Taf1c (TATA-box binding protein associated factor, RNA polymerase 1 subunit C) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Taf1c (TATA-box binding protein associated factor, RNA polymerase 1 subunit C) Rattus norvegicus
Analyze
Symbol: Taf1c
Name: TATA-box binding protein associated factor, RNA polymerase 1 subunit C
RGD ID: 1305658
Description: Predicted to enable RNA polymerase I core promoter sequence-specific DNA binding activity and RNA polymerase I general transcription initiation factor activity. Predicted to be involved in RNA polymerase I preinitiation complex assembly. Predicted to be located in nucleolus and nucleoplasm. Predicted to be part of RNA polymerase transcription factor SL1 complex. Predicted to be active in fibrillar center. Orthologous to human TAF1C (TATA-box binding protein associated factor, RNA polymerase I subunit C); PARTICIPATES IN RNA polymerase I transcription pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC361420; LOC361421; similar to TAFI95; Taf1c_predicted; TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C; TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C (predicted); TATA box-binding protein-associated factor 1C; TATA box-binding protein-associated factor, RNA polymerase I, subunit C; TBP-associated factor 1C; transcription initiation factor SL1/TIF-IB subunit C
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81964,561,079 - 64,567,599 (-)NCBIGRCr8
mRatBN7.21947,652,451 - 47,658,971 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1947,652,452 - 47,658,971 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1954,446,801 - 54,453,321 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01955,127,419 - 55,133,939 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01957,340,930 - 57,347,450 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01952,246,061 - 52,252,642 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1952,246,068 - 52,252,587 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01962,994,275 - 63,000,801 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41949,842,371 - 49,848,891 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11949,851,555 - 49,853,756 (-)NCBI
Celera1946,911,512 - 46,918,032 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. TFIIB-related factors in RNA polymerase I transcription. Knutson BA and Hahn S, Biochim Biophys Acta. 2013 Mar-Apr;1829(3-4):265-73. doi: 10.1016/j.bbagrm.2012.08.003. Epub 2012 Aug 30.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
9. RNA polymerase I activity is regulated at multiple steps in the transcription cycle: recent insights into factors that influence transcription elongation. Schneider DA Gene. 2012 Feb 10;493(2):176-84. doi: 10.1016/j.gene.2011.08.006. Epub 2011 Aug 26.
10. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:12498690   PMID:15489334   PMID:22368283  


Genomics

Comparative Map Data
Taf1c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81964,561,079 - 64,567,599 (-)NCBIGRCr8
mRatBN7.21947,652,451 - 47,658,971 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1947,652,452 - 47,658,971 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1954,446,801 - 54,453,321 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01955,127,419 - 55,133,939 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01957,340,930 - 57,347,450 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01952,246,061 - 52,252,642 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1952,246,068 - 52,252,587 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01962,994,275 - 63,000,801 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41949,842,371 - 49,848,891 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11949,851,555 - 49,853,756 (-)NCBI
Celera1946,911,512 - 46,918,032 (-)NCBICelera
Cytogenetic Map19q12NCBI
TAF1C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381684,177,855 - 84,187,057 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1684,177,847 - 84,187,070 (-)EnsemblGRCh38hg38GRCh38
GRCh371684,211,461 - 84,220,663 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361682,768,962 - 82,778,163 (-)NCBINCBI36Build 36hg18NCBI36
Build 341682,768,962 - 82,778,163NCBI
Celera1668,513,270 - 68,522,472 (-)NCBICelera
Cytogenetic Map16q24.1NCBI
HuRef1669,965,230 - 69,974,453 (-)NCBIHuRef
CHM1_11685,622,840 - 85,632,064 (-)NCBICHM1_1
T2T-CHM13v2.01690,243,928 - 90,253,130 (-)NCBIT2T-CHM13v2.0
Taf1c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398120,324,713 - 120,331,945 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8120,324,610 - 120,331,961 (-)EnsemblGRCm39 Ensembl
GRCm388119,597,974 - 119,605,206 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8119,597,871 - 119,605,222 (-)EnsemblGRCm38mm10GRCm38
MGSCv378122,121,874 - 122,129,140 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368122,483,951 - 122,491,160 (-)NCBIMGSCv36mm8
Celera8123,815,454 - 123,822,720 (-)NCBICelera
Cytogenetic Map8E1NCBI
cM Map868.02NCBI
Taf1c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495556487,452 - 134,650 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955564121,988 - 132,347 (+)NCBIChiLan1.0ChiLan1.0
TAF1C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21893,925,358 - 93,934,122 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11699,842,523 - 99,851,287 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01664,843,197 - 64,852,408 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11684,184,928 - 84,194,147 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1684,184,928 - 84,194,147 (-)Ensemblpanpan1.1panPan2
TAF1C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1568,175,196 - 68,184,267 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl568,175,014 - 68,184,277 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha568,189,403 - 68,198,337 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0568,413,879 - 68,481,937 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl568,473,001 - 68,481,935 (+)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0568,257,398 - 68,266,294 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0568,673,069 - 68,682,017 (+)NCBIUU_Cfam_GSD_1.0
Taf1c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934927,895,585 - 27,900,276 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366413,649,177 - 3,653,798 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TAF1C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl64,448,778 - 4,457,088 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.164,448,672 - 4,457,109 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.265,030,498 - 5,038,769 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TAF1C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1569,587,592 - 69,596,312 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl569,587,769 - 69,593,814 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660476,159,382 - 6,167,713 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Taf1c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247463,406,644 - 3,412,188 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247463,403,122 - 3,412,709 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Taf1c
17 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:326
Count of miRNA genes:208
Interacting mature miRNAs:245
Transcripts:ENSRNOT00000020990
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum insulin level (CMO:0000358)193383821455283146Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)193383821455283146Rat
5135224Leukc1Leukocyte quantity QTL 1eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)194434021455283277Rat

Markers in Region
RH134909  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21947,652,582 - 47,652,773 (+)MAPPERmRatBN7.2
Rnor_6.01952,246,199 - 52,246,389NCBIRnor6.0
Rnor_5.01962,994,413 - 62,994,603UniSTSRnor5.0
RGSC_v3.41949,842,503 - 49,842,693UniSTSRGSC3.4
Celera1946,911,644 - 46,911,834UniSTS
RH 3.4 Map19649.0UniSTS
Cytogenetic Map19q12UniSTS
AI145291  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21947,652,061 - 47,652,279 (+)MAPPERmRatBN7.2
Rnor_6.01952,245,678 - 52,245,895NCBIRnor6.0
Rnor_5.01962,993,892 - 62,994,109UniSTSRnor5.0
RGSC_v3.41949,841,982 - 49,842,199UniSTSRGSC3.4
Celera1946,911,123 - 46,911,340UniSTS
RH 3.4 Map19653.0UniSTS
Cytogenetic Map19q12UniSTS
BE115013  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21947,652,823 - 47,652,993 (+)MAPPERmRatBN7.2
Rnor_6.01952,246,440 - 52,246,609NCBIRnor6.0
Rnor_5.01962,994,654 - 62,994,823UniSTSRnor5.0
RGSC_v3.41949,842,744 - 49,842,913UniSTSRGSC3.4
Celera1946,911,885 - 46,912,054UniSTS
RH 3.4 Map19647.9UniSTS
Cytogenetic Map19q12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 16 11 6 7 6 57 20 36 1
Low 2 27 46 35 12 35 8 11 17 15 5 10 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000020990   ⟹   ENSRNOP00000020990
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1947,652,452 - 47,658,971 (-)Ensembl
Rnor_6.0 Ensembl1952,246,068 - 52,252,587 (-)Ensembl
RefSeq Acc Id: NM_001014155   ⟹   NP_001014177
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81964,561,079 - 64,567,599 (-)NCBI
mRatBN7.21947,652,451 - 47,658,971 (-)NCBI
Rnor_6.01952,246,067 - 52,252,587 (-)NCBI
Rnor_5.01962,994,275 - 63,000,801 (-)NCBI
RGSC_v3.41949,842,371 - 49,848,891 (-)RGD
Celera1946,911,512 - 46,918,032 (-)RGD
Sequence:
RefSeq Acc Id: XM_039097872   ⟹   XP_038953800
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81964,561,079 - 64,565,358 (-)NCBI
mRatBN7.21947,652,451 - 47,658,940 (-)NCBI
RefSeq Acc Id: XM_039097873   ⟹   XP_038953801
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81964,561,079 - 64,565,351 (-)NCBI
mRatBN7.21947,652,451 - 47,658,940 (-)NCBI
RefSeq Acc Id: XM_063278146   ⟹   XP_063134216
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81964,561,079 - 64,566,779 (-)NCBI
RefSeq Acc Id: XM_063278147   ⟹   XP_063134217
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81964,561,079 - 64,565,092 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001014177   ⟸   NM_001014155
- UniProtKB: Q6P773 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000020990   ⟸   ENSRNOT00000020990
RefSeq Acc Id: XP_038953801   ⟸   XM_039097873
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038953800   ⟸   XM_039097872
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063134216   ⟸   XM_063278146
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063134217   ⟸   XM_063278147
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6P773-F1-model_v2 AlphaFold Q6P773 1-842 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701183
Promoter ID:EPDNEW_R11705
Type:initiation region
Name:Taf1c_1
Description:TATA-box binding protein associated factor, RNA polymerase 1subunit C
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01952,252,583 - 52,252,643EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305658 AgrOrtholog
BioCyc Gene G2FUF-5511 BioCyc
Ensembl Genes ENSRNOG00000015632 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00060022597 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000020990 ENTREZGENE
  ENSRNOT00000020990.5 UniProtKB/Swiss-Prot
  ENSRNOT00060039210 UniProtKB/Swiss-Prot
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:5598458 IMAGE-MGC_LOAD
  IMAGE:5599601 IMAGE-MGC_LOAD
InterPro TAF1C UniProtKB/Swiss-Prot
  TAF1C_beta-prop UniProtKB/Swiss-Prot
  TAF1C_C UniProtKB/Swiss-Prot
  TAF1C_HB UniProtKB/Swiss-Prot
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:361420 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72580 IMAGE-MGC_LOAD
  MGC:72608 IMAGE-MGC_LOAD
NCBI Gene Taf1c ENTREZGENE
PANTHER PTHR15319 UniProtKB/Swiss-Prot
  TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C UniProtKB/Swiss-Prot
Pfam TAF1C_beta-prop UniProtKB/Swiss-Prot
  TAF1C_C UniProtKB/Swiss-Prot
  TAF1C_HB UniProtKB/Swiss-Prot
PhenoGen Taf1c PhenoGen
RatGTEx ENSRNOG00000015632 RatGTEx
  ENSRNOG00060022597 RatGTEx
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot
UniProt Q6P773 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-18 Taf1c  TATA-box binding protein associated factor, RNA polymerase 1 subunit C  Taf1c  TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2007-02-07 Taf1c  TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C  Taf1c_predicted  TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C (predicted)  Symbol and Name updated 1299863 APPROVED
2007-02-07 Taf1c_predicted  TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C (predicted)  LOC361420  similar to TAFI95  Data merged from RGD:1549769 737654 PROVISIONAL
2005-09-15 LOC361420  similar to TAFI95      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-01-12 Taf1c_predicted  TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C (predicted)      Symbol and Name status set to approved 70820 APPROVED