Gene: Clcn6 (chloride voltage-gated channel 6) Rattus norvegicus
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Symbol: Clcn6
Name: chloride voltage-gated channel 6
Description: INVOLVED IN response to mechanical stimulus; FOUND IN lysosomal membrane (ortholog); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chloride channel 6; chloride channel, voltage-sensitive 6; chloride transport protein 6; LOC295586
Orthologs:
Homo sapiens (human) : CLCN6 (chloride voltage-gated channel 6)  HGNC  AGR
Mus musculus (house mouse) : Clcn6 (chloride channel, voltage-sensitive 6)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Clcn6 (chloride voltage-gated channel 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CLCN6 (chloride voltage-gated channel 6)
Canis lupus familiaris (dog) : CLCN6 (chloride voltage-gated channel 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clcn6 (chloride voltage-gated channel 6)
more info ...
Allele / Splice: Clcn6em2Mcwi  
Genetic Models: SS-Clcn6em2Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05164,811,815 - 164,844,554 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05168,469,718 - 168,502,323 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45165,079,773 - 165,110,594 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15165,090,327 - 165,120,752 (-)NCBI
Celera5156,716,141 - 156,746,803 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clcn6
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305379
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE