Cyria (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 40,774,165 - 40,883,005 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 35,045,208 - 35,150,669 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 35,045,208 - 35,150,668 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 35,346,881 - 35,452,349 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 35,661,507 - 35,766,973 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 35,123,999 - 35,229,298 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 37,555,167 - 37,661,196 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 37,555,182 - 37,665,064 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 50,682,248 - 50,788,038 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 35,830,497 - 35,936,574 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 35,875,817 - 35,940,028 (+) | NCBI | | | | | Celera | 6 | 34,410,256 - 34,515,470 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q15 | NCBI | | | | |
|
CYRIA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 16,549,459 - 16,665,834 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 16,549,459 - 16,666,331 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 16,730,727 - 16,847,102 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 16,597,382 - 16,710,580 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 16,655,528 - 16,768,724 | NCBI | | | | | Celera | 2 | 16,610,797 - 16,684,917 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | p24.2 | NCBI | | | | | HuRef | 2 | 16,505,559 - 16,621,967 (-) | NCBI | | HuRef | | | CHM1_1 | 2 | 16,660,180 - 16,734,676 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 16,581,160 - 16,697,534 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Cyria (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 12 | 12,312,136 - 12,430,966 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 12,312,140 - 12,430,966 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 12,262,134 - 12,380,965 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 12,262,139 - 12,380,965 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 12,268,945 - 12,383,169 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 12,302,329 - 12,402,349 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 12,607,335 - 12,720,232 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | A1.1 | NCBI | | | | | cM Map | 12 | 5.63 | NCBI | | | | |
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Cyria (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955487 | 9,545,639 - 9,636,243 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955487 | 9,545,639 - 9,636,183 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CYRIA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 12 | 109,868,729 - 109,979,134 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 109,872,697 - 109,982,420 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 16,532,230 - 16,642,397 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 16,660,464 - 16,728,797 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 16,660,469 - 16,728,797 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
CYRIA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 17 | 12,208,319 - 12,311,775 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 12,211,494 - 12,270,152 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 12,154,659 - 12,258,045 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 12,338,751 - 12,442,231 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 12,338,753 - 12,442,261 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 12,196,811 - 12,300,249 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 12,208,493 - 12,311,876 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 12,234,516 - 12,296,349 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cyria (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024406292 | 56,700,509 - 56,758,417 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936493 | 14,081,148 - 14,139,780 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936493 | 14,081,178 - 14,139,054 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CYRIA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 3 | 120,968,060 - 121,069,240 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 120,968,016 - 121,069,372 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 129,216,661 - 129,316,473 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CYRIA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 14 | 90,990,100 - 91,076,449 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 90,961,862 - 91,074,560 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 21,141,542 - 21,251,039 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cyria (Heterocephalus glaber - naked mole-rat) |
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