Tma16 (translation machinery associated 16 homolog) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Tma16 (translation machinery associated 16 homolog) Rattus norvegicus
Analyze
Symbol: Tma16
Name: translation machinery associated 16 homolog
RGD ID: 1305222
Description: Predicted to enable preribosome binding activity. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to be located in nucleolus and nucleoplasm. Predicted to be active in nucleus. Orthologous to human TMA16 (translation machinery associated 16 homolog); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC290686; LOC290686; RGD1305222; similar to RIKEN cDNA 1810029B16; translation machinery associated 16 homolog (S. cerevisiae); translation machinery-associated protein 16; uncharacterized protein LOC290686
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81628,003,002 - 28,021,875 (+)NCBIGRCr8
mRatBN7.21623,236,686 - 23,252,706 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1623,236,710 - 23,252,701 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1626,600,245 - 26,616,118 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01630,034,957 - 30,050,830 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01625,973,554 - 25,989,442 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01624,978,429 - 24,997,286 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1624,978,527 - 24,997,006 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01624,862,100 - 24,880,952 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41624,948,510 - 24,964,415 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11624,948,468 - 24,964,413 (+)NCBI
Celera1623,353,072 - 23,368,380 (+)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
nucleolus  (ISO)
nucleoplasm  (ISO)
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12947022   PMID:21630459  


Genomics

Comparative Map Data
Tma16
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81628,003,002 - 28,021,875 (+)NCBIGRCr8
mRatBN7.21623,236,686 - 23,252,706 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1623,236,710 - 23,252,701 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1626,600,245 - 26,616,118 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01630,034,957 - 30,050,830 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01625,973,554 - 25,989,442 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01624,978,429 - 24,997,286 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1624,978,527 - 24,997,006 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01624,862,100 - 24,880,952 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41624,948,510 - 24,964,415 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11624,948,468 - 24,964,413 (+)NCBI
Celera1623,353,072 - 23,368,380 (+)NCBICelera
Cytogenetic Map16p14NCBI
TMA16
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384163,494,690 - 163,520,539 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4163,494,442 - 163,520,539 (+)EnsemblGRCh38hg38GRCh38
GRCh374164,415,842 - 164,441,691 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364164,635,123 - 164,661,141 (+)NCBINCBI36Build 36hg18NCBI36
Celera4161,747,938 - 161,773,962 (+)NCBICelera
Cytogenetic Map4q32.2NCBI
HuRef4160,169,554 - 160,195,568 (+)NCBIHuRef
CHM1_14164,392,123 - 164,418,141 (+)NCBICHM1_1
T2T-CHM13v2.04166,842,563 - 166,868,413 (+)NCBIT2T-CHM13v2.0
Tma16
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39866,928,995 - 66,939,182 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl866,925,770 - 66,939,182 (-)EnsemblGRCm39 Ensembl
GRCm38866,476,343 - 66,486,530 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl866,473,118 - 66,486,530 (-)EnsemblGRCm38mm10GRCm38
MGSCv37869,000,245 - 69,010,406 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36869,405,335 - 69,415,496 (-)NCBIMGSCv36mm8
Celera869,032,446 - 69,042,622 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
cM Map833.14NCBI
Tma16
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540341,493,413 - 41,510,183 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540341,493,624 - 41,510,162 (-)NCBIChiLan1.0ChiLan1.0
TMA16
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23161,309,969 - 161,336,250 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14161,670,138 - 161,698,713 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04155,760,991 - 155,787,410 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14167,549,482 - 167,575,665 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4167,549,943 - 167,575,167 (+)Ensemblpanpan1.1panPan2
TMA16
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11559,720,318 - 59,751,236 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1559,719,633 - 59,750,553 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1560,085,103 - 60,119,190 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01560,479,568 - 60,513,614 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1560,479,635 - 60,509,857 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11559,712,916 - 59,746,653 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01559,804,119 - 59,837,895 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01560,173,264 - 60,207,047 (+)NCBIUU_Cfam_GSD_1.0
Tma16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494316,452,153 - 16,469,248 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365552,102,183 - 2,118,365 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365552,100,958 - 2,118,340 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMA16
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl852,343,233 - 52,375,044 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1852,343,207 - 52,371,367 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2855,470,791 - 55,498,960 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMA16
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17109,944,195 - 109,970,599 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7109,944,567 - 109,970,593 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603789,768,650 - 89,794,813 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tma16
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475813,326,356 - 13,345,246 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tma16
113 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:25
Count of miRNA genes:24
Interacting mature miRNAs:25
Transcripts:ENSRNOT00000019363
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat

Markers in Region
AI137380  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21623,252,408 - 23,252,590 (+)MAPPERmRatBN7.2
Rnor_6.01626,071,675 - 26,071,856NCBIRnor6.0
Rnor_6.01624,994,427 - 24,994,608NCBIRnor6.0
Rnor_5.01625,957,381 - 25,957,562UniSTSRnor5.0
Rnor_5.01624,878,093 - 24,878,274UniSTSRnor5.0
RGSC_v3.41624,964,123 - 24,964,304UniSTSRGSC3.4
Celera1623,368,088 - 23,368,269UniSTS
RH 3.4 Map16278.31UniSTS
Cytogenetic Map16p14UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 4 12 12 12 28 12 26
Low 3 39 45 29 19 29 8 11 46 23 15 11 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000019363   ⟹   ENSRNOP00000019363
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1623,236,710 - 23,252,697 (+)Ensembl
Rnor_6.0 Ensembl1624,978,527 - 24,994,718 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000082142   ⟹   ENSRNOP00000069283
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1624,980,723 - 24,997,006 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000111818   ⟹   ENSRNOP00000090655
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1623,236,732 - 23,252,701 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000115829   ⟹   ENSRNOP00000079522
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1623,241,005 - 23,252,701 (+)Ensembl
RefSeq Acc Id: NM_001169102   ⟹   NP_001162573
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81628,003,405 - 28,019,309 (+)NCBI
mRatBN7.21623,236,797 - 23,252,701 (+)NCBI
Rnor_6.01624,978,815 - 24,994,719 (+)NCBI
Rnor_5.01624,862,100 - 24,880,952 (+)NCBI
RGSC_v3.41624,948,510 - 24,964,415 (+)RGD
Celera1623,353,072 - 23,368,380 (+)RGD
Sequence:
RefSeq Acc Id: XM_017600038   ⟹   XP_017455527
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81628,003,002 - 28,021,875 (+)NCBI
mRatBN7.21623,236,894 - 23,252,706 (+)NCBI
Rnor_6.01624,978,870 - 24,997,286 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001162573 (Get FASTA)   NCBI Sequence Viewer  
  XP_017455527 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL75964 (Get FASTA)   NCBI Sequence Viewer  
  EDL75965 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000019363
  ENSRNOP00000019363.5
  ENSRNOP00000079522.1
  ENSRNOP00000090655.1
Reference Protein Sequences
RefSeq Acc Id: NP_001162573   ⟸   NM_001169102
- UniProtKB: D4AAG0 (UniProtKB/TrEMBL),   A0A8I6AC99 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455527   ⟸   XM_017600038
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AC99 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000069283   ⟸   ENSRNOT00000082142
RefSeq Acc Id: ENSRNOP00000019363   ⟸   ENSRNOT00000019363
RefSeq Acc Id: ENSRNOP00000079522   ⟸   ENSRNOT00000115829
RefSeq Acc Id: ENSRNOP00000090655   ⟸   ENSRNOT00000111818

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4AAG0-F1-model_v2 AlphaFold D4AAG0 1-221 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305222 AgrOrtholog
BioCyc Gene G2FUF-11657 BioCyc
Ensembl Genes ENSRNOG00000014188 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019363 ENTREZGENE
  ENSRNOT00000019363.8 UniProtKB/TrEMBL
  ENSRNOT00000111818.1 UniProtKB/TrEMBL
  ENSRNOT00000115829.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1440.170 UniProtKB/TrEMBL
InterPro DUF2962 UniProtKB/TrEMBL
  Tma16_sf UniProtKB/TrEMBL
KEGG Report rno:290686 UniProtKB/TrEMBL
NCBI Gene 290686 ENTREZGENE
PANTHER PTHR13349 UniProtKB/TrEMBL
  TRANSLATION MACHINERY-ASSOCIATED PROTEIN 16 UniProtKB/TrEMBL
Pfam DUF2962 UniProtKB/TrEMBL
PhenoGen Tma16 PhenoGen
RatGTEx ENSRNOG00000014188 RatGTEx
UniProt A0A8I5ZN04_RAT UniProtKB/TrEMBL
  A0A8I6AC99 ENTREZGENE, UniProtKB/TrEMBL
  A6KFM2_RAT UniProtKB/TrEMBL
  D4AAG0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-10-01 Tma16  translation machinery associated 16 homolog  Tma16  translation machinery associated 16 homolog (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-10 Tma16  translation machinery associated 16 homolog (S. cerevisiae)  RGD1305222  similar to RIKEN cDNA 1810029B16  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1305222  similar to RIKEN cDNA 1810029B16   RGD1305222_predicted  similar to RIKEN cDNA 1810029B16 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-20 RGD1305222_predicted  similar to RIKEN cDNA 1810029B16 (predicted)  LOC290686_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC290686_predicted  similar to RIKEN cDNA 1810029B16 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL