Fam204a (family with sequence similarity 204, member A)

Gene: Fam204a (family with sequence similarity 204, member A) Rattus norvegicus

Analyze

Symbol:

Fam204a

Name:

family with sequence similarity 204, member A

RGD ID:

1305500

Description:

Orthologous to human FAM204A (family with sequence similarity 204 member A); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; azoxystrobin.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC308004; LOC308004; RGD1305500; similar to hypothetical protein FLJ13188; uncharacterized protein LOC308004

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	269,323,473 - 269,352,772 (-)	NCBI		GRCr8
mRatBN7.2	1	259,328,551 - 259,366,726 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	259,337,709 - 259,367,077 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	267,543,514 - 267,572,764 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	274,249,546 - 274,278,796 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	266,895,823 - 266,925,136 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	281,343,692 - 281,403,699 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	281,347,536 - 281,376,834 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	288,697,398 - 288,730,537 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	266,749,513 - 266,779,356 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	266,967,048 - 266,990,027 (-)	NCBI
Celera	1	254,985,319 - 255,014,612 (-)	NCBI		Celera
Cytogenetic Map	1	q55	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

afimoxifene (ISO)

aflatoxin B1 (ISO)

antirheumatic drug (ISO)

azoxystrobin (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

carbamazepine (ISO)

chlorpyrifos (EXP)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

gentamycin (EXP)

glyphosate (EXP)

imidacloprid (EXP)

methyl methanesulfonate (ISO)

Monobutylphthalate (EXP)

paracetamol (ISO)

perfluorononanoic acid (ISO)

phenylmercury acetate (ISO)

rotenone (EXP)

SB 431542 (ISO)

thiabendazole (EXP)

valproic acid (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Fam204a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	269,323,473 - 269,352,772 (-)	NCBI		GRCr8
mRatBN7.2	1	259,328,551 - 259,366,726 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	259,337,709 - 259,367,077 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	267,543,514 - 267,572,764 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	274,249,546 - 274,278,796 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	266,895,823 - 266,925,136 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	281,343,692 - 281,403,699 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	281,347,536 - 281,376,834 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	288,697,398 - 288,730,537 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	266,749,513 - 266,779,356 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	266,967,048 - 266,990,027 (-)	NCBI
Celera	1	254,985,319 - 255,014,612 (-)	NCBI		Celera
Cytogenetic Map	1	q55	NCBI

FAM204A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	118,297,925 - 118,342,324 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	118,297,925 - 118,342,328 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	120,057,437 - 120,101,836 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	120,058,562 - 120,091,808 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	120,058,561 - 120,091,808	NCBI
Celera	10	113,799,164 - 113,832,438 (-)	NCBI		Celera
Cytogenetic Map	10	q26.11	NCBI
HuRef	10	113,697,636 - 113,730,878 (-)	NCBI		HuRef
CHM1_1	10	120,352,610 - 120,385,891 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	119,192,932 - 119,237,311 (-)	NCBI		T2T-CHM13v2.0

Fam204a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	60,187,018 - 60,215,137 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	60,187,018 - 60,215,133 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	60,197,148 - 60,226,705 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	60,198,586 - 60,226,701 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	60,274,489 - 60,302,600 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	60,253,249 - 60,281,360 (-)	NCBI		MGSCv36	mm8
Celera	19	62,387,664 - 62,415,670 (-)	NCBI		Celera
Cytogenetic Map	19	D3	NCBI
cM Map	19	56.52	NCBI

Fam204a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	22,920,817 - 22,942,165 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	22,920,076 - 22,947,959 (-)	NCBI	ChiLan1.0	ChiLan1.0

FAM204A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	130,171,654 - 130,207,565 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	130,164,096 - 130,212,903 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	114,870,818 - 114,916,884 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	118,307,273 - 118,339,838 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	118,307,058 - 118,339,838 (-)	Ensembl	panpan1.1		panPan2

FAM204A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	28,697,347 - 28,730,725 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	28,697,409 - 28,730,698 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	28,840,348 - 28,873,987 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	29,226,710 - 29,260,365 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	29,224,196 - 29,260,917 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	28,786,904 - 28,820,533 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	28,802,226 - 28,835,875 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	28,997,532 - 29,031,177 (-)	NCBI		UU_Cfam_GSD_1.0

Fam204a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	17,582,047 - 17,613,953 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	7,945,154 - 7,980,007 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	7,947,350 - 7,979,167 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM204A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	128,365,916 - 128,402,560 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	128,366,152 - 128,402,587 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	139,880,728 - 139,917,161 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM204A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	111,112,988 - 111,145,411 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	111,112,027 - 111,145,771 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	72,375,858 - 72,408,591 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam204a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624737	28,372,668 - 28,401,806 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fam204a
103 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	559
Count of miRNA genes:	273
Interacting mature miRNAs:	335
Transcripts:	ENSRNOT00000013031
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	153136852	260522016	Rat
1578763	Kidm29	Kidney mass QTL 29	3.3	0.0001	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	1	179567751	260522016	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	199050459	259647894	Rat
1358890	Bp259	Blood pressure QTL 259	3.06		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	210702053	260522016	Rat
70211	Niddm24	Non-insulin dependent diabetes mellitus QTL 24	3.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	214647894	259647894	Rat
1549910	Bw54	Body weight QTL 54		0.05	body mass (VT:0001259)	body weight (CMO:0000012)	1	214647894	259647894	Rat
61327	Eae7	Experimental allergic encephalomyelitis QTL 7	5.6		body mass (VT:0001259)	change in body weight (CMO:0002045)	1	216255568	260522016	Rat
2302040	Pia35	Pristane induced arthritis QTL 35	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	216255568	260522016	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	221264111	259647894	Rat
10053715	Scort24	Serum corticosterone level QTL 24	2.13	0.0088	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	221414816	260522016	Rat
724552	Glom2	Glomerulus QTL 2	3.3	0.0001	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	1	222363780	260522016	Rat
1600392	Bw123	Body weight QTL 123		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	223201027	260522016	Rat
734767	Niddm57	Non-insulin dependent diabetes mellitus QTL 57			body mass (VT:0001259)	body weight (CMO:0000012)	1	224054293	260122809	Rat
631843	Bw116	Body weight QTL 116	4.1	0.016	abdominal adipose amount (VT:1000220)	abdominal fat pad weight (CMO:0000088)	1	224054293	260122809	Rat
734769	Niddm58	Non-insulin dependent diabetes mellitus QTL 58			body mass (VT:0001259)	body weight (CMO:0000012)	1	224569538	260122809	Rat
631215	Stl8	Serum triglyceride level QTL 8	9.27	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	1	225126575	260522016	Rat
1300108	Rf8	Renal function QTL 8	3.75		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	1	228581588	259647894	Rat
1581544	Rf52	Renal function QTL 52		0.05	urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	1	232156370	259647894	Rat
631536	Lnnr2	Liver neoplastic nodule remodeling QTL 2	2.9	0.0005	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	1	233948574	260522016	Rat
631690	Scl5	Serum cholesterol level QTL 5	2.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	236125214	260522016	Rat
631836	Stl31	Serum triglyceride level QTL 31	4.64	0.00000487	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	1	237147813	260522016	Rat
631837	Niddm35	Non-insulin dependent diabetes mellitus QTL 35		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	238699859	259647894	Rat
737975	Bw122	Body weight QTL 122	9.11	0.005	body mass (VT:0001259)	body weight (CMO:0000012)	1	258843780	260122809	Rat

Markers in Region

RH143414

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	259,338,687 - 259,339,269 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	281,348,797 - 281,349,378	NCBI	Rnor6.0
Rnor_5.0	1	288,702,500 - 288,703,081	UniSTS	Rnor5.0
Celera	1	254,986,580 - 254,987,161	UniSTS
Cytogenetic Map	1	q55	UniSTS

RH141671

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	259,339,048 - 259,339,230 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	281,349,158 - 281,349,339	NCBI	Rnor6.0
Rnor_5.0	1	288,702,861 - 288,703,042	UniSTS	Rnor5.0
Celera	1	254,986,941 - 254,987,122	UniSTS
RH 3.4 Map	1	1704.2	UniSTS
Cytogenetic Map	1	q55	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		8	19	6	17	6	3	3	74	25	35	11	3
Low	3	35	38	35	2	35	5	8		10	6		5
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000013031 ⟹ ENSRNOP00000013031

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	259,337,709 - 259,367,077 (-)	Ensembl
Rnor_6.0 Ensembl	1	281,347,536 - 281,376,834 (-)	Ensembl

RefSeq Acc Id:

NM_001107448 ⟹ NP_001100918

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	269,323,473 - 269,352,772 (-)	NCBI
mRatBN7.2	1	259,337,427 - 259,366,726 (-)	NCBI
Rnor_6.0	1	281,347,536 - 281,376,834 (-)	NCBI
Rnor_5.0	1	288,697,398 - 288,730,537 (-)	NCBI
RGSC_v3.4	1	266,749,513 - 266,779,356 (-)	RGD
Celera	1	254,985,319 - 255,014,612 (-)	NCBI

Sequence:

show sequence

TCCCGGTGCGGATTCTGACAGGGCTCGAGAGCTGAAGGTGGCGCGGCCTCCCACCCGGCGAGGC
GGCAGAGTTCCAGGTTGCCGGCCCGGGTCGAGCGGGAAGGGGTGTGCCTTTTAAAGCCATCCTC
TCAGTCTTGAACTTTAAGAAAAGATGTGGAGTGGGCTGTTACCTCCTGGACTAAATGAGAGCGA
TGTTGAGTCAGATTCTGAAGATGAAATCACACTGGAGAACCCAGAGCCTTCAGAACATAATTCA
CAGGAAGATGGAGAGGCTGGCAGCAATAAGGGACCAGCAGTGTCAGACTGCCCAGCAGGCCAGC
CAGAGATGGGGACACAGACTGGTGCAGATGCAGATGCATATGAGAAGTGTCCTTCTGGGATTCC
CCTGAACATGTGGAATAAATTTCAAGAATTGCATAAAAAAAATTCTGAACAGAAAAATTCAACG
CCAAGATTCAGACAGAAAAAAAGAAAACGCTCCAAAAAAGGCAAATCGAAGAGTGAAAAGGAGT
CTTCCAGCGAGCAGTCCTCAAGTGAGACCCAGTGGAAAGAGCTTACTCAGTATTTTGGAGCCAA
TGATAGATTTGAACCCCCAGTTAAACAGAAAAAAGTGGAAAAGTCAGGCCTTGAGAAGAGCATT
GACCAGGCTGTGGAGGAGTGGGATGTTGAGAAGGCTGAGGAGCTCAGCAACCAGCTAGCTACTC
GAGAGCTTGGTGTAAAAATTGCCAAAGCAATTGCCTGCCACAAGTTTGTTAAAGCCAAAAAGGA
GGCTGAAAATTCACAGGCTGCTCGAAAGAAGAAGAAACTGGCGTGGGGGTTTGAAGCAAAGAAG
AGATGGGAAACCAAAAGCAACATGGGCTATATGTGACCTTGCAGAGTTCTTCAAGACATTTATT
TATAGCTGTCATGCTTCATTTGCTGAAAAGATTTTCTGGGTTGGGTTAAATATGTCAGGAAATT
GATAAAGTTAGAAAAAGATAAGCATAAAACTTCAGAGCTGATCATAAACCCTTCAATCTGTTTT
CTCAGAAGTTTTTGATGGAAAAGAACATTTTTATATTTTTGTAAGAAAGTTAAGCATATGTACA
AGAAAAAAAGATAGGTATTTATTTGTTTGTATAAACATACAGTTTAAGATCAATTTTGTGTTTG
ATCTGTTTGGTCTAGCATAGCCTGTGAGGTCCTTCGACTTCCTTATCTGTTCTTAGCATGACTG
TACTTTTTCTAGGATTGTGTTTTTAAGATTGGCTTTGTTTATAATGGATTAGTCATAAATAGTT
TTTCAAGTTACTGATTTTACAAATGACTTTAGTTACTTTAATGCATTAAATATAATTATTGCTT
CTTTTTGGAGGTAAAAGTAATATTACTTAGTCACATAGTAAGAGCAGTTGATTAATTTTTTTGT
GCAGTGTTAGTGCAAATAATTAGAGTAAAAGGTGAACATACTATATTATTTGGATAATGATTTA
AATTCAGATTTGCCTAGAAAATACCTTTCTCAATATCTCTCAACAATGTGTTTCTTTATGTTAT
GATTGTTTATGAAAAGGAAATGGTCTGGTTGTGCTAGACAGACAGTTGTAACTCAAGATAACAT
AACTTTGGATTGTCTAAGTGATTGTTTGTTTTAACCCCTTCTCCTGGAAACTCTTTGAAAGATG
GAATGAATTAATGAGACAAAAGAGAGAACTGATACCTGGGAAGTCACTGTCCTTAGGTGTGTGT
TTATAGTCCTAAGGGGAAGAGGTTTTAGAAGTCATTTGATAACTAGCAAGACCATATGTGGATA
TGTGAGAAGTGAGTCATGAACATGATTGTATCATTTTAGACTTAAAATAGTCACTGTTTTATTA
ACATATGGTGTTATGAAAATTTTCTCTATATGAAGAGTAAGTGGGTAATTAAGAGCCCAAAAAT
CGGGGGTTGGAGAGAGCTAGCTCAGCTGTTAAGAGCACTGAATGTTCATCTAGAGATCCTGAAT
TCAGTTCCCAGCAACCACACGGTGGCTCACAACCATTTGTAATGAGATCTGATGTCTTCTTCTA
GTGTGTCTGAAGACAGCTCCAATGTACTCATATAAATAAAATAAGACCTAGGGAGCCAATGAGT
GTT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100918	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL94569	(Get FASTA)	NCBI Sequence Viewer
	EDL94570	(Get FASTA)	NCBI Sequence Viewer
	EDL94571	(Get FASTA)	NCBI Sequence Viewer
	EDL94572	(Get FASTA)	NCBI Sequence Viewer
	EDL94573	(Get FASTA)	NCBI Sequence Viewer
	EDL94574	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000013031
	ENSRNOP00000013031.5

RefSeq Acc Id:

NP_001100918 ⟸ NM_001107448

- UniProtKB:

D4A037 (UniProtKB/TrEMBL), A6JI98 (UniProtKB/TrEMBL), A6JI97 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MWSGLLPPGLNESDVESDSEDEITLENPEPSEHNSQEDGEAGSNKGPAVSDCPAGQPEMGTQTG
ADADAYEKCPSGIPLNMWNKFQELHKKNSEQKNSTPRFRQKKRKRSKKGKSKSEKESSSEQSSS
ETQWKELTQYFGANDRFEPPVKQKKVEKSGLEKSIDQAVEEWDVEKAEELSNQLATRELGVKIA
KAIACHKFVKAKKEAENSQAARKKKKLAWGFEAKKRWETKSNMGYM

hide sequence

RefSeq Acc Id:

ENSRNOP00000013031 ⟸ ENSRNOT00000013031

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A037-F1-model_v2	AlphaFold	D4A037	1-238	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305500	AgrOrtholog
BioCyc Gene	G2FUF-55233	BioCyc
Ensembl Genes	ENSRNOG00000009830	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000013031	ENTREZGENE
	ENSRNOT00000013031.7	UniProtKB/TrEMBL
InterPro	FAM204A	UniProtKB/TrEMBL
KEGG Report	rno:308004	UniProtKB/TrEMBL
NCBI Gene	308004	ENTREZGENE
PANTHER	PROTEIN FAM204A	UniProtKB/TrEMBL
	PTHR14386	UniProtKB/TrEMBL
PhenoGen	Fam204a	PhenoGen
RatGTEx	ENSRNOG00000009830	RatGTEx
UniProt	A6JI97	ENTREZGENE, UniProtKB/TrEMBL
	A6JI98	ENTREZGENE, UniProtKB/TrEMBL
	D4A037	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-01	Fam204a	family with sequence similarity 204, member A	RGD1305500	similar to hypothetical protein FLJ13188	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1305500	similar to hypothetical protein FLJ13188	RGD1305500_predicted	similar to hypothetical protein FLJ13188 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1305500_predicted	similar to hypothetical protein FLJ13188 (predicted)	LOC308004_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC308004_predicted	similar to hypothetical protein FLJ13188 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar