Rhbdf1 (rhomboid 5 homolog 1) - Rat Genome Database

Name: Rhbdf1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Rhbdf1 (rhomboid 5 homolog 1) Rattus norvegicus

Analyze

Symbol:

Rhbdf1

Name:

rhomboid 5 homolog 1

RGD ID:

1305075

Description:

Predicted to enable growth factor binding activity. Predicted to be involved in several processes, including negative regulation of protein secretion; regulation of epidermal growth factor receptor signaling pathway; and regulation of proteasomal protein catabolic process. Predicted to be located in Golgi membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human RHBDF1 (rhomboid 5 homolog 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4-amino-2,6-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

inactive rhomboid protein 1; iRhom1; LOC303008; MGC124815; rhomboid 5 homolog 1 (Drosophila); rhomboid family 1; rhomboid family 1 (Drosophila); rhomboid family member 1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RHBDF1 (rhomboid 5 homolog 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RHBDF1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RHBDF1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RHBDF1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RHBDF1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rhbdf1 (rhomboid 5 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	RHBDF1 (rhomboid 5 homolog 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rhbdf1 (rhomboid 5 homolog 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rhbdf1b (rhomboid 5 homolog 1b (Drosophila))	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	rhbdf1a (rhomboid 5 homolog 1a (Drosophila))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rom-3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	rho-5	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rom-4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rhbdf1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	15,911,282 - 15,924,214 (+)	NCBI		GRCr8
mRatBN7.2	10	15,406,832 - 15,419,765 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	15,406,859 - 15,419,763 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	20,152,893 - 20,165,784 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	19,641,781 - 19,654,677 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	15,134,664 - 15,147,558 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	15,672,370 - 15,685,285 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	15,672,382 - 15,685,284 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	15,567,515 - 15,580,428 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	15,653,948 - 15,666,851 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	15,661,089 - 15,667,673 (+)	NCBI
Celera	10	15,074,361 - 15,087,252 (+)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Wolff-Parkinson-White syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methylcholine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4-amino-2,6-dinitrotoluene (EXP)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

afimoxifene (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dibutyl phthalate (ISO)

diethylstilbestrol (ISO)

disulfiram (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

Enterolactone (ISO)

estrone (ISO)

ethanol (ISO)

fenthion (ISO)

fenvalerate (EXP)

FR900359 (ISO)

fulvestrant (ISO)

genistein (ISO)

indometacin (ISO)

mestranol (ISO)

methamphetamine (EXP)

methidathion (ISO)

N-methyl-4-phenylpyridinium (ISO)

N-nitrosodiethylamine (ISO)

ozone (ISO)

paracetamol (ISO)

pentachlorophenol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

raloxifene (ISO)

resveratrol (ISO)

rotenone (ISO)

SB 431542 (ISO)

SCH 23390 (EXP)

sodium arsenite (ISO)

sodium dodecyl sulfate (ISO)

sunitinib (ISO)

tetrachloromethane (EXP,ISO)

thapsigargin (ISO)

thioacetamide (EXP)

trichostatin A (ISO)

trovafloxacin (ISO)

tunicamycin (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell migration (ISO,ISS)

cell population proliferation (ISO,ISS)

negative regulation of protein secretion (ISO,ISS)

protein transport (IEA)

regulation of epidermal growth factor receptor signaling pathway (IBA,ISO,ISS)

regulation of proteasomal protein catabolic process (ISO,ISS)

regulation of protein secretion (IBA,ISO)

Cellular Component

endoplasmic reticulum membrane (IBA,ISO,ISS)

Golgi membrane (ISO,ISS)

Molecular Function

growth factor binding (IEA)

protein binding (ISO)

serine-type endopeptidase activity (IBA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:18832597	PMID:21439629

Genomics

Comparative Map Data

Rhbdf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	15,911,282 - 15,924,214 (+)	NCBI		GRCr8
mRatBN7.2	10	15,406,832 - 15,419,765 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	15,406,859 - 15,419,763 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	20,152,893 - 20,165,784 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	19,641,781 - 19,654,677 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	15,134,664 - 15,147,558 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	15,672,370 - 15,685,285 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	15,672,382 - 15,685,284 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	15,567,515 - 15,580,428 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	15,653,948 - 15,666,851 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	15,661,089 - 15,667,673 (+)	NCBI
Celera	10	15,074,361 - 15,087,252 (+)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

RHBDF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	58,059 - 76,360 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	58,059 - 76,355 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	108,058 - 122,629 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	48,058 - 62,591 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	48,058 - 62,591	NCBI
Celera	16	309,954 - 324,535 (-)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	26,451 - 41,032 (-)	NCBI		HuRef
CHM1_1	16	107,996 - 122,575 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	51,596 - 69,903 (-)	NCBI		T2T-CHM13v2.0

Rhbdf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	32,159,585 - 32,172,339 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	32,159,585 - 32,172,300 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	32,209,585 - 32,222,331 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	32,209,585 - 32,222,300 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	32,109,585 - 32,122,293 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	32,109,585 - 32,122,238 (-)	NCBI		MGSCv36	mm8
Celera	11	34,626,680 - 34,639,569 (-)	NCBI		Celera
Cytogenetic Map	11	A4	NCBI
cM Map	11	18.83	NCBI

Rhbdf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	17,078,864 - 17,098,999 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	17,090,962 - 17,098,068 (+)	NCBI	ChiLan1.0	ChiLan1.0

RHBDF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	273,273 - 291,700 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	4,065,373 - 4,083,718 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	16	49,031 - 57,211 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	49,031 - 57,222 (-)	Ensembl	panpan1.1		panPan2

RHBDF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	40,394,654 - 40,413,619 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	40,395,517 - 40,413,606 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	41,652,775 - 41,676,636 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	40,732,787 - 40,756,647 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	40,739,139 - 40,756,645 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	40,420,352 - 40,444,203 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	40,381,279 - 40,405,130 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	40,860,455 - 40,884,315 (+)	NCBI		UU_Cfam_GSD_1.0

Rhbdf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	112,705,206 - 112,712,074 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	803,005 - 813,367 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	802,728 - 810,375 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RHBDF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	41,560,915 - 41,567,593 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	41,548,440 - 41,567,596 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	40,869,445 - 40,888,436 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RHBDF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	14,935 - 34,991 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	13,071 - 21,883 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	31,194,498 - 31,209,982 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rhbdf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624913	937,484 - 954,428 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624913	937,484 - 954,458 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rhbdf1
53 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	126
Count of miRNA genes:	95
Interacting mature miRNAs:	101
Transcripts:	ENSRNOT00000027965
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
634329	Pia15	Pristane induced arthritis QTL 15	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	1	24158324	Rat
2293680	Bss40	Bone structure and strength QTL 40	5.66	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	10	1	35225947	Rat
634327	Hc4	Hypercalciuria QTL 4	2.4		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	10	1	38328221	Rat
7411611	Foco17	Food consumption QTL 17	18.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	1	42315980	Rat
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1	80676123	Rat
10401803	Kidm50	Kidney mass QTL 50			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	10	418344	45418344	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	743364	63851208	Rat
1576304	Schws7	Schwannoma susceptibility QTL 7		0.0115	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	4765527	19816042	Rat
631828	Alc5	Alcohol consumption QTL 5	2.4		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	10	5144027	17245662	Rat
737820	Alc9	Alcohol consumption QTL 9	2.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	10	5144027	19233348	Rat
2313064	Bmd71	Bone mineral density QTL 71	0.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	10	5387014	50387014	Rat
2313066	Bss63	Bone structure and strength QTL 63	1.4	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	10	5387014	50387014	Rat
2313081	Bss64	Bone structure and strength QTL 64	1.3	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	10	5387014	50387014	Rat
2313095	Bss62	Bone structure and strength QTL 62	1.5	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	5387014	50387014	Rat
2313104	Bss61	Bone structure and strength QTL 61	0.9	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	10	5387014	50387014	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	10	5801990	62146030	Rat
631660	Hcar1	Hepatocarcinoma resistance QTL 1	3.4	0.0001	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	10	6154182	15990232	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6154182	73453136	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6357896	96121100	Rat
1578761	Stresp21	Stress response QTL 21	3.3		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	6375746	51375746	Rat
2303118	Mamtr7	Mammary tumor resistance QTL 7		0.003	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	9658275	104670812	Rat
9590310	Scort19	Serum corticosterone level QTL 19	6.3	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	11474010	56474010	Rat
9590268	Scort13	Serum corticosterone level QTL 13	3.26	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	11474010	56474010	Rat
9589136	Insul27	Insulin level QTL 27	10.46	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	10	11474010	56474010	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14487011	89062041	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14487011	104060283	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14487011	107057807	Rat
1354587	Kidm21	Kidney mass QTL 21	3.3		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	10	15028513	60430477	Rat
631564	Apr3	Acute phase response QTL 3	3.9		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	10	15275955	60275955	Rat

Markers in Region

REN94523

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	15,418,643 - 15,418,890 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	15,684,165 - 15,684,411	NCBI	Rnor6.0
Rnor_5.0	10	15,579,308 - 15,579,554	UniSTS	Rnor5.0
RGSC_v3.4	10	15,665,731 - 15,665,977	UniSTS	RGSC3.4
Celera	10	15,086,132 - 15,086,378	UniSTS
Cytogenetic Map	10	q12	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	34	6	6		6		2	41	29	32	11
Low		9	51	35	19	35	8	9	33	6	9		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001030034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085878	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC096051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC099777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000027965 ⟹ ENSRNOP00000027965

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	15,406,859 - 15,419,763 (+)	Ensembl
Rnor_6.0 Ensembl	10	15,672,382 - 15,685,284 (+)	Ensembl

RefSeq Acc Id:

NM_001030034 ⟹ NP_001025205

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,911,311 - 15,924,214 (+)	NCBI
mRatBN7.2	10	15,406,859 - 15,419,764 (+)	NCBI
Rnor_6.0	10	15,672,382 - 15,685,285 (+)	NCBI
Rnor_5.0	10	15,567,515 - 15,580,428 (+)	NCBI
RGSC_v3.4	10	15,653,948 - 15,666,851 (+)	RGD
Celera	10	15,074,361 - 15,087,252 (+)	RGD

Sequence:

show sequence

CCCAGGCGGACGGGCCGGGCCGGCGCGCGGGCGCAGGCAGGGACTAGGCGCGGGCGCCCTCCCG
GCCGGCGGCGGCAGCCGGTGCAGACCCCTCCGAGGACCCTGCGGCGGCCTGTCTCACTGCACCC
GGAACCATGAGCGAAGCCCGGAGAGACAGTACTAGCAGTCTGCAACGCAAGAAACCCCCGTGGC
TCAAGTTGGACATCCCAGCTGTGGTGCCCCCAGCAGCAGAAGAGCCCAGCTTCCTGCAGCCCCT
GCGGCGACAGGCTTTCCTGCGGAGTGTGAGTATGCCGGCTGAGACAGCCCGTGTCCCGTCACCC
CACCATGAGCCTCGGCGGCTGGCGCTGCAGCGTCAGACATCCATCACGCAGACCATCCGCAGGG
GGACAGCTGACTGGTTTGGAGTGAGCAAGGACAGTGACAGCACCCAGAAGTGGCAGCGTAAGAG
CATCCGTCACTGCAGCCAGCGATATGGGAAGCTAAAGCCACAGGTCATCCGGGAGCTGGACCTG
CCCAGCCAGGACAATGTGTCGCTGACCAGCACTGAGACACCGCCTCCACTCTATGTGGGGCCAT
GCCAGCTGGGAATGCAGAAGATCATAGACCCTCTGGCCCGAGGCCGGGCCTTCCGCATGGCCGA
TGACACCGCCGATGGCCTGAGTGCCCCCCACACTCCCGTCACACCAGGTGCTGCCTCCCTCTGT
TCCTTCTCCAGCTCCCGCTCAGGTTTCAACCGGCTCCCTCGGCGTCGCAAACGTGAATCCGTGG
CCAAGATGAGCTTCCGGGCCGCTGCAGCGCTGGTGAAGGGTCGGTCTATTAGGGATGGCACTTT
ACGAAGGGGACAGCGTCGGAGCTTTACTCCTGCCAGCTTCCTGGAGGAAGACATGGTGGACTTC
CCTGATGAGCTGGATACATCTTTCTTTGCCCGGGAAGGTGTCCTCCATGAGGAGCTGTCCACGT
ACCCAGATGAGGTGTTTGAGTCCCCATCAGAAGCAGCGCTCAAGGACTGGGAGAAAGCCCCGGA
TCAGGCAGACCTTACGGGTGGGGCCCTGGACCGCAGCGAGCTCGAGCGAAGCCACTTGATGTTA
CCCCTGGAACGAGGCTGGAGGAAGCAGAAGGAAGGCGGCACGCTAGCCCCGCAGCCCAAGGTGC
GGCTTCGCCAGGAGGTGGTCAGTGCGGCTGGCCCCAGGAGGGGTCAGCGTATCGCTGTGCCAGT
GCGCAAGCTCTTCGCCCGGGAAAAACGGCCGTATGGTCTGGGGATGGTGGGACGGCTCACCAAC
CGCACGTACCGGAAACGGATTGACAGCTACGTCAAGCGGCAGATAGAAGACATGGATGATCACA
GGCCCTTCTTCACTTACTGGCTCACCTTCGTGCACTCCCTGGTCACCATTCTGGCTGTGTGTAT
CTACGGCATCGCGCCTGTGGGCTTCTCGCAGCACGAGACGGTGGACTCGGTACTTCGGAAGCGG
GGTGTCTATGAGAATGTCAAATACGTCCAGCAGGAGAACTTCTGGATTGGCCCCAGCTCGGAGG
CCCTCATTCACCTGGGTGCCAAGTTCTCCCCCTGCATGCGCCAGGACCCACAGGTGCACAACTT
TATCCTTGCTGCCCGGGAGCGTGAAAAGCACTCAGCCTGCTGTGTGCGCAATGACCGGTCTGGC
TGTGTGCAGACGTCGAAGGAGGAGTGCTCGTCTACGTTGGCAGTGTGGGTGAAGTGGCCGGTTC
ATCCTAGTGCTCCCGACCTGGCAGGCAACAAGAGGCAGTTTGGTTCTGTCTGCCACCAGGACCC
CAGGGTGTGTGATGAGCCTTCCTCTGAGGATCCCCACGAGTGGCCAGAAGATATCACCAAGTGG
CCGATCTGCACCAAAAACAGCGCGGGGAACCACACTAACCACCCTCACATGGACTGTGTCATAA
CGGGCAGGCCCTGCTGCATCGGCACCAAGGGCAGGTGTGAGATCACCTCCCGGGAGTACTGTGA
CTTCATGAAGGGCTACTTCCATGAGGAGGCCACACTCTGCTCTCAGGTGCACTGCATGGACGAT
GTCTGTGGCCTCCTGCCTTTCCTCAATCCCGAGGTGCCTGACCAGTTCTACCGCCTGTGGCTGT
CCCTCTTCCTGCACGCTGGGATCCTGCACTGTTTGGTGTCCGTCTGCTTCCAGATGACGGTCCT
GCGGGACCTGGAGAAGCTGGCAGGCTGGCACCGCATAGCCATCATCTACCTGCTGAGCGGTGTC
ACGGGCAATCTAGCCAGCGCCATCTTTCTGCCGTACCGGGCAGAGGTAGGTCCGGCCGGCTCCC
AGTTTGGTATCCTGGCCTGTCTCTTTGTGGAGCTATTCCAGAGCTGGCAGATCCTGGCCCGACC
CTGGCGTGCCTTCTTCAAGCTCCTGGCCGTGGTGCTCTTCCTCTTTGCCTTTGGGCTGCTGCCC
TGGATCGACAACTTCGCCCACATCTCAGGTTTCGTCAGCGGCCTCTTCCTTTCCTTTGCCTTCC
TGCCTTACATCAGCTTTGGCAAGTTCGACCTGTACCGCAAGCGTTGCCAGATCATCATCTTCCA
GGCCGTCTTCCTGGGCCTGCTGGCCGGCCTGGTGGTCCTCTTCTATTTCTACCCAGTGCGCTGT
GAATGGTGTGAGTTCCTCACCTGCATCCCCTTCACAGACAAGTTCTGTGAGAAGTACGAGCTGG
ATGCTCAGCTCCATTGAACCAGCGGTGGACACCCCAGGCCACCCCGGCCTCCTGTGGCCGAACA
GACGGGTGCTTCCTGAACACTGACCTCTCGTGCCTCGAGCTCCCGTTGAACCCTCACACTGCTG
GACATTATCATCCGAGTCCCCATGATAACCTTCTAACTACTCCCCCCCCCCTTGACAACCACCT
CAGGTGGTCAATAAATGGACTGGGAGCGTTTTAGCTGCCACTAACGTGAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039085877 ⟹ XP_038941805

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,911,282 - 15,924,214 (+)	NCBI
mRatBN7.2	10	15,406,832 - 15,419,764 (+)	NCBI

RefSeq Acc Id:

XM_039085878 ⟹ XP_038941806

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,911,288 - 15,924,214 (+)	NCBI
mRatBN7.2	10	15,406,832 - 15,419,764 (+)	NCBI

RefSeq Acc Id:

XM_039085879 ⟹ XP_038941807

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,911,305 - 15,924,214 (+)	NCBI
mRatBN7.2	10	15,406,848 - 15,419,765 (+)	NCBI

RefSeq Acc Id:

XM_039085880 ⟹ XP_038941808

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,912,318 - 15,924,214 (+)	NCBI
mRatBN7.2	10	15,407,690 - 15,419,764 (+)	NCBI

RefSeq Acc Id:

XM_039085881 ⟹ XP_038941809

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,911,282 - 15,924,214 (+)	NCBI
mRatBN7.2	10	15,406,832 - 15,419,764 (+)	NCBI

RefSeq Acc Id:

XM_063268948 ⟹ XP_063125018

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,911,288 - 15,924,214 (+)	NCBI

RefSeq Acc Id:

XM_063268949 ⟹ XP_063125019

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,911,316 - 15,924,214 (+)	NCBI

RefSeq Acc Id:

XM_063268950 ⟹ XP_063125020

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,912,319 - 15,924,214 (+)	NCBI

RefSeq Acc Id:

XM_063268951 ⟹ XP_063125021

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	15,912,318 - 15,924,214 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001025205	(Get FASTA)	NCBI Sequence Viewer
	XP_038941805	(Get FASTA)	NCBI Sequence Viewer
	XP_038941806	(Get FASTA)	NCBI Sequence Viewer
	XP_038941807	(Get FASTA)	NCBI Sequence Viewer
	XP_038941808	(Get FASTA)	NCBI Sequence Viewer
	XP_038941809	(Get FASTA)	NCBI Sequence Viewer
	XP_063125018	(Get FASTA)	NCBI Sequence Viewer
	XP_063125019	(Get FASTA)	NCBI Sequence Viewer
	XP_063125020	(Get FASTA)	NCBI Sequence Viewer
	XP_063125021	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH99777	(Get FASTA)	NCBI Sequence Viewer
	EDM04018	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000027965
	ENSRNOP00000027965.3
	ENSRNOP00065012728
GenBank Protein	Q499S9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001025205 ⟸ NM_001030034

- UniProtKB:

Q499S9 (UniProtKB/Swiss-Prot), A6HDB3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSEARRDSTSSLQRKKPPWLKLDIPAVVPPAAEEPSFLQPLRRQAFLRSVSMPAETARVPSPHH
EPRRLALQRQTSITQTIRRGTADWFGVSKDSDSTQKWQRKSIRHCSQRYGKLKPQVIRELDLPS
QDNVSLTSTETPPPLYVGPCQLGMQKIIDPLARGRAFRMADDTADGLSAPHTPVTPGAASLCSF
SSSRSGFNRLPRRRKRESVAKMSFRAAAALVKGRSIRDGTLRRGQRRSFTPASFLEEDMVDFPD
ELDTSFFAREGVLHEELSTYPDEVFESPSEAALKDWEKAPDQADLTGGALDRSELERSHLMLPL
ERGWRKQKEGGTLAPQPKVRLRQEVVSAAGPRRGQRIAVPVRKLFAREKRPYGLGMVGRLTNRT
YRKRIDSYVKRQIEDMDDHRPFFTYWLTFVHSLVTILAVCIYGIAPVGFSQHETVDSVLRKRGV
YENVKYVQQENFWIGPSSEALIHLGAKFSPCMRQDPQVHNFILAAREREKHSACCVRNDRSGCV
QTSKEECSSTLAVWVKWPVHPSAPDLAGNKRQFGSVCHQDPRVCDEPSSEDPHEWPEDITKWPI
CTKNSAGNHTNHPHMDCVITGRPCCIGTKGRCEITSREYCDFMKGYFHEEATLCSQVHCMDDVC
GLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTG
NLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWI
DNFAHISGFVSGLFLSFAFLPYISFGKFDLYRKRCQIIIFQAVFLGLLAGLVVLFYFYPVRCEW
CEFLTCIPFTDKFCEKYELDAQLH

hide sequence

RefSeq Acc Id:

ENSRNOP00000027965 ⟸ ENSRNOT00000027965

RefSeq Acc Id:	XP_038941806 ⟸ XM_039085878
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038941805 ⟸ XM_039085877
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038941809 ⟸ XM_039085881
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038941807 ⟸ XM_039085879
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038941808 ⟸ XM_039085880
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063125018 ⟸ XM_063268948
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063125019 ⟸ XM_063268949
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063125021 ⟸ XM_063268951
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063125020 ⟸ XM_063268950
- Peptide Label:	isoform X3

Protein Domains

Inactive rhomboid protein 1/2 N-terminal Peptidase S54 rhomboid

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q499S9-F1-model_v2	AlphaFold	Q499S9	1-856	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697081

Promoter ID:

EPDNEW_R7604

Type:

initiation region

Name:

Rhbdf1_1

Description:

rhomboid 5 homolog 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	15,672,379 - 15,672,439	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305075	AgrOrtholog
BioCyc Gene	G2FUF-25697	BioCyc
Ensembl Genes	ENSRNOG00000020594	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOG00065010329	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000027965	ENTREZGENE
	ENSRNOT00000027965.5	UniProtKB/Swiss-Prot
	ENSRNOT00065016685	UniProtKB/Swiss-Prot
Gene3D-CATH	1.20.1540.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7933232	IMAGE-MGC_LOAD
InterPro	iRhom1/2	UniProtKB/TrEMBL
	Peptidase_S54_rhomboid_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Rhomboid-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Rhomboid_SP	UniProtKB/Swiss-Prot
KEGG Report	rno:303008	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:124815	IMAGE-MGC_LOAD
NCBI Gene	303008	ENTREZGENE
PANTHER	INACTIVE RHOMBOID PROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	INACTIVE RHOMBOID PROTEIN 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Rhomboid	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Rhomboid_SP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Rhbdf1	PhenoGen
RatGTEx	ENSRNOG00000020594	RatGTEx
	ENSRNOG00065010329	RatGTEx
Superfamily-SCOP	Rhomboid-like	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt	A6HDB3	ENTREZGENE, UniProtKB/TrEMBL
	Q499S9	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-05-18	Rhbdf1	rhomboid 5 homolog 1	Rhbdf1	rhomboid 5 homolog 1 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-11-04	Rhbdf1	rhomboid 5 homolog 1 (Drosophila)	Rhbdf1	rhomboid family 1 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Rhbdf1	rhomboid family 1 (Drosophila)	Rhbdf1_predicted	rhomboid family 1 (Drosophila) (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Rhbdf1_predicted	rhomboid family 1 (Drosophila) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar