Cpa2 (carboxypeptidase A2) - Rat Genome Database

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Gene: Cpa2 (carboxypeptidase A2) Rattus norvegicus
Analyze
Symbol: Cpa2
Name: carboxypeptidase A2
RGD ID: 1305563
Description: Predicted to enable metallocarboxypeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human CPA2 (carboxypeptidase A2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: carboxypeptidase A isoform; carboxypeptidase A2 (mapped); carboxypeptidase A2 (pancreatic); CPA2(S); Cpa2_mapped; LOC296959
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8460,125,297 - 60,151,066 (+)NCBIGRCr8
mRatBN7.2459,160,357 - 59,183,677 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl459,160,357 - 59,183,674 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx464,138,256 - 64,161,826 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0460,054,438 - 60,078,012 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0458,456,358 - 58,479,936 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0457,855,416 - 57,879,239 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl457,855,416 - 57,879,239 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0457,611,439 - 57,640,155 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4457,452,111 - 57,475,357 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1457,728,244 - 57,751,439 (+)NCBI
Celera454,259,278 - 54,282,148 (+)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IBA,IEA)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Structural characterization of the rat carboxypeptidase A1 and B genes. Comparative analysis of the rat carboxypeptidase gene family. Clauser E, etal., J Biol Chem 1988 Nov 25;263(33):17837-45.
2. A novel rat carboxypeptidase, CPA2: characterization, molecular cloning, and evolutionary implications on substrate specificity in the carboxypeptidase gene family. Gardell SJ, etal., J Biol Chem 1988 Nov 25;263(33):17828-36.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
6. Carboxypeptidase A isoforms produced by distinct genes or alternative splicing in brain and other extrapancreatic tissues. Normant E, etal., J Biol Chem 1995 Sep 1;270(35):20543-9.
7. Procarboxypeptidase in rat pancreas. Overall characterization and comparison of the activation processes. Oppezzo O, etal., Eur J Biochem. 1994 May 15;222(1):55-63.
8. GOA pipeline RGD automated data pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1761558   PMID:2920728   PMID:22178042  


Genomics

Comparative Map Data
Cpa2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8460,125,297 - 60,151,066 (+)NCBIGRCr8
mRatBN7.2459,160,357 - 59,183,677 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl459,160,357 - 59,183,674 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx464,138,256 - 64,161,826 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0460,054,438 - 60,078,012 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0458,456,358 - 58,479,936 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0457,855,416 - 57,879,239 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl457,855,416 - 57,879,239 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0457,611,439 - 57,640,155 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4457,452,111 - 57,475,357 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1457,728,244 - 57,751,439 (+)NCBI
Celera454,259,278 - 54,282,148 (+)NCBICelera
Cytogenetic Map4q22NCBI
CPA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387130,266,863 - 130,289,798 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7130,266,863 - 130,289,798 (+)EnsemblGRCh38hg38GRCh38
GRCh377129,906,703 - 129,929,638 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367129,693,960 - 129,716,871 (+)NCBINCBI36Build 36hg18NCBI36
Build 347129,500,674 - 129,523,586NCBI
Celera7124,702,462 - 124,725,405 (+)NCBICelera
Cytogenetic Map7q32.2NCBI
HuRef7124,269,090 - 124,292,037 (+)NCBIHuRef
CHM1_17129,840,284 - 129,863,099 (+)NCBICHM1_1
T2T-CHM13v2.07131,580,250 - 131,603,180 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27129,292,077 - 129,315,021 (+)NCBI
Cpa2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,541,641 - 30,564,475 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl630,541,581 - 30,564,475 (+)EnsemblGRCm39 Ensembl
GRCm38630,541,642 - 30,564,476 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,541,582 - 30,564,476 (+)EnsemblGRCm38mm10GRCm38
MGSCv37630,491,642 - 30,514,473 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36630,491,652 - 30,514,483 (+)NCBIMGSCv36mm8
Celera630,551,527 - 30,574,335 (+)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.52NCBI
Cpa2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547910,908,770 - 10,937,755 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495547910,909,466 - 10,937,720 (+)NCBIChiLan1.0ChiLan1.0
CPA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26167,087,823 - 167,112,259 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1719,098,067 - 19,122,503 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07122,203,510 - 122,256,180 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17134,750,878 - 134,773,437 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7134,750,878 - 134,773,437 (+)Ensemblpanpan1.1panPan2
CPA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1146,645,142 - 6,665,716 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl146,562,768 - 6,665,659 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha146,331,119 - 6,351,720 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0146,405,439 - 6,426,044 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl146,405,439 - 6,425,966 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1146,610,939 - 6,631,530 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0146,355,610 - 6,376,204 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0146,499,246 - 6,519,841 (-)NCBIUU_Cfam_GSD_1.0
Cpa2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511824,843,608 - 24,881,073 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365794,976,205 - 4,995,719 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365794,976,205 - 4,995,719 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CPA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1818,557,518 - 18,577,682 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11818,557,518 - 18,581,957 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21819,545,756 - 19,577,295 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CPA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12198,896,973 - 98,920,794 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2198,898,373 - 98,920,795 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660424,483,074 - 4,505,757 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cpa2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247836,001,929 - 6,024,389 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247836,001,911 - 6,024,389 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cpa2
139 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:79
Count of miRNA genes:67
Interacting mature miRNAs:69
Transcripts:ENSRNOT00000029608
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4521460278882945Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829465958103Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41081417091360527Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41467806559678065Rat
2313401Anxrr27Anxiety related response QTL 27aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)41793350862933508Rat
61412Pia2Pristane induced arthritis QTL 23.9joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)42133334362278020Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42690728575585128Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42690728575585128Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)42949419581006281Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
8552801Bw143Body weight QTL 1437.3body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)43443048482490359Rat
8552809Vie5Viral induced encephalitis QTL 525.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)436303261103194984Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
61475Aia2Adjuvant induced arthritis QTL 25.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)43950527573892441Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)43952426474726312Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
8694439Bw168Body weight QTL 1689.570.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)44043341485433414Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
4889969Bss96Bone structure and strength QTL 964.9tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)45664777678882945Rat
4889972Bss97Bone structure and strength QTL 975.6tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)45664777678882945Rat
5685009Bmd86Bone mineral density QTL 863.7tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)45664777678882945Rat
5685012Bmd87Bone mineral density QTL 875.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)45664777678882945Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
634311Sach7Saccharin preference QTL 7taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)45711443281266970Rat
631546Bp86Blood pressure QTL 863.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711443291360801Rat
61336Bp21Blood pressure QTL 214.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711470578881294Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
1558651Swd3Spike wave discharge measurement QTL 34.620.000024brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)45843213392991462Rat
631671Iddm11Insulin dependent diabetes mellitus QTL 113.60.0012blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)45863587778886137Rat

Markers in Region
D4Wox41  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2459,170,176 - 59,170,307 (+)MAPPERmRatBN7.2
Rnor_6.0457,865,234 - 57,865,364NCBIRnor6.0
Rnor_5.0457,626,761 - 57,626,891UniSTSRnor5.0
RGSC_v3.4457,461,929 - 57,462,059UniSTSRGSC3.4
Celera454,269,080 - 54,269,210UniSTS
Cytogenetic Map4q22UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High 2
Medium 2 20 19 7 19 21
Low 1 32 35 20 9 20 8 9 74 31 20 11 8
Below cutoff 2 9 2 2 1 2 2 4

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001013083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039107280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063285740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063285741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063285742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC107243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC128293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH002149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF249031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF249075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF249156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF249511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ226028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S79837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000029608   ⟹   ENSRNOP00000038495
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl459,160,357 - 59,183,674 (+)Ensembl
Rnor_6.0 Ensembl457,855,416 - 57,879,239 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000120200   ⟹   ENSRNOP00000087337
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl459,162,873 - 59,183,674 (+)Ensembl
RefSeq Acc Id: NM_001013083   ⟹   NP_001013101
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8460,127,753 - 60,151,065 (+)NCBI
mRatBN7.2459,160,357 - 59,183,674 (+)NCBI
Rnor_6.0457,855,416 - 57,879,239 (+)NCBI
Rnor_5.0457,611,439 - 57,640,155 (+)NCBI
RGSC_v3.4457,452,111 - 57,475,357 (+)RGD
Celera454,259,278 - 54,282,148 (+)RGD
Sequence:
RefSeq Acc Id: XM_039107280   ⟹   XP_038963208
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8460,133,035 - 60,151,066 (+)NCBI
mRatBN7.2459,165,637 - 59,183,677 (+)NCBI
RefSeq Acc Id: XM_063285740   ⟹   XP_063141810
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8460,125,297 - 60,151,066 (+)NCBI
RefSeq Acc Id: XM_063285741   ⟹   XP_063141811
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8460,125,297 - 60,151,066 (+)NCBI
RefSeq Acc Id: XM_063285742   ⟹   XP_063141812
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8460,132,918 - 60,151,066 (+)NCBI
RefSeq Acc Id: NP_001013101   ⟸   NM_001013083
- Peptide Label: precursor
- UniProtKB: Q6LD54 (UniProtKB/Swiss-Prot),   P19222 (UniProtKB/Swiss-Prot),   G3V976 (UniProtKB/TrEMBL),   A6IEG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000038495   ⟸   ENSRNOT00000029608
RefSeq Acc Id: XP_038963208   ⟸   XM_039107280
- Peptide Label: isoform X3
- UniProtKB: A6IEG8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000087337   ⟸   ENSRNOT00000120200
RefSeq Acc Id: XP_063141810   ⟸   XM_063285740
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063141811   ⟸   XM_063285741
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063141812   ⟸   XM_063285742
- Peptide Label: isoform X2
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P19222-F1-model_v2 AlphaFold P19222 1-417 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692936
Promoter ID:EPDNEW_R3461
Type:multiple initiation site
Name:Cpa2_1
Description:carboxypeptidase A2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0457,855,399 - 57,855,459EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305563 AgrOrtholog
BioCyc Gene G2FUF-45350 BioCyc
Ensembl Genes ENSRNOG00000028092 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000029608 ENTREZGENE
  ENSRNOT00000029608.3 UniProtKB/TrEMBL
  ENSRNOT00000120200.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.340 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Zn peptidases UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CPA_M14_CPD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  M14A-like_propep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  M14A_act_pep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_M14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:296959 UniProtKB/TrEMBL
NCBI Gene 296959 ENTREZGENE
PANTHER CARBOXYPEPTIDASE A2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Peptidase_M14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Propep_M14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cpa2 PhenoGen
PRINTS CRBOXYPTASEA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE CARBOXYPEPT_ZN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CARBOXYPEPT_ZN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PEPTIDASE_M14 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000028092 RatGTEx
SMART Zn_pept UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Protease propeptides/inhibitors UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Zn-dependent exopeptidases UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I6GF15_RAT UniProtKB/TrEMBL
  A6IEG7 ENTREZGENE, UniProtKB/TrEMBL
  A6IEG8 ENTREZGENE, UniProtKB/TrEMBL
  CBPA2_RAT UniProtKB/Swiss-Prot
  G3V976 ENTREZGENE, UniProtKB/TrEMBL
  P19222 ENTREZGENE
  Q6LD54 ENTREZGENE
UniProt Secondary Q6LD54 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-02 Cpa2  carboxypeptidase A2  Cpa2  carboxypeptidase A2 (pancreatic)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Cpa2  carboxypeptidase A2 (pancreatic)   Cpa2_predicted  carboxypeptidase A2 (pancreatic) (predicted)  'predicted' is removed 2292626 APPROVED
2007-04-10 Cpa2_predicted  carboxypeptidase A2 (pancreatic) (predicted)  Cpa2_mapped  carboxypeptidase A2 (mapped)  Data merged from RGD:2389 737654 APPROVED
2005-11-17 Cpa2_mapped  carboxypeptidase A2 (mapped)  Cpa2  carboxypeptidase A2   Symbol and Name updated 1556543 APPROVED
2005-01-12 Cpa2_predicted  carboxypeptidase A2 (pancreatic) (predicted)      Symbol and Name status set to approved 70820 APPROVED
2002-11-06 Cpa2  carboxypeptidase A2     Carboxypeptidase A2 (pancreatic)  Name updated 625702 APPROVED
2002-06-10 Cpa2  Carboxypeptidase A2 (pancreatic)      Symbol and Name status set to approved 70586 APPROVED