Gene: Ccz1 (CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae))
Rattus norvegicus
Symbol:
Ccz1
Name:
CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
Description:
INTERACTS WITH caffeine; methylmercury chloride; cocaine (ortholog)
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Also known as:
hypothetical protein LOC360768; LOC360768_predicted; RGD1306410; RGD1306410_predicted; similar to CG14980-PB; similar to CG14980-PB (predicted); vacuolar fusion protein CCZ1 homolog
Orthologs:
Homo sapiens : CCZ1
(CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae))
HGNC
Ccz1
(CCZ1 vacuolar protein trafficking and biogenesis associated)
MGI
Latest Assembly:
RGSC Genome Assembly v3.4
Position:
Map Chr Position Strand Source Rat Cytogenetic Map 12 p11 NCBI RGSC Genome Assembly v5.0 12 14,682,886 - 14,706,379 + NCBI RGSC Genome Assembly v3.4 12 10,929,886 - 10,953,939 + NCBI Rat Celera Assembly 12 12,398,335 - 12,421,856 + NCBI Genome Assembly 3.1 12 10,959,813 - 10,983,862 + NCBI
Model
Gene-Chemical Interaction Annotations
References - curated
Genomics
Comparative Map Data
Ccz1 (Rattus norvegicus) Map Chr Position Strand Source Rat Cytogenetic Map 12 p11 NCBI RGSC Genome Assembly v5.0 12 14,682,886 - 14,706,379 + NCBI RGSC Genome Assembly v3.4 12 10,929,886 - 10,953,939 + NCBI Rat Celera Assembly 12 12,398,335 - 12,421,856 + NCBI Genome Assembly 3.1 12 10,959,813 - 10,983,862 + NCBI
CCZ1 (Homo sapiens) Map Chr Position Strand Source Human Alternate Assembly CHM1_1 7 5,909,557 - 5,936,828 + NCBI Human Alternate Assembly CRA_TCAGchr7v2 7 5,984,686 - 6,011,950 + NCBI Human Genome Assembly HuRef 7 5,869,039 - 5,871,629 + NCBI Human Genome Assembly HuRef 7 5,849,935 - 5,864,555 + NCBI Human Genome Assembly GRCh37 7 5,938,341 - 5,965,605 + NCBI Human Celera Assembly 7 6,829,407 - 6,835,946 - NCBI Human Genome Assembly Build 36 7 5,904,867 - 5,932,131 + NCBI Human Cytogenetic Map 7 p22.1 NCBI Human Genome Assembly 7 5,711,581 - 5,738,842 NCBI
Ccz1 (Mus musculus) Map Chr Position Strand Source Mouse Genome Assembly GRCm38 5 143,987,909 - 144,014,853 - NCBI Mouse cM Map 5 - NCBI Mouse Celera Assembly 5 140,970,306 - 140,997,297 - NCBI Mouse Genome Assembly Build 37 5 144,748,778 - 144,775,722 - NCBI Mouse Genome Assembly Build 36.1 5 144,748,778 - 144,775,722 - NCBI Mouse Cytogenetic Map 5 G2 NCBI
Position Markers
RH131271
Map Chr Position Strand Source Rat Cytogenetic Map 12 p11 UniSTS RGSC Genome Assembly v5.0 12 14,706,166 - 14,706,365 UniSTS RGSC Genome Assembly v3.4 12 10,953,726 - 10,953,925 UniSTS Rat Celera Assembly 12 12,421,643 - 12,421,842 UniSTS
BE110334
Map Chr Position Strand Source Rat Cytogenetic Map 12 p11 UniSTS RGSC Genome Assembly v5.0 12 14,695,775 - 14,695,924 UniSTS RGSC Genome Assembly v3.4 12 10,943,351 - 10,943,500 UniSTS Rat Celera Assembly 12 12,411,258 - 12,411,407 UniSTS RH 3.4 12 120.8 UniSTS
QTLs in Region (RGSC Genome Assembly v3.4)
61334 Gluco17 Glucose level QTL 17 6.3 Glucose level uptake 12 1 12240883 Rat 1357337 Gluco3 Glucose level QTL 3 1.9 Glucose level insulin-mediated glucose uptake 12 1 12240883 Rat 2303568 Bw88 Body weight QTL 88 3 Body weight 12 1 25457135 Rat 6893681 Bw109 Body weight QTL 109 2.3 .004 Body weight salt-loaded 12 1 25938641 Rat 61331 Eau2 Experimental allergic uveoretinitis QTL 2 .0005 Uvea inflammation score 12 1 29130348 Rat 1598855 Bp294 Blood pressure QTL 294 3.5 Blood pressure systolic 12 1 35270263 Rat 2303575 Insul14 Insulin level QTL 14 4 Insulin level 12 1 43562201 Rat 737979 Pia22 Pristane induced arthritis QTL 22 53.1 Joint/bone inflammation arthritis severity 12 530865 45530865 Rat 631521 Pia12 Pristane induced arthritis QTL 12 8.9 Joint/bone inflammation arthritis severity 12 555108 24748499 Rat 61416 Pia4 Pristane induced arthritis QTL 4 8.4 Joint/bone inflammation number of affected paws 12 568621 45568621 Rat 634351 Apr5 Acute phase response QTL 5 6.7 IL-6 level pristane induced 12 568621 45568621 Rat 2302042 Pia38 Pristane induced arthritis QTL 38 3.5 .001 Joint/bone inflammation pristane induced 12 568621 45568621 Rat 2312418 Kidm41 Kidney mass QTL 41 3.7 .0001 Kidney mass 12 665384 20932760 Rat 634350 Apr4 Acute phase response QTL 4 6 Alpha1 acid glycoprotein level pristane induced 12 2248421 46782294 Rat 61421 Cia12 Collagen induced arthritis QTL 12 4.6 Joint/bone inflammation type II collagen induced 12 7148164 36894750 Rat 1581516 Cm56 Cardiac mass QTL 56 4.2 .05 Cardiac mass left ventricle 12 7382953 12240754 Rat 1600391 Edcs2 Endometrial carcinoma susceptibility QTL2 3.5 .01 Endometrial tumor susceptibility 12 7382953 27853771 Rat 1302792 Scl21 Serum cholesterol QTL 21 3.8 .0011 Lipid level cholesterol 12 7754826 25802539 Rat 2293086 Iddm30 Insulin dependent diabetes mellitus QTL 30 3.42 Glucose level insulin-dependent 12 8901318 29369703 Rat 1331739 Hrtrt14 Heart rate QTL 14 3.56232 Heart rate 12 9628802 17773949 Rat 1300157 Rf21 Renal function QTL 21 4.42 Renal function salt-loaded renal blood flow 12 9628802 33216334 Rat 1549829 Scl48 Serum cholesterol level QTL 48 5 Lipid level baseline serum cholesterol 12 10716230 46782294 Rat 
Gene-Chemical Interaction Annotations
