Cc2d1a (coiled-coil and C2 domain containing 1A) - Rat Genome Database

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Gene: Cc2d1a (coiled-coil and C2 domain containing 1A) Rattus norvegicus
Analyze
Symbol: Cc2d1a
Name: coiled-coil and C2 domain containing 1A
RGD ID: 1306108
Description: Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of snRNA transcription by RNA polymerase II and positive regulation of canonical NF-kappaB signal transduction. Predicted to act upstream of or within several processes, including apical dendrite arborization; negative regulation of transcription by RNA polymerase II; and regulation of respiratory gaseous exchange by nervous system process. Located in nucleus. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 3 and intellectual disability. Orthologous to human CC2D1A (coiled-coil and C2 domain containing 1A); INTERACTS WITH 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil; allethrin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: coiled-coil and C2 domain-containing protein 1A; five prime repressor element under dual repression-binding protein 1; five repressor element under dual repression-binding protein 1; FRE under dual repression-binding protein 1; freud-1; LOC288908; RGD1306108; similar to cDNA sequence BC016188
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,916,587 - 40,931,702 (+)NCBIGRCr8
mRatBN7.21924,011,897 - 24,026,937 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,011,938 - 24,026,936 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,832,782 - 30,847,779 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01931,487,192 - 31,502,189 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01933,709,951 - 33,724,961 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,246,912 - 25,261,965 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,246,913 - 25,261,946 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,224,012 - 36,239,076 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,695,784 - 25,710,783 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11925,700,609 - 25,715,608 (+)NCBI
Celera1923,560,276 - 23,575,275 (+)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centrosome  (ISO)
cytosol  (IEA,ISO)
endosome membrane  (IEA,ISO)
fibrillar center  (IEA,ISO)
glutamatergic synapse  (ISO)
nucleus  (IBA,IDA)
plasma membrane  (IEA,ISO)
synapse  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Freud-2/CC2D1B mediates dual repression of the serotonin-1A receptor gene. Hadjighassem MR, etal., Eur J Neurosci. 2011 Jan;33(2):214-23. doi: 10.1111/j.1460-9568.2010.07498.x. Epub 2010 Dec 14.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Positive association of CC2D1A and CC2D2A gene haplotypes with mental retardation in a Han Chinese population. Shi ZY, etal., DNA Cell Biol. 2012 Jan;31(1):80-7. doi: 10.1089/dna.2011.1253. Epub 2011 Oct 24.
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:12761501   PMID:12917378   PMID:15057822   PMID:15489334   PMID:19056867   PMID:19647046   PMID:19946888   PMID:20026183   PMID:23533145   PMID:24946016   PMID:25468996   PMID:27150226  


