTTTTGTGATGGACAGACCAGTTGTATTTCAATGGAAGTC
TTGTCCATCCATGAACATCCTTTCCTAGTTTCTTGAGTATCATGTCTGACTGTGTGACTCATTC
CTTGAAGGCTTTTTGGGCATGGGGGGAAGTAGAGTAAGAGACAGATAGGAAGATGATATTGCTA
GCTAAATGAAGACATTAGCACGATGGTGGTCCTCAGTCACTTAGAATAATCCTTGGTGATGGAT
GGTTGGACAGGATGTTAGTAGTTTGGTTTGTCAGTACTCGGGATTGAGTCAGGGCCTCATTCTC
CACCTCTGAGATTGCACACTGTAGTTTTTGCTTGTTTGCCTGGACTAACCTGGAATTGTGGTCC
TCTGACCTTCTCTCAAGTGCTGGAATTTAACATCTGTGCTACCATGCCAGACCTAGCTCTTGTG
GTTTTCAATTGTCAAGATTTGGTTGTAATCAAATTAGCTATTTCTCTTTATCACCTGACCTGCT
CTGAAGAGTGCTGGTATTCCTAGTACCACTGGCACCCAGGTTGAGGAATCCTGGATTTTTGAAG
ATGATAATCAGAGGGAGAGAATCTGTCAAAATGTAGATTTTGTTTGTTATGATTGAGTGGCCAG
AATGCAGAGGCATTTCCAGTCAGATATGACAGCTGACTCAGTATTGCTGCCAGTCTTAAGGGAA
GGCACTGTAGGACAGTGTTGTGTCCCATTCTGAGCCTGGTAACTGCAGGTTTCTCCTGACTGGT
GGACTCCAGTAAGCACAAGCCTGCCTGTTTTCTTGGGGTAAAGCAGAATGTATCATGACATGAA
CTCTTTTAACTCACAGTCAGCAATACTGATATTATCACTCCATTTAGGATATTTTATTTTATCT
CAGAGACGGGTTTTGAGTTTAGATGAGTACAAATAAGTACTCAGAACAGTAAATGTCTTTTGTT
ATTCAAATTTAATTTTTAACTCATTGAACCAACACTTAAGGAATTCTCTGGGAAGAGATTTCTG
GTGTTAGATTATAAAATGCATTGCCATATAGTTTAGAGTTGAAATAAAAGCTGTTTTCCAATTA
AAAATGCTGCAAATTCTGCCATTTTAAAAAGTGGCTGAAATAGTGACTGAAGTAGTAGGCTTAT
CAGCTGTACACGCAGTTTTACAGTTATGTCTCCTTAACATTGTACTAAGAGAAAACTTTTTCTT
TTGGAAAGTTATAAGATCTGAGTTTATCTCCACGTATTACTACCATCGTGTTCCAGAGAAAGCC
ATCAGGAGGCCCCTGCCCTCTGTTGGCACACACAGCTTCCCTAGAGCAGTCTCATTTGCACACT
CTGGCAAGGGCCATACCTAAGGGAAAGTGTTTCCACAAGGGCTTCCCTTTCTTTCTCCTTTGGC
AGCTTGTGGACGTTTTATTTTATTTAAAATACAATTTGAATAAAATGTTAGGCACTAAACGAGC
TTCTATATAACACTTTATATTTTAGGCAAAGGCCTTTCTGTTGCTTTTCAAGTGTAAACCTACT
GCTGTCTATGATATTCCTGATATTGGGCATAAATCTATAGAATGAGAAAATAGTATGTAATGAA
TGAACTTTAATTAAAAATCAGTATAAACTTAAAACATCCCTATGCTAGCATGGCATGGTTTTAA
TGACGTGTAAGGGATGTAGGTCGGTCCTTCTTGCTGTCTGACTTAGTCCCAGCCATCGCCCTAG
GTGTTCATAGCACCTTTGCTTTTGTGCTTCCTGGGATACATCAGTGTTTCGTGGACCTTTCTCT
GACAGTGGTGCAAGAACGTCATGGAAGGATACATGAACCCACTGAGGAAGGAAGGGACTTTTTA
AATTTTGCCTCAAGTAAACTAAGTGTGTACAGTGTTTCTCCTTATACATGATGCTGTGTTAGTG
TTTGGGTAGTATTACAGCGAGAAGATGGAGAGGAAGCGGTGAGGCTTGGAGACGGCAGGCCAGC
CTGTGACACGCCGGGCAGCTATTTGGCTTTGTCATTTCAATGGACGGTGTGACTGATACCTGTA
CTATTAAATAGGCTGATTTGGTTTTTTTTTTGGCCTAAATCATTATTGAAGAAATATCCTCCCC
CAGCTTTAAAGTTACAGTCCTGAGCTACATAATTGGGATTACCACTGGGCTGACTGAATGAATG
CCCTGCCACCCGGGAACTGGGGTTTATGACGTCCGAGGGCTCAGTCACATCACCACTCTCGTCC
TTCCCATCAGTGGACCATCTCCTTGACTGTTGACAACAGTCAGACTACCTGCCGTGACCGACTG
CCGTGAGACTGTTGTGACAGCCATTGTCAGGACCGGTCCTGTACATGGTGTATGGGTGGCAGGA
TACAAGAAGTCGATGTGGAATCATTGTGCATTTTTATTTGTAAAAGTTTATATCCAGTATTGAC
AGTGGAACAGTTTGGAACAGTATTGATATTTGGAACAGTTTTCCAAAACAGAATCATCTGAAAT
GAGGCAGAGACCGAGACACTACTGCGGCCTTCCCCACAGTGCTGAGTGTACTATAGTGCATTAG
AGACGGCCACTTCTCAGACAGGGAAGACCCAGAAAGGGACTGCACTGCACCGGGAATGAGGAAC
TGGTGACAGAAAGTAGTTCCTAGCTGGGTGGTGGCTCATGCCTTTAATCCCAGCCTTGGGAGGC
AAAGGCAGGCGGATCTTTGTGAGATCGAAGCTAGTCTGGTCTACAGAGCAAGTTCTAGGACAGC
CAGGGCTACATAGAGAAACTCTGTCTCAAAAGCCACCACCACTACCAACAAAAAGCAGACCCCG
CTGCACTGACACGTATTTAAGGAGTGAAGATGGAGTTAGAGTCAGTTTGATGGGGTGAATCCCA
TATCCGCCTGGGATTCTGGGAGTCAGGCCGCAAGTCTTGCTTTAAATGCTAACATCTGTTGTTA
CTCACATTCTCTATAAAGATATAAAATTATATTTTAAAGACTTTTATGTATCAGAGCTATAGGT
TTTTAAAGTGGAGAAATGCCCAAATAAATTGTTAAATTACAATATATAATAGGTGCTTTCAAAT
TAAGGTTTTTTAAAGTTATAATAATCTAAATAGCCCACTAATCTGATCTTTGTAAATTGTCCCA
CGATTCTGGTTACTCTTAAGGTGTTTTTTGAGTTTTTGAAAGTTTACCTAGGTTGTACAATATC
TTCCTGTGCTGTTTAGATCTCTGTTGCATACATGCTGTTCTCGTGTCTGTGCTCTTAGAGCTTT
AGAGGTCAGCTGAAAATACGGAGTGCAGCTCTTGTGTATGATCCCACACTGATCGAGTAGACTG
CCAGTCACCTCATTCAGAACATAGGTCTGGGTTTGTACAGTAGGGGACTAAAAATCAAAGTTCA
GAAACTCACGAAGTGTGGGGATTGTGCTAGAAATGAGACTGTGCGTTGCAGACAGCCATGCACG
GGGTAGCTCTGACTTCAAGCCTCTTGGACTGGCTTAGAATGCTTTGCCTTCTCACCACTTAAAA
TTTGTTTCACAAAGGCAGGTTGCTGGGACTAATTATTTTTTAATGTTTTAAACCCATTTTAAAA
AGTCTTCCTTTTGGTTTTGACCATTGTTCTAAAATCAAAGTTTTACAATAAAAAAAAAAAATCC
CAAAAGACGATTCATCAAGGAAAAGAGCATAACCAAGGGGGAAAGAAACCATGTTTTAATCTTA
AAGAAAGCCAATATGAAGGTGGTAATAGATGTGTCTTACAGTGGACGCTGTATTAAGAGTCTTC
CTCACAGGAAACAACAGTTCTAGCGCCCGTGGCATAGATTCCTAGATGGCGCCCAAGCTACAGT
TACACAGTGTATGACCTAAAATGAAGTTAATTTTGCATTATAAGAGCACACCGTTATCTATGTA
AAAAGTGTTCATTTGATGTATTTTTTTAAGAAGAGATAAAGCACTTTCATATTAAGTAGCATGT
GTGTGAATTTTAGACTTCCTATGTGTGTCTAGTCAGTGGAATTAAAGGAGCGTCAGATGTTTGC
TGGCGATGTTAACTGCTAATGGAAGCACTTTCTCTGCTGCTTAGCCTCGCTTGGATTGCACCTT
TGTTACTGCACACGTTCACAGACAGTATTGTAACATGGCTTCGAGTGGGTCTGGGCGGACGACT
AGTGTTGGGCCTACAGGATCTTCTATTTATGTCGTTTATATTACGATAATATATTGTAGACCAG
TTGTAACTTCAGTTCTTTACAAATAAAAGCCTGACTGGTTATTGAATGTTCATTTCTTTAAGCC
TTTGAGAGACGGGGAAATCTAATAAAGACCTTAATGGAGGGCTGAA

hide sequence

RefSeq Acc Id:

XM_006232230 ⟹ XP_006232292

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI
mRatBN7.2	2	112,408,709 - 112,483,719 (+)	NCBI
Rnor_6.0	2	116,028,735 - 116,103,227 (+)	NCBI
Rnor_5.0	2	135,723,966 - 135,798,433 (+)	NCBI

Sequence:

show sequence

CTTAACCCCCCCCCCAGATCCCGCCCCACTGCTCTTGCAGGGGAAAGAGGAGGCGCATGCGCAC
CCCGTGTTAGTGATGGAGGAGAGAAGATGGCGGAAGCGGAATTTAAAGACCACAGTACAGCTAT
GGAGAGTGAGCCCAGCTCTGGAACGTCTGTGTCAACAACAGCCAGCAGCACCACCACCACCACC
ATCACCACATCCTCCTCCCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGGTCAGACCGAC
ATGCTGTCCAGGTAATTCAGCAGGCCCTGCATCGGCCCCCCAGCTCGGCAGCTCAGTACCTGCA
GCAGATGTACGCAGCGCAGCAGCAGCACCTCATGCTGCACACGGCCGCCCTTCAGCAGCAGCAT
CTGAGCAGCTCCCAGCTCCAGAGCCTGGCGGCCGTGCAGGCCAGTTTGTCCAGTGGAAGACCAT
CTACATCCCCCACAGGCAGTGTTACACAACAGTCAAGTATGTCCCAGACATCTATCAACCTCTC
CACTTCGCCGACACCTGCTCAGCTGATGAGCCGCTCGCAGGCCTCCAGCTCGACCAGTGGCAGC
ATTACCCAGCAGACCATGCTCCTAGGGAGCACCTCGCCCACCCTCACAGCCAGCCAGGCCCAAA
TGTATCTCCGAGCTCAAATGGTTCAGAATTTAACATTACGCAGCCAGAAGTTGGGTGTCTTATC
TAGCTCACAGAATGGCCCACCAAAAAGTGCTGGTCAAACCCAGTCCTTGACAATTTGCCATAAT
AAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGACCCTTCTCCAGAGAGCAAGAAGGGCG
GAAGTCCAGGTCTGGAATCTCGGAGCACAGCCGTCACACGGACATCAAGCATTCACCAGTTGAT
AGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATCAAACATCAACAGATTCCTCTC
CATTCACCACCTCCTAAAGTTTCCCATCATCAGCTGATATTACAACAGCAACAACAGCAAATTC
AGCCAATCACCCTTCAGAGTCCAAGTCAAGATCCACCCCCATCCCAGCACTGTATCCCACTCCC
CAACCATGGCCTTTCTCCGGCTTCCAGTAATGCCCAGTCACAGCAGCATTGCTCACCAATTCAG
AGCCATCCCCCGCCTTTAACTGTGTCTCCTAGCCAGGCCCAGTCTGCACAGCAGTCTGTAGTGG
TGTCTCCTCCCCCCGCTCATTCCCCAAGCCAGTCTCCTACCATCATTATCCATCCACAAGCACT
TGTCCAGCCACACCCTCTTGTGTCTTCAGCTCTTCACACAGGGCCAAACTTGCAGCAGGCCACT
GCTGATCAGGTACAATCCACAGCACAGCTGAACCTCCCGTCCCATCTTCCACTTCCAGCATCCC
CTGTAGTACACATTGGCCCCGTCCAGCAGTCTGCCTTGGTGTCCCCTGGTCAGCAGATAGTGTC
CCCAACATCACACCAGCAATATTCAACCCTACAGTCATCTCCAATTCCGATCGCAACCCCTCCA
CAGATGTCGGCATCTCCTCCAGCTCAGATCCCACCACTGCCCTTGCAGTCTATGCAGTCTTTAC
AAGTGCAGCCTGAAATTCTATCCCAGGGCCAGGTTTTGGTGCAGAATGCTTTGGTGTCAGAAGA
GGAGCTGCCTGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCCACAGACC
GTTGCGGTAAACCTACAAGTACAGCCGCCAGCACCTGTTGATCCACCAGTGGTTTATCAGGTAG
AAGATGTGTGCGAGGAAGAAAGGCCAGAGGAGTCCGATGAGTGTGCACGGATGGACCGAACACC
GCCGCCCCCCACTTTGTCTCCAGCAGCTATCACTGTGGGGAGAGGAGAGGATTTGACATCTGAG
CATCCTTTGTTAGAGCAAGTAGAGTTGCCTGCCGTGGCCTCAGTCAGTGCTTCTGTGATCAAGT
CTCCATCAGACCCAACCCATGTCTCTGCTCCTGCACCTCCACTCTTAATGCCCGCTGCCTCCAC
AAGGAGCAGCAGCACTTCTCTGGCCAGCAGCACCCCCAGCCTGGAAAACAAGCCTCCACAGGCT
ATCGTGAAGCCACAGATTCTGACCCACGTTATAGAAGGTTTTGTGATTCAGGAGGGACTGGAGC
CGTTTCCTGTGAGTCGTTCATCTTTGCTGATAGAACAACCTGTGAAAAAGAGGCCTCTTTTGGA
TAATCAGGTGGTAAATTCGGTGTGTGTTCAGCCAGAGCTACAGAATAACACAAAGCATGCAGAT
AACTCGTCCGACACAGAGATGGAGGACATGATTGCTGAAGAGACATTGGAAGAAATGGATAGTG
AGTTACTCAAGTGTGAATTCTGTGGAAAAATGGGATATCCTAATGAATTTTTACGATCAAAACG
ATTCTGTACTATGTCATGTGCCAAAAGGTACAACGTTAGCTGTTCTAAAAAGTTTGCACTTAGT
CGTTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCATCGGGGCCGTCGTCCAAGTGGCCCTG
AAGGGGCAGCGAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGAAGAAGA
CTTGGCCTCTCGTGACGATCCTGTGCCGTCTGCTATGACGACTCGCCTGCGCAGGCAGAGTGAG
CGGGAAAGAGAACGCGAACTTCGCGACGTGAGGATTAGGAAAATGCCTGAGAACAGCGACTTGC
TCCCAGTCGCACAGACGGAGCCCTCCATATGGACGGTCGATGACGTCTGGGCCTTCATCCACTC
TTTGCCTGGCTGTCAGGACGTTGCCGATGAGTTCAGGGCACAGGAGATTGATGGGCAGGCACTG
CTCCTGCTAAAAGAAGACCATCTCATGAGCACAATGAACATGAAGCTGGGCCCAGCCCTGAAGA
TCTGTGCACGCATCAACTCTCTGAAGGACTCCTAACAGCAGCCAGGCTTTGTCTCAGTCCATTC
CTCTTTCTCGGTGAAGGTAAAGCCTGATGGGGCTGAGAGCATCGGACTGATGGGGGAAGGCCAA
GTGCATTGGGACCGCCACGGCCAGTGCCGACATTTCTCTTCAGATGCCCTAACTCATCTTATGT
TCTCATAATTAGCGACCGTCGGTGGTGTTAATTTTACCAGTTACAGACTACACTGAAAGACTTG
TTACAGAGGCCCATATTTTTCAAAGAAACATGTTATACTAGATAATTTTTTAAAGGTAATGTTT
ATCATTAATATAAAAGAATCCTTTTAAAAATAATTATTGATTTACACTCCCCCTCCTTTAATTC
TCTTTTCTTATACATTTGTCTACCCTGTTAGTTTTCTAAATGTTGTCATAGAGATATAGGATAA
TTTAGGAGCCCATTGACAGAATTGAATGCAATGAAATAGCAGTATGTTTTTAAAAGTATCTTCC
ACAGATGCTTTGGTTGTGAAATGGGATTGTGTTTTAGCATAAGGAGTATTTTTGAAGGTTCTCA
AGAGTCTCGTTCTAGCCTTTGCCCAGATTGTCACAACTGACAGTTTTCCTCCTGGCTTGTACCT
GAGAACAGTCGTTCTCTGTGACAGCATGTCCTCCAGGGGACAGCCGGCAGTTGCTACACACACT
CTGGCTGCCACAGTTGGGGCTGAGTTTTGGGGAGGGTTGCTACAGGAATTGAGGCATGGCAGCC
AGCTGGAGATGATGCTGACTATCCTCCTGCACATAGGATGTCCCTCTGTCACCAAGAATGATGT
GCTATAGATGGCAGTGGTGCCATGGTTAAGAAGCCTGGGCGAGCAAAGTACTGTGTGTTGCTCT
TTTCACCGCAGGGACATACATAAAAGATGGGCCGGGCCAGGAGGATGGACAGTGAAGGATCAGC
TAAGTGGCACTAGAGCTCTGCAGACGTAGAGTTTAGTTTTACCGTATACTAGAAAGGAAAAGAA
ACCCATAAACTTGGCCTATAAAGCTAGCCCAGGACCTCAGGTCATGGGCCTCTGGTGTGGCCCC
TCTTCCTGACTCTGCTCCCATGCACTGAAAGTGCTCCATGCAGTCACGCCTCAGAGCTTCTTCA
GCAGCCGCATGGCAGTGGAGATGGGAGTCCCTTGAAGCAGCCCTGCTGCGTCTGGCTAGAATGC
ACAGTTCTTTCTCCCTTACTAAGGCTTTGGATTCTTCCCACAAAGTACTTAAAGTGATTTAATC
AAAAGTTTTCATTCAGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAG
GTCCTGGGTTCGGTCCCCAGCTCCGGAAAAAAAAAAAAAAGGAAAAAAAGTTTTCATTCATTCA
ACAGTTTTCTGTTAGGACATTAAGCCAAATCTTCCTGTGGATGCTCTGAAATCTTTCTAGTGCT
GGGCATCAAAAGATTTGCTGATTTTGTTTGCTTTCTCTATCTTTCACCACGTTTGAGAAATCTG
AACAGTTGGAGGGGCATGTACGTATCCTTGGCACAGACATAAGAGACAGCAAGAGTCTGAGCTC
TGTCATCTTTCCAGCACTTTTCAGAGACTGTGTTGGGTTAGTAGAAGACTAAAAGATGTCGCAG
ACATCGCAGATAAATTTATCTTTTGGCTCTGTGTACATTAGAAAATGTTGGTTATTTTTATACA
AAATATAGCGGATAATTTTTTTATTCTTTAGATGCCTCTTGTTTGAATGTCTGCTTTGTGAGAT
TGTTGGTGTAGTTTTAGGAGGTGTTCACTAGCTCTTGTGGACTCAGTGTAAGTGTCTGAGGCTC
CTGTTTCCGACTACAGTTATAGTCTCCTTGTTACTGTACAGCCAGCTTCATTTATTAGTACTGA
GTCATCATGGCCGAGTGTCATGGCCGCTCCTCCTCCTCCTCCTCCTAACCCAGGCTGTGCAGCA
CTAGGAGATTGATGGCTGCCTCAGCAATAAGGCCTCCCTCCCACAGTGCTTGCACATAGCCTTT
GAGGCACTAACTCTGCACTTGTACTAACGCCAGCTCATCGTGTGCGTATGAGAAACCTGCGCCT
AGCACTGTCCTTAACGCCCTAAACAGTTTACACGAGGGGTCTCTCCTGGAGGATGCCTTCTTGC
CCTTCATCTTAGAAGTAGTCCAGATCTTCTGTTGTCTGCTCTTAAATTTAACTAACAAAAACAC
TTTTTTCTTACAAGGCGGTTATTTTATTTAGAAGTGGCTCGTTTGCTGTTGGGTAGCTTTCCCA
TCGCTGTAGGTGCTTCTTTCTAGGTAATTTTCAGTCGTACTAATTTGAAAGCTTCAATTACGTG
ATGTGTTTCCCTGTCTCCCCAGCATTAAGCTGTCAGGGTGACACAGACAGGAAGAATGCTGGCT
TCATCTCCTTTCATATTACTAAGCACTTAGTAACTTTCTTGGAGGGAAAAATATGACAAGCAGG
AAGGGAACATGGCTTCTTCCTAGTTTTGCTTCTTGAGTTTGCCTTTCCTGACTTGAAACCCTTC
AACCACTGTGGGACACACTTTTCACATGTTACTTAAGTTCTGTGTTCTTAGGAAAATAAACAGC
TGGCTTGTAAAGGTTACTTTATATGACAACTTAGACACGCTTTTCATAGACACATGTAAGGCAC
ATGGCACAGCTTCATCAGCACAGCAGAGACACAGCTTCAGTGACAGTGACTGATGTGACAGTGA
CACAGTGACACACAGTGACAGTGACAGTCACTCCCGCAGAACTGTGAAGTCTAGGTTAAAGGGC
TGTCATCTGGGAGTAGAGGTAACAGATCAAGAGGAAAGCGTGTTAGTGAGGCATCTGGAGAATG
CAGGGCAACGGGGACCTCCTCCTCTGCTCAGTTCATCATTACAGCCCTGAATGATTCATGATTT
ACCTGAGTAAAAAGAAGGGATTTTCTGTTTCTCCTTTGTTTCTTGTGTTGGGAGAGTGGTGTGT
GAGACTGTATCGTTATCATGACTTTGAATAACCATGGAGTCAGTCTTCATCTAGTCAGTGCAAC
ATTTAGTCACATATCGATTTATAAACACAAATCTTGGACTGAAATCCTTCACAGGACCCATGTT
CTCATAAGCTCGTTAGATTGTGCATCTCACAGCTGTCTCCAGTACCTGAACTCTCTGACTGCTA
ATACTCTTAAAGCATCTCAGACATGTTCTCAGCTAGGGAGCTGGCTACATGCTGTAGTCTGAAG
ACTTGGGGATGCTAGCAACACTTGGCTGCCGACTGCTACCGTCAGCTAGCATGGGATGGCCTCA
CCTCATTTCCCACACTGAGCCCCATCAAGCTCCAACCCCACCTCCAATAAACTGCACAGACTTC
TTCTTAGTTCTTTACTGGGGCTTGGGTAGCATCCTGACTTGGAGAGCTTCAGGCTTTTGTGATG
GACAGACCAGTTGTATTTCAATGGAAGTCTTGTCCATCCATGAACATCCTTTCCTAGTTTCTTG
AGTATCATGTCTGACTGTGTGACTCATTCCTTGAAGGCTTTTTGGGCATGGGGGGAAGTAGAGT
AAGAGACAGATAGGAAGATGATATTGCTAGCTAAATGAAGACATTAGCACGATGGTGGTCCTCA
GTCACTTAGAATAATCCTTGGTGATGGATGGTTGGACAGGATGTTAGTAGTTTGGTTTGTCAGT
ACTCGGGATTGAGTCAGGGCCTCATTCTCCACCTCTGAGATTGCACACTGTAGTTTTTGCTTGT
TTGCCTGGACTAACCTGGAATTGTGGTCCTCTGACCTTCTCTCAAGTGCTGGAATTTAACATCT
GTGCTACCATGCCAGACCTAGCTCTTGTGGTTTTCAATTGTCAAGATTTGGTTGTAATCAAATT
AGCTATTTCTCTTTATCACCTGACCTGCTCTGAAGAGTGCTGGTATTCCTAGTACCACTGGCAC
CCAGGTTGAGGAATCCTGGATTTTTGAAGATGATAATCAGAGGGAGAGAATCTGTCAAAATGTA
GATTTTGTTTGTTATGATTGAGTGGCCAGAATGCAGAGGCATTTCCAGTCAGATATGACAGCTG
ACTCAGTATTGCTGCCAGTCTTAAGGGAAGGCACTGTAGGACAGTGTTGTGTCCCATTCTGAGC
CTGGTAACTGCAGGTTTCTCCTGACTGGTGGACTCCAGTAAGCACAAGCCTGCCTGTTTTCTTG
GGGTAAAGCAGAATGTATCATGACATGAACTCTTTTAACTCACAGTCAGCAATACTGATATTAT
CACTCCATTTAGGATATTTTATTTTATCTCAGAGACGGGTTTTGAGTTTAGATGAGTACAAATA
AGTACTCAGAACAGTAAATGTCTTTTGTTATTCAAATTTAATTTTTAACTCATTGAACCAACAC
TTAAGGAATTCTCTGGGAAGAGATTTCTGGTGTTAGATTATAAAATGCATTGCCATATAGTTTA
GAGTTGAAATAAAAGCTGTTTTCCAATTAAAAATGCTGCAAATTCTGCCATTTTAAAAAGTGGC
TGAAATAGTGACTGAAGTAGTAGGCTTATCAGCTGTACACGCAGTTTTACAGTTATGTCTCCTT
AACATTGTACTAAGAGAAAACTTTTTCTTTTGGAAAGTTATAAGATCTGAGTTTATCTCCACGT
ATTACTACCATCGTGTTCCAGAGAAAGCCATCAGGAGGCCCCTGCCCTCTGTTGGCACACACAG
CTTCCCTAGAGCAGTCTCATTTGCACACTCTGGCAAGGGCCATACCTAAGGGAAAGTGTTTCCA
CAAGGGCTTCCCTTTCTTTCTCCTTTGGCAGCTTGTGGACGTTTTATTTTATTTAAAATACAAT
TTGAATAAAATGTTAGGCACTAAACGAGCTTCTATATAACACTTTATATTTTAGGCAAAGGCCT
TTCTGTTGCTTTTCAAGTGTAAACCTACTGCTGTCTATGATATTCCTGATATTGGGCATAAATC
TATAGAATGAGAAAATAGTATGTAATGAATGAACTTTAATTAAAAATCAGTATAAACTTAAAAC
ATCCCTATGCTAGCATGGCATGGTTTTAATGACGTGTAAGGGATGTAGGTCGGTCCTTCTTGCT
GTCTGACTTAGTCCCAGCCATCGCCCTAGGTGTTCATAGCACCTTTGCTTTTGTGCTTCCTGGG
ATACATCAGTGTTTCGTGGACCTTTCTCTGACAGTGGTGCAAGAACGTCATGGAAGGATACATG
AACCCACTGAGGAAGGAAGGGACTTTTTAAATTTTGCCTCAAGTAAACTAAGTGTGTACAGTGT
TTCTCCTTATACATGATGCTGTGTTAGTGTTTGGGTAGTATTACAGCGAGAAGATGGAGAGGAA
GCGGTGAGGCTTGGAGACGGCAGGCCAGCCTGTGACACGCCGGGCAGCTATTTGGCTTTGTCAT
TTCAATGGACGGTGTGACTGATACCTGTACTATTAAATAGGCTGATTTGGTTTTTTTTTTGGCC
TAAATCATTATTGAAGAAATATCCTCCCCCAGCTTTAAAGTTACAGTCCTGAGCTACATAATTG
GGATTACCACTGGGCTGACTGAATGAATGCCCTGCCACCCGGGAACTGGGGTTTATGACGTCCG
AGGGCTCAGTCACATCACCACTCTCGTCCTTCCCATCAGTGGACCATCTCCTTGACTGTTGACA
ACAGTCAGACTACCTGCCGTGACCGACTGCCGTGAGACTGTTGTGACAGCCATTGTCAGGACCG
GTCCTGTACATGGTGTATGGGTGGCAGGATACAAGAAGTCGATGTGGAATCATTGTGCATTTTT
ATTTGTAAAAGTTTATATCCAGTATTGACAGTGGAACAGTTTGGAACAGTATTGATATTTGGAA
CAGTTTTCCAAAACAGAATCATCTGAAATGAGGCAGAGACCGAGACACTACTGCGGCCTTCCCC
ACAGTGCTGAGTGTACTATAGTGCATTAGAGACGGCCACTTCTCAGACAGGGAAGACCCAGAAA
GGGACTGCACTGCACCGGGAATGAGGAACTGGTGACAGAAAGTAGTTCCTAGCTGGGTGGTGGC
TCATGCCTTTAATCCCAGCCTTGGGAGGCAAAGGCAGGCGGATCTTTGTGAGATCGAAGCTAGT
CTGGTCTACAGAGCAAGTTCTAGGACAGCCAGGGCTACATAGAGAAACTCTGTCTCAAAAGCCA
CCACCACTACCAACAAAAAGCAGACCCCGCTGCACTGACACGTATTTAAGGAGTGAAGATGGAG
TTAGAGTCAGTTTGATGGGGTGAATCCCATATCCGCCTGGGATTCTGGGAGTCAGGCCGCAAGT
CTTGCTTTAAATGCTAACATCTGTTGTTACTCACATTCTCTATAAAGATATAAAATTATATTTT
AAAGACTTTTATGTATCAGAGCTATAGGTTTTTAAAGTGGAGAAATGCCCAAATAAATTGTTAA
ATTACAATATATAATAGGTGCTTTCAAATTAAGGTTTTTTAAAGTTATAATAATCTAAATAGCC
CACTAATCTGATCTTTGTAAATTGTCCCACGATTCTGGTTACTCTTAAGGTGTTTTTTGAGTTT
TTGAAAGTTTACCTAGGTTGTACAATATCTTCCTGTGCTGTTTAGATCTCTGTTGCATACATGC
TGTTCTCGTGTCTGTGCTCTTAGAGCTTTAGAGGTCAGCTGAAAATACGGAGTGCAGCTCTTGT
GTATGATCCCACACTGATCGAGTAGACTGCCAGTCACCTCATTCAGAACATAGGTCTGGGTTTG
TACAGTAGGGGACTAAAAATCAAAGTTCAGAAACTCACGAAGTGTGGGGATTGTGCTAGAAATG
AGACTGTGCGTTGCAGACAGCCATGCACGGGGTAGCTCTGACTTCAAGCCTCTTGGACTGGCTT
AGAATGCTTTGCCTTCTCACCACTTAAAATTTGTTTCACAAAGGCAGGTTGCTGGGACTAATTA
TTTTTTAATGTTTTAAACCCATTTTAAAAAGTCTTCCTTTTGGTTTTGACCATTGTTCTAAAAT
CAAAGTTTTACAATAAAAAAAAAAAATCCCAAAAGACGATTCATCAAGGAAAAGAGCATAACCA
AGGGGGAAAGAAACCATGTTTTAATCTTAAAGAAAGCCAATATGAAGGTGGTAATAGATGTGTC
TTACAGTGGACGCTGTATTAAGAGTCTTCCTCACAGGAAACAACAGTTCTAGCGCCCGTGGCAT
AGATTCCTAGATGGCGCCCAAGCTACAGTTACACAGTGTATGACCTAAAATGAAGTTAATTTTG
CATTATAAGAGCACACCGTTATCTATGTAAAAAGTGTTCATTTGATGTATTTTTTTAAGAAGAG
ATAAAGCACTTTCATATTAAGTAGCATGTGTGTGAATTTTAGACTTCCTATGTGTGTCTAGTCA
GTGGAATTAAAGGAGCGTCAGATGTTTGCTGGCGATGTTAACTGCTAATGGAAGCACTTTCTCT
GCTGCTTAGCCTCGCTTGGATTGCACCTTTGTTACTGCACACGTTCACAGACAGTATTGTAACA
TGGCTTCGAGTGGGTCTGGGCGGACGACTAGTGTTGGGCCTACAGGATCTTCTATTTATGTCGT
TTATATTACGATAATATATTGTAGACCAGTTGTAACTTCAGTTCTTTACAAATAAAAGCCTGAC
TGGTTATTGAATGTTCATTTCTTTAAGCCTTTGAGAGACGGGGAAATCTAATAAAGACCTTAAT
GGAGGGCTGAA

hide sequence

RefSeq Acc Id:

XM_039102231 ⟹ XP_038958159

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,297 - 114,412,132 (+)	NCBI
mRatBN7.2	2	112,408,827 - 112,483,719 (+)	NCBI

RefSeq Acc Id:

XM_039102232 ⟹ XP_038958160

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI
mRatBN7.2	2	112,408,709 - 112,483,719 (+)	NCBI

RefSeq Acc Id:

XM_039102233 ⟹ XP_038958161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI
mRatBN7.2	2	112,408,709 - 112,483,719 (+)	NCBI

RefSeq Acc Id:

XM_063281761 ⟹ XP_063137831

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI

RefSeq Acc Id:

XM_063281762 ⟹ XP_063137832

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,412,132 (+)	NCBI

RefSeq Acc Id:

XM_063281763 ⟹ XP_063137833

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,399,619 (+)	NCBI

RefSeq Acc Id:

XR_005500282

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,337,180 - 114,379,166 (+)	NCBI
mRatBN7.2	2	112,408,709 - 112,450,700 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101132	(Get FASTA)	NCBI Sequence Viewer
	XP_006232288	(Get FASTA)	NCBI Sequence Viewer
	XP_006232289	(Get FASTA)	NCBI Sequence Viewer
	XP_006232292	(Get FASTA)	NCBI Sequence Viewer
	XP_038958159	(Get FASTA)	NCBI Sequence Viewer
	XP_038958160	(Get FASTA)	NCBI Sequence Viewer
	XP_038958161	(Get FASTA)	NCBI Sequence Viewer
	XP_063137831	(Get FASTA)	NCBI Sequence Viewer
	XP_063137832	(Get FASTA)	NCBI Sequence Viewer
	XP_063137833	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM01154	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000063002
	ENSRNOP00000063002.2
	ENSRNOP00000072169
	ENSRNOP00000072169.2
	ENSRNOP00000078977
	ENSRNOP00000078977.1
	ENSRNOP00000096050
	ENSRNOP00000096050.1

RefSeq Acc Id:

NP_001101132 ⟸ NM_001107662

- UniProtKB:

D3ZS50 (UniProtKB/TrEMBL), A6IHK6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSQTSINLSTSPTPAQLMSRSQASSSTSGSITQQTMLLGSTSPTLTASQAQMYLRAQMVQNLTL
RSQKLGVLSSSQNGPPKSAGQTQSLTICHNKTTVTSSKISQRDPSPESKKGGSPGLESRSTAVT
RTSSIHQLIAPASYSPIQPHSLIKHQQIPLHSPPPKVSHHQLILQQQQQQIQPITLQSPSQDPP
PSQHCIPLPNHGLSPASSNAQSQQHCSPIQSHPPPLTVSPSQAQSAQQSVVVSPPPAHSPSQSP
TIIIHPQALVQPHPLVSSALHTGPNLQQATADQVQSTAQLNLPSHLPLPASPVVHIGPVQQSAL
VSPGQQIVSPTSHQQYSTLQSSPIPIATPPQMSASPPAQIPPLPLQSMQSLQVQPEILSQGQVL
VQNALVSEEELPAAEALVQLPFQTLPPPQTVAVNLQVQPPAPVDPPVVYQVEDVCEEERPEESD
ECARMDRTPPPPTLSPAAITVGRGEDLTSEHPLLEQVELPAVASVSASVIKSPSDPTHVSAPAP
PLLMPAASTRSSSTSLASSTPSLENKPPQAIVKPQILTHVIEGFVIQEGLEPFPVSRSSLLIEQ
PVKKRPLLDNQVVNSVCVQPELQNNTKHADNSSDTEMEDMIAEETLEEMDSELLKCEFCGKMGY
PNEFLRSKRFCTMSCAKRYNVSCSKKFALSRWNRKPDNQSLGHRGRRPSGPEGAAREHILRQLP
ITYPSAEEDLASRDDPVPSAMTTRLRRQSERERERELRDVRIRKMPENSDLLPVAQTEPSIWTV
DDVWAFIHSLPGCQDVADEFRAQEIDGQALLLLKEDHLMSTMNMKLGPALKICARINSLKDS

hide sequence

RefSeq Acc Id:	XP_006232288 ⟸ XM_006232226
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K2B0 (UniProtKB/TrEMBL), D3ZS50 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAEFKDHSTAMESEPSSGTSVSTTASSTTTTTITTSSSRMQQPQISVYSGSDRHAVQVIQQA LHRPPSSAAQYLQQMYAAQQQHLMLHTAALQQQHLSSSQLQSLAAVQASLSSGRPSTSPTGSVT QQSSMSQTSINLSTSPTPAQLMSRSQASSSTSGSITQQTMLLGSTSPTLTASQAQMYLRAQMLI FTPATTVAAVQSDIPVVSSSPSPSCQSAAAQVQNLTLRSQKLGVLSSSQNGPPKSAGQTQSLTI CHNKTTVTSSKISQRDPSPESKKGGSPGLESRSTAVTRTSSIHQLIAPASYSPIQPHSLIKHQQ IPLHSPPPKVSHHQLILQQQQQQIQPITLQSPSQDPPPSQHCIPLPNHGLSPASSNAQSQQHCS PIQSHPPPLTVSPSQAQSAQQSVVVSPPPAHSPSQSPTIIIHPQALVQPHPLVSSALHTGPNLQ QATADQVQSTAQLNLPSHLPLPASPVVHIGPVQQSALVSPGQQIVSPTSHQQYSTLQSSPIPIA TPPQMSASPPAQIPPLPLQSMQSLQVQPEILSQGQVLVQNALVSEEELPAAEALVQLPFQTLPP PQTVAVNLQVQPPAPVDPPVGMHLNQCHLHKVFSLKVYQVEDVCEEERPEESDECARMDRTPPP PTLSPAAITVGRGEDLTSEHPLLEQVELPAVASVSASVIKSPSDPTHVSAPAPPLLMPAASTRS SSTSLASSTPSLENKPPQAIVKPQILTHVIEGFVIQEGLEPFPVSRSSLLIEQPVKKRPLLDNQ VVNSVCVQPELQNNTKHADNSSDTEMEDMIAEETLEEMDSELLKCEFCGKMGYPNEFLRSKRFC TMSCAKRYNVSCSKKFALSRWNRKPDNQSLGHRGRRPSGPEGAAREHILRQLPITYPSAEEDLA SRDDPVPSAMTTRLRRQSERERERELRDVRIRKMPENSDLLPVAQTEPSIWTVDDVWAFIHSLP GCQDVADEFRAQEIDGQALLLLKEDHLMSTMNMKLGPALKICARINSLKDS hide sequence

RefSeq Acc Id:	XP_006232289 ⟸ XM_006232227
- Peptide Label:	isoform X3
- UniProtKB:	D3ZS50 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAEFKDHSTAMESEPSSGTSVSTTASSTTTTTITTSSSRMQQPQISVYSGSDRHAVQVIQQA LHRPPSSAAQYLQQMYAAQQQHLMLHTAALQQQHLSSSQLQSLAAVQASLSSGRPSTSPTGSVT QQSSMSQTSINLSTSPTPAQLMSRSQASSSTSGSITQQTMLLGSTSPTLTASQAQMYLRAQMLI FTPATTVAAVQSDIPVVSSSPSPSCQSAAAQVQNLTLRSQKLGVLSSSQNGPPKSAGQTQSLTI CHNKTTVTSSKISQRDPSPESKKGGSPGLESRSTAVTRTSSIHQLIAPASYSPIQPHSLIKHQQ IPLHSPPPKVSHHQLILQQQQQQIQPITLQSPSQDPPPSQHCIPLPNHGLSPASSNAQSQQHCS PIQSHPPPLTVSPSQAQSAQQSVVVSPPPAHSPSQSPTIIIHPQALVQPHPLVSSALHTGPNLQ QATADQVQSTAQLNLPSHLPLPASPVVHIGPVQQSALVSPGQQIVSPTSHQQYSTLQSSPIPIA TPPQMSASPPAQIPPLPLQSMQSLQVQPEILSQGQVLVQNALVSEEELPAAEALVQLPFQTLPP PQTVAVNLQVQPPAPVDPPVVYQVEDVCEEERPEESDECARMDRTPPPPTLSPAAITVGRGEDL TSEHPLLEQVELPAVASVSASVIKSPSDPTHVSAPAPPLLMPAASTRSSSTSLASSTPSLENKP PQAIVKPQILTHVIEGFVIQEGLEPFPVSRSSLLIEQPVKKRPLLDNQVVNSVCVQPELQNNTK HADNSSDTEMEDMIAEETLEEMDSELLKCEFCGKMGYPNEFLRSKRFCTMSCAKRYNVSCSKKF ALSRWNRKPDNQSLGHRGRRPSGPEGAAREHILRQLPITYPSAEEDLASRDDPVPSAMTTRLRR QSERERERELRDVRIRKMPENSDLLPVAQTEPSIWTVDDVWAFIHSLPGCQDVADEFRAQEIDG QALLLLKEDHLMSTMNMKLGPALKICARINSLKDS hide sequence

RefSeq Acc Id:	XP_006232292 ⟸ XM_006232230
- Peptide Label:	isoform X7
- UniProtKB:	D3ZS50 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAEFKDHSTAMESEPSSGTSVSTTASSTTTTTITTSSSRMQQPQISVYSGSDRHAVQVIQQA LHRPPSSAAQYLQQMYAAQQQHLMLHTAALQQQHLSSSQLQSLAAVQASLSSGRPSTSPTGSVT QQSSMSQTSINLSTSPTPAQLMSRSQASSSTSGSITQQTMLLGSTSPTLTASQAQMYLRAQMVQ NLTLRSQKLGVLSSSQNGPPKSAGQTQSLTICHNKTTVTSSKISQRDPSPESKKGGSPGLESRS TAVTRTSSIHQLIAPASYSPIQPHSLIKHQQIPLHSPPPKVSHHQLILQQQQQQIQPITLQSPS QDPPPSQHCIPLPNHGLSPASSNAQSQQHCSPIQSHPPPLTVSPSQAQSAQQSVVVSPPPAHSP SQSPTIIIHPQALVQPHPLVSSALHTGPNLQQATADQVQSTAQLNLPSHLPLPASPVVHIGPVQ QSALVSPGQQIVSPTSHQQYSTLQSSPIPIATPPQMSASPPAQIPPLPLQSMQSLQVQPEILSQ GQVLVQNALVSEEELPAAEALVQLPFQTLPPPQTVAVNLQVQPPAPVDPPVVYQVEDVCEEERP EESDECARMDRTPPPPTLSPAAITVGRGEDLTSEHPLLEQVELPAVASVSASVIKSPSDPTHVS APAPPLLMPAASTRSSSTSLASSTPSLENKPPQAIVKPQILTHVIEGFVIQEGLEPFPVSRSSL LIEQPVKKRPLLDNQVVNSVCVQPELQNNTKHADNSSDTEMEDMIAEETLEEMDSELLKCEFCG KMGYPNEFLRSKRFCTMSCAKRYNVSCSKKFALSRWNRKPDNQSLGHRGRRPSGPEGAAREHIL RQLPITYPSAEEDLASRDDPVPSAMTTRLRRQSERERERELRDVRIRKMPENSDLLPVAQTEPS IWTVDDVWAFIHSLPGCQDVADEFRAQEIDGQALLLLKEDHLMSTMNMKLGPALKICARINSLK DS hide sequence

RefSeq Acc Id:

ENSRNOP00000072169 ⟸ ENSRNOT00000089477

RefSeq Acc Id:

ENSRNOP00000063002 ⟸ ENSRNOT00000066495

RefSeq Acc Id:	XP_038958161 ⟸ XM_039102233
- Peptide Label:	isoform X5
- UniProtKB:	D3ZS50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038958160 ⟸ XM_039102232
- Peptide Label:	isoform X4
- UniProtKB:	D3ZS50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038958159 ⟸ XM_039102231
- Peptide Label:	isoform X2
- UniProtKB:	D3ZS50 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000078977 ⟸ ENSRNOT00000110653

RefSeq Acc Id:

ENSRNOP00000096050 ⟸ ENSRNOT00000109697

RefSeq Acc Id:	XP_063137831 ⟸ XM_063281761
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063137832 ⟸ XM_063281762
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063137833 ⟸ XM_063281763
- Peptide Label:	isoform X9

Protein Domains

FCS-type SAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K2B0-F1-model_v2	AlphaFold	A0A0G2K2B0	1-920	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691290

Promoter ID:

EPDNEW_R1799

Type:

multiple initiation site

Name:

Phc3_1

Description:

polyhomeotic homolog 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	116,028,807 - 116,028,867	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307998	AgrOrtholog
BioCyc Gene	G2FUF-53468	BioCyc
Ensembl Genes	ENSRNOG00000009491	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000066495	ENTREZGENE
	ENSRNOT00000066495.2	UniProtKB/TrEMBL
	ENSRNOT00000089477.2	UniProtKB/TrEMBL
	ENSRNOT00000109697.1	UniProtKB/TrEMBL
	ENSRNOT00000110653.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.50	UniProtKB/TrEMBL
	3.30.60.160	UniProtKB/TrEMBL
InterPro	SAM	UniProtKB/TrEMBL
	SAM/pointed	UniProtKB/TrEMBL
	Znf_FCS	UniProtKB/TrEMBL
	Znf_FCS_sf	UniProtKB/TrEMBL
KEGG Report	rno:310258	UniProtKB/TrEMBL
NCBI Gene	310258	ENTREZGENE
PANTHER	POLYCOMB GROUP PROTEIN	UniProtKB/TrEMBL
	POLYHOMEOTIC-LIKE PROTEIN 3	UniProtKB/TrEMBL
Pfam	SAM_1	UniProtKB/TrEMBL
	zf-FCS_1	UniProtKB/TrEMBL
PhenoGen	Phc3	PhenoGen
PROSITE	SAM_DOMAIN	UniProtKB/TrEMBL
	ZF_FCS	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000009491	RatGTEx
SMART	SAM	UniProtKB/TrEMBL
Superfamily-SCOP	SAM_homology	UniProtKB/TrEMBL
UniProt	A0A0G2K2B0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AP38_RAT	UniProtKB/TrEMBL
	A0A8I6G4B4_RAT	UniProtKB/TrEMBL
	A6IHK6	ENTREZGENE, UniProtKB/TrEMBL
	D3ZS50	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-01-27	Phc3	polyhomeotic homolog 3	Phc3	polyhomeotic homolog 3 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2009-02-26	Phc3	polyhomeotic homolog 3 (Drosophila)	Phc3	polyhomeotic like 3 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Phc3	polyhomeotic like 3 (Drosophila)	Phc3_predicted	polyhomeotic like 3 (Drosophila) (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Phc3_predicted	polyhomeotic like 3 (Drosophila) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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