Genomics

Comparative Map Data
Cc2d1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,916,587 - 40,931,702 (+)NCBIGRCr8
mRatBN7.21924,011,897 - 24,026,937 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,011,938 - 24,026,936 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,832,782 - 30,847,779 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01931,487,192 - 31,502,189 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01933,709,951 - 33,724,961 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,246,912 - 25,261,965 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,246,913 - 25,261,946 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,224,012 - 36,239,076 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,695,784 - 25,710,783 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11925,700,609 - 25,715,608 (+)NCBI
Celera1923,560,276 - 23,575,275 (+)NCBICelera
Cytogenetic Map19q11NCBI
CC2D1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381913,906,201 - 13,930,879 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1913,906,201 - 13,930,879 (+)EnsemblGRCh38hg38GRCh38
GRCh371914,017,014 - 14,041,692 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361913,878,052 - 13,902,692 (+)NCBINCBI36Build 36hg18NCBI36
Celera1913,910,701 - 13,935,438 (+)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1913,588,253 - 13,612,989 (+)NCBIHuRef
CHM1_11914,017,664 - 14,042,297 (+)NCBICHM1_1
T2T-CHM13v2.01914,032,358 - 14,057,039 (+)NCBIT2T-CHM13v2.0
Cc2d1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,859,457 - 84,874,546 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,859,457 - 84,874,565 (-)EnsemblGRCm39 Ensembl
GRCm38884,132,828 - 84,147,917 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,132,828 - 84,147,936 (-)EnsemblGRCm38mm10GRCm38
MGSCv37886,656,727 - 86,671,652 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36887,022,933 - 87,037,858 (-)NCBIMGSCv36mm8
Celera888,433,223 - 88,448,143 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.32NCBI
Cc2d1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541532,668,066 - 32,682,571 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541532,667,832 - 32,682,945 (+)NCBIChiLan1.0ChiLan1.0
CC2D1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22018,835,548 - 18,860,262 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11917,836,446 - 17,861,127 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01913,468,650 - 13,493,308 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11914,210,594 - 14,219,550 (+)NCBIpanpan1.1PanPan1.1panPan2
CC2D1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12048,549,107 - 48,566,062 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2048,549,591 - 48,565,828 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2048,423,173 - 48,440,139 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02049,067,294 - 49,084,315 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2049,067,295 - 49,084,158 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12048,277,836 - 48,294,830 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02048,704,318 - 48,721,302 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02048,947,626 - 48,964,622 (-)NCBIUU_Cfam_GSD_1.0
Cc2d1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118207,727,636 - 207,743,011 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366592,613,365 - 2,626,666 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366592,611,621 - 2,627,071 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CC2D1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl265,235,758 - 65,252,506 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1265,235,757 - 65,252,481 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,509,481 - 65,526,202 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CC2D1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1612,567,165 - 12,589,680 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl612,567,237 - 12,589,815 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660747,070,733 - 7,095,510 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cc2d1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249011,188,986 - 1,205,511 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249011,188,687 - 1,204,627 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cc2d1a
67 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:178
Count of miRNA genes:65
Interacting mature miRNAs:73
Transcripts:ENSRNOT00000009806, ENSRNOT00000045180
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 28 20 11 15 11 74 34 41 11
Low 15 37 30 4 30 8 11 1 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000009806   ⟹   ENSRNOP00000009806
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1925,247,094 - 25,261,946 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000045180   ⟹   ENSRNOP00000045667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1924,011,938 - 24,026,936 (+)Ensembl
Rnor_6.0 Ensembl1925,246,913 - 25,261,911 (-)Ensembl
RefSeq Acc Id: NM_001013869   ⟹   NP_001013891
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,916,703 - 40,931,702 (+)NCBI
mRatBN7.21924,011,938 - 24,026,937 (+)NCBI
Rnor_6.01925,246,912 - 25,261,911 (-)NCBI
Rnor_5.01936,224,012 - 36,239,076 (-)NCBI
RGSC_v3.41925,695,784 - 25,710,783 (+)RGD
Celera1923,560,276 - 23,575,275 (+)RGD
Sequence:
RefSeq Acc Id: XM_006255233   ⟹   XP_006255295
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,916,587 - 40,931,702 (+)NCBI
mRatBN7.21924,011,899 - 24,026,937 (+)NCBI
Rnor_6.01925,246,912 - 25,261,965 (-)NCBI
Rnor_5.01936,224,012 - 36,239,076 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006255234   ⟹   XP_006255296
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,916,587 - 40,931,702 (+)NCBI
mRatBN7.21924,011,899 - 24,026,937 (+)NCBI
Rnor_6.01925,246,912 - 25,261,965 (-)NCBI
Rnor_5.01936,224,012 - 36,239,076 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039097531   ⟹   XP_038953459
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,916,587 - 40,931,702 (+)NCBI
mRatBN7.21924,011,898 - 24,026,937 (+)NCBI
RefSeq Acc Id: XM_039097532   ⟹   XP_038953460
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,916,587 - 40,931,702 (+)NCBI
mRatBN7.21924,011,898 - 24,026,937 (+)NCBI
RefSeq Acc Id: XM_039097533   ⟹   XP_038953461
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,916,587 - 40,931,702 (+)NCBI
mRatBN7.21924,011,897 - 24,026,937 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001013891   ⟸   NM_001013869
- UniProtKB: A6IYA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006255296   ⟸   XM_006255234
- Peptide Label: isoform X5
- UniProtKB: Q66HA5 (UniProtKB/Swiss-Prot),   A6IYA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006255295   ⟸   XM_006255233
- Peptide Label: isoform X4
- UniProtKB: A0A8L2QP71 (UniProtKB/TrEMBL),   A6IYA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000045667   ⟸   ENSRNOT00000045180
RefSeq Acc Id: ENSRNOP00000009806   ⟸   ENSRNOT00000009806
RefSeq Acc Id: XP_038953461   ⟸   XM_039097533
- Peptide Label: isoform X3
- UniProtKB: A6IYA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953459   ⟸   XM_039097531
- Peptide Label: isoform X1
- UniProtKB: A6IYA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953460   ⟸   XM_039097532
- Peptide Label: isoform X2
- UniProtKB: A6IYA7 (UniProtKB/TrEMBL)
Protein Domains
C2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q66HA5-F1-model_v2 AlphaFold Q66HA5 1-941 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701013
Promoter ID:EPDNEW_R11537
Type:initiation region
Name:Cc2d1a_1
Description:coiled-coil and C2 domain containing 1A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01925,261,915 - 25,261,975EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306108 AgrOrtholog
BioCyc Gene G2FUF-6065 BioCyc
Ensembl Genes ENSRNOG00000006747 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000045180.5 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7122187 IMAGE-MGC_LOAD
InterPro C2_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_Freud UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CC2D1A/B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DM14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:288908 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94029 IMAGE-MGC_LOAD
NCBI Gene 288908 ENTREZGENE
PANTHER COILED-COIL AND C2 DOMAIN-CONTAINING PROTEIN 1A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13076 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CC2D1A-B_DM14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00168 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cc2d1a PhenoGen
PROSITE PS50004 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000006747 RatGTEx
SMART DM14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00239 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49562 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8L2QP71 ENTREZGENE, UniProtKB/TrEMBL
  A6IYA7 ENTREZGENE, UniProtKB/TrEMBL
  C2D1A_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-07 Cc2d1a  coiled-coil and C2 domain containing 1A  RGD1306108  similar to cDNA sequence BC016188  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1306108  similar to cDNA sequence BC016188  RGD1306108_predicted  similar to cDNA sequence BC016188 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1306108_predicted  similar to cDNA sequence BC016188 (predicted)  LOC288908_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC288908_predicted  similar to cDNA sequence BC016188 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL